Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RNU6-159P-201ENST00000391080 106 ntBASIC1.2□□□□□ -2.22
RFX4Q33E94 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.2□□□□□ -2.22
RFX4Q33E94 MTND4LP16-201ENST00000440828 295 ntBASIC1.2□□□□□ -2.22
RFX4Q33E94 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.2□□□□□ -2.22
RFX4Q33E94 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.2□□□□□ -2.22
RFX4Q33E94 RNU6-329P-201ENST00000459618 107 ntBASIC1.2□□□□□ -2.22
RFX4Q33E94 RPL31P58-201ENST00000469001 379 ntBASIC1.2□□□□□ -2.22
RFX4Q33E94 AC114982.1-201ENST00000469402 321 ntBASIC1.2□□□□□ -2.22
RFX4Q33E94 AC091179.3-201ENST00000474761 144 ntBASIC1.2□□□□□ -2.22
RFX4Q33E94 MTND5P5-201ENST00000503764 376 ntBASIC1.2□□□□□ -2.22
RFX4Q33E94 SNORA25.14-201ENST00000516481 132 ntBASIC1.2□□□□□ -2.22
RFX4Q33E94 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.2□□□□□ -2.22
RFX4Q33E94 MIR4303-201ENST00000581299 66 ntBASIC1.2□□□□□ -2.22
RFX4Q33E94 AC018638.8-201ENST00000588755 281 ntBASIC1.2□□□□□ -2.22
RFX4Q33E94 SNORD11B-201ENST00000607707 90 ntBASIC1.2□□□□□ -2.22
RFX4Q33E94 MIR6128-201ENST00000615528 109 ntBASIC1.2□□□□□ -2.22
RFX4Q33E94 AC002553.4-201ENST00000616896 331 ntBASIC1.2□□□□□ -2.22
RFX4Q33E94 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.2□□□□□ -2.22
RFX4Q33E94 AC068137.4-201ENST00000638485 296 ntBASIC1.2□□□□□ -2.22
RFX4Q33E94 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
RFX4Q33E94 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
RFX4Q33E94 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
RFX4Q33E94 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
RFX4Q33E94 RNU6-727P-201ENST00000363592 107 ntBASIC1.19□□□□□ -2.22
RFX4Q33E94 RNU6-595P-201ENST00000363944 107 ntBASIC1.19□□□□□ -2.22
RFX4Q33E94 Y_RNA.415-201ENST00000384012 112 ntBASIC1.19□□□□□ -2.22
RFX4Q33E94 RNU6-417P-201ENST00000384712 107 ntBASIC1.19□□□□□ -2.22
RFX4Q33E94 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.19□□□□□ -2.22
RFX4Q33E94 AL356776.1-201ENST00000406574 447 ntBASIC1.19□□□□□ -2.22
RFX4Q33E94 MIR320B2-201ENST00000408479 138 ntBASIC1.19□□□□□ -2.22
RFX4Q33E94 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.19□□□□□ -2.22
RFX4Q33E94 MTND1P34-201ENST00000438556 671 ntBASIC1.19□□□□□ -2.22
RFX4Q33E94 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.19□□□□□ -2.22
RFX4Q33E94 SNORD5.1-201ENST00000458800 75 ntBASIC1.19□□□□□ -2.22
RFX4Q33E94 snoU13.9-201ENST00000458927 103 ntBASIC1.19□□□□□ -2.22
RFX4Q33E94 AP000870.1-201ENST00000472927 406 ntBASIC1.19□□□□□ -2.22
RFX4Q33E94 Y_RNA.682-201ENST00000516457 100 ntBASIC1.19□□□□□ -2.22
RFX4Q33E94 AC025647.1-201ENST00000517879 253 ntBASIC1.19□□□□□ -2.22
RFX4Q33E94 AP003033.1-201ENST00000527244 415 ntBASIC1.19□□□□□ -2.22
RFX4Q33E94 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.19□□□□□ -2.22
RFX4Q33E94 MIR4790-201ENST00000577799 79 ntBASIC1.19□□□□□ -2.22
RFX4Q33E94 MIR4742-201ENST00000581069 85 ntBASIC1.19□□□□□ -2.22
RFX4Q33E94 AC084782.3-201ENST00000612282 578 ntBASIC1.19□□□□□ -2.22
RFX4Q33E94 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
RFX4Q33E94 AC139792.2-201ENST00000624218 587 ntBASIC1.19□□□□□ -2.22
RFX4Q33E94 AL359757.2-201ENST00000624309 274 ntBASIC1.19□□□□□ -2.22
RFX4Q33E94 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.19□□□□□ -2.22
RFX4Q33E94 snoZ196.1-201ENST00000625269 89 ntBASIC1.19□□□□□ -2.22
RFX4Q33E94 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
RFX4Q33E94 ZNF299P-201ENST00000406845 1804 ntBASIC1.18□□□□□ -2.22
RFX4Q33E94 MIR302D-201ENST00000362275 68 ntBASIC1.18□□□□□ -2.22
RFX4Q33E94 RNU6-271P-201ENST00000363858 105 ntBASIC1.18□□□□□ -2.22
RFX4Q33E94 RNU6-457P-201ENST00000363999 107 ntBASIC1.18□□□□□ -2.22
RFX4Q33E94 Y_RNA.405-201ENST00000383979 100 ntBASIC1.18□□□□□ -2.22
RFX4Q33E94 RNU6-1013P-201ENST00000384180 107 ntBASIC1.18□□□□□ -2.22
RFX4Q33E94 Y_RNA.451-201ENST00000384200 100 ntBASIC1.18□□□□□ -2.22
RFX4Q33E94 Y_RNA.524-201ENST00000384564 100 ntBASIC1.18□□□□□ -2.22
RFX4Q33E94 Y_RNA.561-201ENST00000384694 100 ntBASIC1.18□□□□□ -2.22
RFX4Q33E94 MIR10B-201ENST00000385011 110 ntBASIC1.18□□□□□ -2.22
RFX4Q33E94 RNU6-360P-201ENST00000390944 104 ntBASIC1.18□□□□□ -2.22
RFX4Q33E94 RNA5SP467-201ENST00000391274 118 ntBASIC1.18□□□□□ -2.22
RFX4Q33E94 AL161935.2-201ENST00000414627 60 ntBASIC1.18□□□□□ -2.22
RFX4Q33E94 JTBP1-201ENST00000441314 247 ntBASIC1.18□□□□□ -2.22
RFX4Q33E94 AC245517.4-201ENST00000448601 281 ntBASIC1.18□□□□□ -2.22
RFX4Q33E94 RNU1-123P-201ENST00000458950 160 ntBASIC1.18□□□□□ -2.22
RFX4Q33E94 RNU6-221P-201ENST00000459541 99 ntBASIC1.18□□□□□ -2.22
RFX4Q33E94 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.18□□□□□ -2.22
RFX4Q33E94 CBX3P8-201ENST00000532412 525 ntBASIC1.18□□□□□ -2.22
RFX4Q33E94 MIR4273-201ENST00000582824 84 ntBASIC1.18□□□□□ -2.22
RFX4Q33E94 AC068790.6-201ENST00000602558 258 ntBASIC1.18□□□□□ -2.22
RFX4Q33E94 AP003465.2-201ENST00000602571 373 ntBASIC1.18□□□□□ -2.22
RFX4Q33E94 U6.108-201ENST00000637764 58 ntBASIC1.18□□□□□ -2.22
RFX4Q33E94 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
RFX4Q33E94 ZNF209P-201ENST00000593450 2304 ntBASIC1.17□□□□□ -2.22
RFX4Q33E94 RNU6-222P-201ENST00000362438 107 ntBASIC1.17□□□□□ -2.22
RFX4Q33E94 RNU6-137P-201ENST00000363680 108 ntBASIC1.17□□□□□ -2.22
RFX4Q33E94 RNU6-414P-201ENST00000363705 104 ntBASIC1.17□□□□□ -2.22
RFX4Q33E94 RNU2-7P-201ENST00000410794 178 ntBASIC1.17□□□□□ -2.22
RFX4Q33E94 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.17□□□□□ -2.22
RFX4Q33E94 MTND3P23-201ENST00000431980 347 ntBASIC1.17□□□□□ -2.22
RFX4Q33E94 AL606517.2-201ENST00000442855 241 ntBASIC1.17□□□□□ -2.22
RFX4Q33E94 AC073910.1-201ENST00000445047 438 ntBASIC1.17□□□□□ -2.22
RFX4Q33E94 AC074290.1-201ENST00000448883 135 ntBASIC1.17□□□□□ -2.22
RFX4Q33E94 AC026782.1-201ENST00000512952 449 ntBASIC1.17□□□□□ -2.22
RFX4Q33E94 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.17□□□□□ -2.22
RFX4Q33E94 RNA5SP445-201ENST00000515889 115 ntBASIC1.17□□□□□ -2.22
RFX4Q33E94 RNU1-92P-201ENST00000517017 135 ntBASIC1.17□□□□□ -2.22
RFX4Q33E94 RNU1-54P-201ENST00000517181 120 ntBASIC1.17□□□□□ -2.22
RFX4Q33E94 RNU6-902P-201ENST00000517212 91 ntBASIC1.17□□□□□ -2.22
RFX4Q33E94 AF235103.2-201ENST00000525753 346 ntBASIC1.17□□□□□ -2.22
RFX4Q33E94 AL590705.4-201ENST00000532209 134 ntBASIC1.17□□□□□ -2.22
RFX4Q33E94 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.17□□□□□ -2.22
RFX4Q33E94 AL161670.1-201ENST00000554348 137 ntBASIC1.17□□□□□ -2.22
RFX4Q33E94 MZT1P2-201ENST00000604387 248 ntBASIC1.17□□□□□ -2.22
RFX4Q33E94 AL355802.3-201ENST00000607571 545 ntBASIC1.17□□□□□ -2.22
RFX4Q33E94 AC093913.1-201ENST00000614178 329 ntBASIC1.17□□□□□ -2.22
RFX4Q33E94 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.17□□□□□ -2.22
RFX4Q33E94 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
RFX4Q33E94 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
RFX4Q33E94 AC100821.1-201ENST00000523153 2479 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms