Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 MIR5094-201ENST00000578766 85 ntBASIC0.93□□□□□ -2.26
TNFRSF9Q07011 AC005786.1-201ENST00000588553 154 ntBASIC0.93□□□□□ -2.26
TNFRSF9Q07011 AC068790.6-201ENST00000602558 258 ntBASIC0.93□□□□□ -2.26
TNFRSF9Q07011 AC073413.2-201ENST00000604332 360 ntBASIC0.93□□□□□ -2.26
TNFRSF9Q07011 AC007014.2-201ENST00000615581 479 ntBASIC0.93□□□□□ -2.26
TNFRSF9Q07011 AC139792.2-201ENST00000624218 587 ntBASIC0.93□□□□□ -2.26
TNFRSF9Q07011 ZNF204P-201ENST00000416749 2397 ntBASIC0.93□□□□□ -2.26
TNFRSF9Q07011 AL159152.1-201ENST00000635019 2587 ntBASIC0.93□□□□□ -2.26
TNFRSF9Q07011 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
TNFRSF9Q07011 Y_RNA.6-201ENST00000362350 114 ntBASIC0.92□□□□□ -2.26
TNFRSF9Q07011 Y_RNA.116-201ENST00000363292 103 ntBASIC0.92□□□□□ -2.26
TNFRSF9Q07011 Y_RNA.301-201ENST00000364990 103 ntBASIC0.92□□□□□ -2.26
TNFRSF9Q07011 MIR32-201ENST00000384965 70 ntBASIC0.92□□□□□ -2.26
TNFRSF9Q07011 MIR518E-201ENST00000385252 88 ntBASIC0.92□□□□□ -2.26
TNFRSF9Q07011 AC060773.1-201ENST00000421698 310 ntBASIC0.92□□□□□ -2.26
TNFRSF9Q07011 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
TNFRSF9Q07011 AC099677.2-201ENST00000436385 175 ntBASIC0.92□□□□□ -2.26
TNFRSF9Q07011 MTND1P34-201ENST00000438556 671 ntBASIC0.92□□□□□ -2.26
TNFRSF9Q07011 AC016717.1-201ENST00000448918 286 ntBASIC0.92□□□□□ -2.26
TNFRSF9Q07011 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.92□□□□□ -2.26
TNFRSF9Q07011 AC069439.1-201ENST00000494739 167 ntBASIC0.92□□□□□ -2.26
TNFRSF9Q07011 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.92□□□□□ -2.26
TNFRSF9Q07011 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.92□□□□□ -2.26
TNFRSF9Q07011 RNU6-1041P-201ENST00000516254 102 ntBASIC0.92□□□□□ -2.26
TNFRSF9Q07011 RNA5SP102-201ENST00000516865 106 ntBASIC0.92□□□□□ -2.26
TNFRSF9Q07011 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.92□□□□□ -2.26
TNFRSF9Q07011 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.92□□□□□ -2.26
TNFRSF9Q07011 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.92□□□□□ -2.26
TNFRSF9Q07011 AC124303.1-201ENST00000605703 360 ntBASIC0.92□□□□□ -2.26
TNFRSF9Q07011 AC083806.3-201ENST00000614016 455 ntBASIC0.92□□□□□ -2.26
TNFRSF9Q07011 TCL6_2.1-201ENST00000615162 119 ntBASIC0.92□□□□□ -2.26
TNFRSF9Q07011 AL078604.3-201ENST00000615580 211 ntBASIC0.92□□□□□ -2.26
TNFRSF9Q07011 AC002553.4-201ENST00000616896 331 ntBASIC0.92□□□□□ -2.26
TNFRSF9Q07011 AC012676.2-201ENST00000619258 186 ntBASIC0.92□□□□□ -2.26
TNFRSF9Q07011 SCARNA4-201ENST00000629045 128 ntBASIC0.92□□□□□ -2.26
TNFRSF9Q07011 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.92□□□□□ -2.26
TNFRSF9Q07011 AC027514.1-201ENST00000588561 1603 ntBASIC0.92□□□□□ -2.26
TNFRSF9Q07011 BX322639.1-202ENST00000423987 2213 ntBASIC0.92□□□□□ -2.26
TNFRSF9Q07011 AC245060.5-201ENST00000610778 3293 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
TNFRSF9Q07011 MIR96-201ENST00000362288 78 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 RNU6-862P-201ENST00000362804 105 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 RNU6-112P-201ENST00000363599 104 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 Y_RNA.157-201ENST00000363638 102 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 Y_RNA.796-201ENST00000364268 102 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 Y_RNA.269-201ENST00000364685 89 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 Y_RNA.799-201ENST00000364992 102 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 RNU6-296P-201ENST00000384608 107 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 MIR300-201ENST00000401138 83 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 MIR1283-1-201ENST00000408494 87 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 AC009161.1-201ENST00000417306 376 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.91□□□□□ -2.26
TNFRSF9Q07011 USP9YP30-201ENST00000430729 455 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 AL445305.1-201ENST00000432577 575 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.91□□□□□ -2.26
TNFRSF9Q07011 AC009237.7-201ENST00000447357 229 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.91□□□□□ -2.26
TNFRSF9Q07011 AC067942.3-201ENST00000512025 362 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 ACA59.1-201ENST00000515966 143 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 RNU4-49P-201ENST00000516080 140 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 RNA5SP384-201ENST00000516615 116 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 RNU6-566P-201ENST00000516790 107 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 RNA5SP454-201ENST00000517231 127 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.91□□□□□ -2.26
TNFRSF9Q07011 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.91□□□□□ -2.26
TNFRSF9Q07011 MIR5696-201ENST00000578474 85 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 AC006504.8-201ENST00000621046 635 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 AC068205.3-201ENST00000636385 468 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 MTND5P35-201ENST00000557537 1720 ntBASIC0.91□□□□□ -2.26
TNFRSF9Q07011 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.91□□□□□ -2.26
TNFRSF9Q07011 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
TNFRSF9Q07011 Y_RNA.86-201ENST00000363020 111 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 Y_RNA.118-201ENST00000363300 101 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 RNU6-1059P-201ENST00000363752 98 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 Y_RNA.191-201ENST00000363972 113 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 RNU6-1305P-201ENST00000364353 104 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 SNORD1A-201ENST00000364968 72 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 SNORA67.2-201ENST00000384300 149 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 Y_RNA.508-201ENST00000384502 114 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 Y_RNA.533-201ENST00000384596 114 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
TNFRSF9Q07011 MIR1277-201ENST00000408536 78 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 RNA5SP118-201ENST00000410385 109 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 RPS27P16-201ENST00000425758 201 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 MTND1P4-201ENST00000435196 415 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 MTND4LP16-201ENST00000440828 295 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 NFU1P2-201ENST00000448700 469 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 ATP5J2P3-201ENST00000451550 258 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 COX6CP14-201ENST00000469580 174 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 RPL30P10-201ENST00000488148 337 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 HMGN1P13-201ENST00000505795 138 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 AC079140.2-201ENST00000506193 142 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 UBL5P1-201ENST00000507979 193 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.9□□□□□ -2.27
TNFRSF9Q07011 SUMO2P18-201ENST00000518873 252 ntBASIC0.9□□□□□ -2.27
TNFRSF9Q07011 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.9□□□□□ -2.27
TNFRSF9Q07011 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms