Protein–RNA interactions for Protein: Q08043

ACTN3, Alpha-actinin-3, humanhuman

Predicted RBP Predictions only

Length 901 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN3Q08043 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.42□□□□□ -2.18
ACTN3Q08043 MIR3672-201ENST00000584290 82 ntBASIC1.42□□□□□ -2.18
ACTN3Q08043 AL645939.4-201ENST00000604495 135 ntBASIC1.42□□□□□ -2.18
ACTN3Q08043 AC016727.1-205ENST00000605437 569 ntBASIC1.42□□□□□ -2.18
ACTN3Q08043 AC040896.1-201ENST00000613819 479 ntBASIC1.42□□□□□ -2.18
ACTN3Q08043 AC015540.1-201ENST00000615828 501 ntBASIC1.42□□□□□ -2.18
ACTN3Q08043 SNORA33-201ENST00000363664 130 ntBASIC1.41□□□□□ -2.18
ACTN3Q08043 Y_RNA.212-201ENST00000364177 102 ntBASIC1.41□□□□□ -2.18
ACTN3Q08043 Y_RNA.338-201ENST00000365320 114 ntBASIC1.41□□□□□ -2.18
ACTN3Q08043 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.41□□□□□ -2.18
ACTN3Q08043 SNORD116-11-201ENST00000383882 92 ntBASIC1.41□□□□□ -2.18
ACTN3Q08043 RPL21P1-201ENST00000399532 476 ntBASIC1.41□□□□□ -2.18
ACTN3Q08043 MIR1323-201ENST00000408090 73 ntBASIC1.41□□□□□ -2.18
ACTN3Q08043 MIR1185-2-201ENST00000408687 86 ntBASIC1.41□□□□□ -2.18
ACTN3Q08043 AL590632.1-201ENST00000424289 371 ntBASIC1.41□□□□□ -2.18
ACTN3Q08043 Z82188.1-201ENST00000436709 154 ntBASIC1.41□□□□□ -2.18
ACTN3Q08043 AL442163.3-201ENST00000554110 156 ntBASIC1.41□□□□□ -2.18
ACTN3Q08043 AL161670.1-201ENST00000554348 137 ntBASIC1.41□□□□□ -2.18
ACTN3Q08043 AL137100.2-201ENST00000555786 315 ntBASIC1.41□□□□□ -2.18
ACTN3Q08043 AC068338.1-201ENST00000565567 176 ntBASIC1.41□□□□□ -2.18
ACTN3Q08043 AL050343.2-201ENST00000607338 280 ntBASIC1.41□□□□□ -2.18
ACTN3Q08043 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.41□□□□□ -2.18
ACTN3Q08043 Y_RNA.9-201ENST00000362354 101 ntBASIC1.4□□□□□ -2.19
ACTN3Q08043 RNU6-17P-201ENST00000384245 107 ntBASIC1.4□□□□□ -2.19
ACTN3Q08043 RNU6-18P-201ENST00000384527 107 ntBASIC1.4□□□□□ -2.19
ACTN3Q08043 MIR758-201ENST00000390227 88 ntBASIC1.4□□□□□ -2.19
ACTN3Q08043 FGF7P8-201ENST00000402994 292 ntBASIC1.4□□□□□ -2.19
ACTN3Q08043 RN7SKP200-201ENST00000410564 320 ntBASIC1.4□□□□□ -2.19
ACTN3Q08043 RNA5SP504-201ENST00000410676 117 ntBASIC1.4□□□□□ -2.19
ACTN3Q08043 AC009161.1-201ENST00000417306 376 ntBASIC1.4□□□□□ -2.19
ACTN3Q08043 BTF3P4-201ENST00000418852 495 ntBASIC1.4□□□□□ -2.19
ACTN3Q08043 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.4□□□□□ -2.19
ACTN3Q08043 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.4□□□□□ -2.19
ACTN3Q08043 RPL31P58-201ENST00000469001 379 ntBASIC1.4□□□□□ -2.19
ACTN3Q08043 AC103851.1-201ENST00000506833 274 ntBASIC1.4□□□□□ -2.19
ACTN3Q08043 AC108729.3-201ENST00000513484 108 ntBASIC1.4□□□□□ -2.19
ACTN3Q08043 RNU7-175P-201ENST00000515915 61 ntBASIC1.4□□□□□ -2.19
ACTN3Q08043 Y_RNA.676-201ENST00000516393 96 ntBASIC1.4□□□□□ -2.19
ACTN3Q08043 AC027288.2-201ENST00000553028 243 ntBASIC1.4□□□□□ -2.19
ACTN3Q08043 AC022432.1-201ENST00000595739 310 ntBASIC1.4□□□□□ -2.19
ACTN3Q08043 AL355802.3-201ENST00000607571 545 ntBASIC1.4□□□□□ -2.19
ACTN3Q08043 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.4□□□□□ -2.19
ACTN3Q08043 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.4□□□□□ -2.19
ACTN3Q08043 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
ACTN3Q08043 ZNF209P-201ENST00000593450 2304 ntBASIC1.39□□□□□ -2.19
ACTN3Q08043 MIR26B-201ENST00000362251 77 ntBASIC1.39□□□□□ -2.19
ACTN3Q08043 RNU6-873P-201ENST00000363833 107 ntBASIC1.39□□□□□ -2.19
ACTN3Q08043 RNU6-596P-201ENST00000365395 98 ntBASIC1.39□□□□□ -2.19
ACTN3Q08043 RNU6-1013P-201ENST00000384180 107 ntBASIC1.39□□□□□ -2.19
ACTN3Q08043 RNU6-793P-201ENST00000384233 104 ntBASIC1.39□□□□□ -2.19
ACTN3Q08043 Y_RNA.573-201ENST00000384763 105 ntBASIC1.39□□□□□ -2.19
ACTN3Q08043 RNU6-159P-201ENST00000391080 106 ntBASIC1.39□□□□□ -2.19
ACTN3Q08043 RNU6-174P-201ENST00000410406 106 ntBASIC1.39□□□□□ -2.19
ACTN3Q08043 SDAD1P3-201ENST00000427380 333 ntBASIC1.39□□□□□ -2.19
ACTN3Q08043 AL354695.1-201ENST00000427935 228 ntBASIC1.39□□□□□ -2.19
ACTN3Q08043 SNRPGP13-201ENST00000442212 177 ntBASIC1.39□□□□□ -2.19
ACTN3Q08043 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.39□□□□□ -2.19
ACTN3Q08043 AC134698.4-201ENST00000523451 826 ntBASIC1.39□□□□□ -2.19
ACTN3Q08043 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.39□□□□□ -2.19
ACTN3Q08043 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.39□□□□□ -2.19
ACTN3Q08043 MIR5696-201ENST00000578474 85 ntBASIC1.39□□□□□ -2.19
ACTN3Q08043 MIR4742-201ENST00000581069 85 ntBASIC1.39□□□□□ -2.19
ACTN3Q08043 MIR4273-201ENST00000582824 84 ntBASIC1.39□□□□□ -2.19
ACTN3Q08043 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.39□□□□□ -2.19
ACTN3Q08043 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.39□□□□□ -2.19
ACTN3Q08043 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.39□□□□□ -2.19
ACTN3Q08043 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.39□□□□□ -2.19
ACTN3Q08043 AC068137.4-201ENST00000638485 296 ntBASIC1.39□□□□□ -2.19
ACTN3Q08043 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
ACTN3Q08043 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
ACTN3Q08043 AC091812.1-201ENST00000432235 1948 ntBASIC1.38□□□□□ -2.19
ACTN3Q08043 MTND4P12-201ENST00000498999 1377 ntBASIC1.38□□□□□ -2.19
ACTN3Q08043 Y_RNA.490-201ENST00000384413 102 ntBASIC1.38□□□□□ -2.19
ACTN3Q08043 RNA5SP109-201ENST00000391010 116 ntBASIC1.38□□□□□ -2.19
ACTN3Q08043 RNA5SP118-201ENST00000410385 109 ntBASIC1.38□□□□□ -2.19
ACTN3Q08043 Y_RNA.595-201ENST00000410403 105 ntBASIC1.38□□□□□ -2.19
ACTN3Q08043 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.38□□□□□ -2.19
ACTN3Q08043 AC009474.2-201ENST00000451383 136 ntBASIC1.38□□□□□ -2.19
ACTN3Q08043 RNU7-94P-201ENST00000459576 63 ntBASIC1.38□□□□□ -2.19
ACTN3Q08043 AC093534.1-201ENST00000504977 132 ntBASIC1.38□□□□□ -2.19
ACTN3Q08043 DNAJC19P9-201ENST00000555084 351 ntBASIC1.38□□□□□ -2.19
ACTN3Q08043 AC004584.2-201ENST00000570407 410 ntBASIC1.38□□□□□ -2.19
ACTN3Q08043 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.38□□□□□ -2.19
ACTN3Q08043 AF250324.2-201ENST00000608299 610 ntBASIC1.38□□□□□ -2.19
ACTN3Q08043 MIR8065-201ENST00000620577 100 ntBASIC1.38□□□□□ -2.19
ACTN3Q08043 AC024614.3-201ENST00000637860 256 ntBASIC1.38□□□□□ -2.19
ACTN3Q08043 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
ACTN3Q08043 RNY4P14-201ENST00000363656 96 ntBASIC1.37□□□□□ -2.19
ACTN3Q08043 Y_RNA.179-201ENST00000363844 90 ntBASIC1.37□□□□□ -2.19
ACTN3Q08043 RNA5SP259-201ENST00000365541 109 ntBASIC1.37□□□□□ -2.19
ACTN3Q08043 RPL23AP36-201ENST00000413895 458 ntBASIC1.37□□□□□ -2.19
ACTN3Q08043 USMG5P1-201ENST00000425964 177 ntBASIC1.37□□□□□ -2.19
ACTN3Q08043 MTATP6P13-201ENST00000438531 667 ntBASIC1.37□□□□□ -2.19
ACTN3Q08043 PGBD4P5-201ENST00000445958 426 ntBASIC1.37□□□□□ -2.19
ACTN3Q08043 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.37□□□□□ -2.19
ACTN3Q08043 RNA5SP454-201ENST00000517231 127 ntBASIC1.37□□□□□ -2.19
ACTN3Q08043 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.37□□□□□ -2.19
ACTN3Q08043 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.37□□□□□ -2.19
ACTN3Q08043 AC009248.2-201ENST00000619826 254 ntBASIC1.37□□□□□ -2.19
ACTN3Q08043 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms