Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.13□□□□□ -2.23
TRIM40Q6P9F5 MIR4742-201ENST00000581069 85 ntBASIC1.13□□□□□ -2.23
TRIM40Q6P9F5 AC097065.2-201ENST00000608159 533 ntBASIC1.13□□□□□ -2.23
TRIM40Q6P9F5 AC103591.3-201ENST00000608684 209 ntBASIC1.13□□□□□ -2.23
TRIM40Q6P9F5 AC048344.4-201ENST00000619744 527 ntBASIC1.13□□□□□ -2.23
TRIM40Q6P9F5 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.13□□□□□ -2.23
TRIM40Q6P9F5 AC006504.8-201ENST00000621046 635 ntBASIC1.13□□□□□ -2.23
TRIM40Q6P9F5 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.13□□□□□ -2.23
TRIM40Q6P9F5 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.13□□□□□ -2.23
TRIM40Q6P9F5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
TRIM40Q6P9F5 Y_RNA.135-201ENST00000363439 95 ntBASIC1.12□□□□□ -2.23
TRIM40Q6P9F5 RNU6-392P-201ENST00000364926 101 ntBASIC1.12□□□□□ -2.23
TRIM40Q6P9F5 MIR517A-201ENST00000385001 87 ntBASIC1.12□□□□□ -2.23
TRIM40Q6P9F5 RNA5SP323-201ENST00000391094 133 ntBASIC1.12□□□□□ -2.23
TRIM40Q6P9F5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.12□□□□□ -2.23
TRIM40Q6P9F5 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.12□□□□□ -2.23
TRIM40Q6P9F5 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.12□□□□□ -2.23
TRIM40Q6P9F5 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.12□□□□□ -2.23
TRIM40Q6P9F5 RNU7-34P-201ENST00000459394 64 ntBASIC1.12□□□□□ -2.23
TRIM40Q6P9F5 RNU6-256P-201ENST00000516747 97 ntBASIC1.12□□□□□ -2.23
TRIM40Q6P9F5 RNU6-58P-201ENST00000517143 103 ntBASIC1.12□□□□□ -2.23
TRIM40Q6P9F5 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.12□□□□□ -2.23
TRIM40Q6P9F5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 RNY1P10-201ENST00000363268 113 ntBASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 Y_RNA.319-201ENST00000365138 92 ntBASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 RNU6-1240P-201ENST00000365155 104 ntBASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 RNU6-1065P-201ENST00000384513 106 ntBASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 MIR153-2-201ENST00000385225 87 ntBASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 RNU6-332P-201ENST00000391193 108 ntBASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 AL591704.2-201ENST00000421658 181 ntBASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 MTND3P21-201ENST00000433774 331 ntBASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 MTND2P22-201ENST00000444325 1033 ntBASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 RPS26P45-201ENST00000471748 340 ntBASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 RPL30P7-201ENST00000479312 323 ntBASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 AL163195.1-201ENST00000496941 348 ntBASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 ACA59.1-201ENST00000515966 143 ntBASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 SNORA25.14-201ENST00000516481 132 ntBASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 RNU6-506P-201ENST00000516553 94 ntBASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 AC027288.2-201ENST00000553028 243 ntBASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 AL442163.3-201ENST00000554110 156 ntBASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 MIR3672-201ENST00000584290 82 ntBASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 MIR4781-201ENST00000585250 76 ntBASIC1.11□□□□□ -2.23
TRIM40Q6P9F5 MIR337-201ENST00000362281 93 ntBASIC1.1□□□□□ -2.23
TRIM40Q6P9F5 Y_RNA.4-201ENST00000362333 112 ntBASIC1.1□□□□□ -2.23
TRIM40Q6P9F5 Y_RNA.41-201ENST00000362646 102 ntBASIC1.1□□□□□ -2.23
TRIM40Q6P9F5 Y_RNA.100-201ENST00000363141 102 ntBASIC1.1□□□□□ -2.23
TRIM40Q6P9F5 RNU6-137P-201ENST00000363680 108 ntBASIC1.1□□□□□ -2.23
TRIM40Q6P9F5 Y_RNA.414-201ENST00000384011 101 ntBASIC1.1□□□□□ -2.23
TRIM40Q6P9F5 MIR513A1-201ENST00000385138 129 ntBASIC1.1□□□□□ -2.23
TRIM40Q6P9F5 RNA5SP109-201ENST00000391010 116 ntBASIC1.1□□□□□ -2.23
TRIM40Q6P9F5 RPL21P1-201ENST00000399532 476 ntBASIC1.1□□□□□ -2.23
TRIM40Q6P9F5 RPS27P1-201ENST00000450552 247 ntBASIC1.1□□□□□ -2.23
TRIM40Q6P9F5 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.1□□□□□ -2.23
TRIM40Q6P9F5 NDUFB4P10-201ENST00000452541 359 ntBASIC1.1□□□□□ -2.23
TRIM40Q6P9F5 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.1□□□□□ -2.23
TRIM40Q6P9F5 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.1□□□□□ -2.23
TRIM40Q6P9F5 RNU6-314P-201ENST00000516574 104 ntBASIC1.1□□□□□ -2.23
TRIM40Q6P9F5 RNA5SP454-201ENST00000517231 127 ntBASIC1.1□□□□□ -2.23
TRIM40Q6P9F5 AC245505.1-201ENST00000556398 224 ntBASIC1.1□□□□□ -2.23
TRIM40Q6P9F5 AL050343.2-201ENST00000607338 280 ntBASIC1.1□□□□□ -2.23
TRIM40Q6P9F5 AL359075.3-201ENST00000613288 217 ntBASIC1.1□□□□□ -2.23
TRIM40Q6P9F5 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.1□□□□□ -2.23
TRIM40Q6P9F5 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.1□□□□□ -2.23
TRIM40Q6P9F5 RNU6-1123P-201ENST00000362347 106 ntBASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 Y_RNA.164-201ENST00000363709 102 ntBASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 RNU6-873P-201ENST00000363833 107 ntBASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 RNU6-1090P-201ENST00000364065 94 ntBASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 Y_RNA.212-201ENST00000364177 102 ntBASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 RNU4-24P-201ENST00000364565 139 ntBASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 Y_RNA.517-201ENST00000384551 106 ntBASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 RNU6-950P-201ENST00000384651 107 ntBASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 MIR150-201ENST00000385048 84 ntBASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 AL606517.2-201ENST00000442855 241 ntBASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 RNU1-142P-201ENST00000516682 145 ntBASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 RAB11AP2-201ENST00000545905 639 ntBASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 AL929325.1-201ENST00000603096 117 ntBASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 AC124303.1-201ENST00000605703 360 ntBASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 AL365434.2-201ENST00000607979 234 ntBASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 AF250324.2-201ENST00000608299 610 ntBASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 AC019193.3-201ENST00000609144 554 ntBASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 AC040896.1-201ENST00000613819 479 ntBASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 U6.108-201ENST00000637764 58 ntBASIC1.09□□□□□ -2.23
TRIM40Q6P9F5 MTND4P12-201ENST00000498999 1377 ntBASIC1.08□□□□□ -2.24
TRIM40Q6P9F5 U3.8-201ENST00000363675 217 ntBASIC1.08□□□□□ -2.24
TRIM40Q6P9F5 RNU4-75P-201ENST00000364621 146 ntBASIC1.08□□□□□ -2.24
TRIM40Q6P9F5 SNORD87-201ENST00000364849 89 ntBASIC1.08□□□□□ -2.24
TRIM40Q6P9F5 SNORD116-11-201ENST00000383882 92 ntBASIC1.08□□□□□ -2.24
TRIM40Q6P9F5 MIR1185-2-201ENST00000408687 86 ntBASIC1.08□□□□□ -2.24
TRIM40Q6P9F5 SNX2P2-201ENST00000424553 323 ntBASIC1.08□□□□□ -2.24
TRIM40Q6P9F5 MTCO2P7-201ENST00000446518 666 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms