Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC074290.1-201ENST00000448883 135 ntBASIC1.64□□□□□ -2.15
GABPAQ06546 AC107399.1-201ENST00000451226 265 ntBASIC1.64□□□□□ -2.15
GABPAQ06546 RPS29P29-201ENST00000456396 171 ntBASIC1.64□□□□□ -2.15
GABPAQ06546 RNU7-57P-201ENST00000459540 60 ntBASIC1.64□□□□□ -2.15
GABPAQ06546 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.64□□□□□ -2.15
GABPAQ06546 HMGN2P9-201ENST00000476875 229 ntBASIC1.64□□□□□ -2.15
GABPAQ06546 RNA5SP384-201ENST00000516615 116 ntBASIC1.64□□□□□ -2.15
GABPAQ06546 RNU6-856P-201ENST00000516959 98 ntBASIC1.64□□□□□ -2.15
GABPAQ06546 HSBP1P1-201ENST00000555205 166 ntBASIC1.64□□□□□ -2.15
GABPAQ06546 SUB1P4-201ENST00000566062 339 ntBASIC1.64□□□□□ -2.15
GABPAQ06546 AC005668.1-201ENST00000571142 476 ntBASIC1.64□□□□□ -2.15
GABPAQ06546 AC018462.2-201ENST00000605375 395 ntBASIC1.64□□□□□ -2.15
GABPAQ06546 AC122108.2-201ENST00000611946 526 ntBASIC1.64□□□□□ -2.15
GABPAQ06546 SNORD115-8-201ENST00000363856 82 ntBASIC1.63□□□□□ -2.15
GABPAQ06546 RNU6-595P-201ENST00000363944 107 ntBASIC1.63□□□□□ -2.15
GABPAQ06546 SNORD115-38-201ENST00000365037 82 ntBASIC1.63□□□□□ -2.15
GABPAQ06546 Y_RNA.327-201ENST00000365201 102 ntBASIC1.63□□□□□ -2.15
GABPAQ06546 RNU6-245P-201ENST00000384020 107 ntBASIC1.63□□□□□ -2.15
GABPAQ06546 RNU6-17P-201ENST00000384245 107 ntBASIC1.63□□□□□ -2.15
GABPAQ06546 RNU6-18P-201ENST00000384527 107 ntBASIC1.63□□□□□ -2.15
GABPAQ06546 MIR586-201ENST00000385035 97 ntBASIC1.63□□□□□ -2.15
GABPAQ06546 AC099677.2-201ENST00000436385 175 ntBASIC1.63□□□□□ -2.15
GABPAQ06546 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.63□□□□□ -2.15
GABPAQ06546 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.63□□□□□ -2.15
GABPAQ06546 AC010409.1-201ENST00000487382 476 ntBASIC1.63□□□□□ -2.15
GABPAQ06546 AC011406.1-201ENST00000512440 370 ntBASIC1.63□□□□□ -2.15
GABPAQ06546 Y_RNA.675-201ENST00000516389 149 ntBASIC1.63□□□□□ -2.15
GABPAQ06546 RNU6-344P-201ENST00000516635 111 ntBASIC1.63□□□□□ -2.15
GABPAQ06546 RNU7-30P-201ENST00000516835 62 ntBASIC1.63□□□□□ -2.15
GABPAQ06546 CBX3P8-201ENST00000532412 525 ntBASIC1.63□□□□□ -2.15
GABPAQ06546 AC027288.2-201ENST00000553028 243 ntBASIC1.63□□□□□ -2.15
GABPAQ06546 UBL5P4-201ENST00000562584 236 ntBASIC1.63□□□□□ -2.15
GABPAQ06546 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.63□□□□□ -2.15
GABPAQ06546 AL078596.1-201ENST00000624856 447 ntBASIC1.63□□□□□ -2.15
GABPAQ06546 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
GABPAQ06546 RNU6-873P-201ENST00000363833 107 ntBASIC1.62□□□□□ -2.15
GABPAQ06546 RNU1-96P-201ENST00000364163 162 ntBASIC1.62□□□□□ -2.15
GABPAQ06546 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
GABPAQ06546 RNU6-1235P-201ENST00000384559 107 ntBASIC1.62□□□□□ -2.15
GABPAQ06546 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.62□□□□□ -2.15
GABPAQ06546 RNU6-1050P-201ENST00000410388 107 ntBASIC1.62□□□□□ -2.15
GABPAQ06546 RNU6-57P-201ENST00000411348 103 ntBASIC1.62□□□□□ -2.15
GABPAQ06546 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.62□□□□□ -2.15
GABPAQ06546 MTND1P2-201ENST00000430604 821 ntBASIC1.62□□□□□ -2.15
GABPAQ06546 MTCO3P29-201ENST00000432119 779 ntBASIC1.62□□□□□ -2.15
GABPAQ06546 RNU6-498P-201ENST00000459468 107 ntBASIC1.62□□□□□ -2.15
GABPAQ06546 AC026782.1-201ENST00000512952 449 ntBASIC1.62□□□□□ -2.15
GABPAQ06546 AC046134.1-201ENST00000514454 666 ntBASIC1.62□□□□□ -2.15
GABPAQ06546 RNU2-34P-201ENST00000516534 121 ntBASIC1.62□□□□□ -2.15
GABPAQ06546 SNORA31.17-201ENST00000516953 127 ntBASIC1.62□□□□□ -2.15
GABPAQ06546 RNU1-92P-201ENST00000517017 135 ntBASIC1.62□□□□□ -2.15
GABPAQ06546 AC134698.4-201ENST00000523451 826 ntBASIC1.62□□□□□ -2.15
GABPAQ06546 AC084364.2-201ENST00000546924 395 ntBASIC1.62□□□□□ -2.15
GABPAQ06546 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.62□□□□□ -2.15
GABPAQ06546 AC022254.1-201ENST00000567857 235 ntBASIC1.62□□□□□ -2.15
GABPAQ06546 MIR3660-201ENST00000584845 100 ntBASIC1.62□□□□□ -2.15
GABPAQ06546 AC010900.2-201ENST00000604508 210 ntBASIC1.62□□□□□ -2.15
GABPAQ06546 SNORD11B-201ENST00000607707 90 ntBASIC1.62□□□□□ -2.15
GABPAQ06546 AC126177.8-201ENST00000618339 1015 ntBASIC1.62□□□□□ -2.15
GABPAQ06546 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
GABPAQ06546 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
GABPAQ06546 RNU6-727P-201ENST00000363592 107 ntBASIC1.61□□□□□ -2.15
GABPAQ06546 SNORA67.2-201ENST00000384300 149 ntBASIC1.61□□□□□ -2.15
GABPAQ06546 RNU6-601P-201ENST00000384540 107 ntBASIC1.61□□□□□ -2.15
GABPAQ06546 MT-TL1-201ENST00000386347 75 ntBASIC1.61□□□□□ -2.15
GABPAQ06546 RNU6-159P-201ENST00000391080 106 ntBASIC1.61□□□□□ -2.15
GABPAQ06546 Y_RNA.594-201ENST00000410373 140 ntBASIC1.61□□□□□ -2.15
GABPAQ06546 RPS20P15-201ENST00000412792 311 ntBASIC1.61□□□□□ -2.15
GABPAQ06546 RPL37P10-201ENST00000412884 288 ntBASIC1.61□□□□□ -2.15
GABPAQ06546 USMG5P1-201ENST00000425964 177 ntBASIC1.61□□□□□ -2.15
GABPAQ06546 SNRPGP13-201ENST00000442212 177 ntBASIC1.61□□□□□ -2.15
GABPAQ06546 AP000870.1-201ENST00000472927 406 ntBASIC1.61□□□□□ -2.15
GABPAQ06546 AC004223.1-201ENST00000479840 271 ntBASIC1.61□□□□□ -2.15
GABPAQ06546 Y_RNA.670-201ENST00000516255 105 ntBASIC1.61□□□□□ -2.15
GABPAQ06546 RNU6-1016P-201ENST00000516689 94 ntBASIC1.61□□□□□ -2.15
GABPAQ06546 AP003033.1-201ENST00000527244 415 ntBASIC1.61□□□□□ -2.15
GABPAQ06546 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.61□□□□□ -2.15
GABPAQ06546 AC103810.8-201ENST00000607347 118 ntBASIC1.61□□□□□ -2.15
GABPAQ06546 AL355802.3-201ENST00000607571 545 ntBASIC1.61□□□□□ -2.15
GABPAQ06546 AL353770.2-201ENST00000620024 78 ntBASIC1.61□□□□□ -2.15
GABPAQ06546 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.61□□□□□ -2.15
GABPAQ06546 AC006001.4-201ENST00000622243 395 ntBASIC1.61□□□□□ -2.15
GABPAQ06546 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.61□□□□□ -2.15
GABPAQ06546 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
GABPAQ06546 RNU6-112P-201ENST00000363599 104 ntBASIC1.6□□□□□ -2.15
GABPAQ06546 RNU6-137P-201ENST00000363680 108 ntBASIC1.6□□□□□ -2.15
GABPAQ06546 RNU6-280P-201ENST00000364145 104 ntBASIC1.6□□□□□ -2.15
GABPAQ06546 SNORD87-201ENST00000364849 89 ntBASIC1.6□□□□□ -2.15
GABPAQ06546 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
GABPAQ06546 RNU2-7P-201ENST00000410794 178 ntBASIC1.6□□□□□ -2.15
GABPAQ06546 AC007098.1-201ENST00000420122 367 ntBASIC1.6□□□□□ -2.15
GABPAQ06546 AC023790.1-201ENST00000482174 347 ntBASIC1.6□□□□□ -2.15
GABPAQ06546 Y_RNA.706-201ENST00000516933 99 ntBASIC1.6□□□□□ -2.15
GABPAQ06546 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.6□□□□□ -2.15
GABPAQ06546 AC100812.1-201ENST00000607622 580 ntBASIC1.6□□□□□ -2.15
GABPAQ06546 MIR8070-201ENST00000616510 88 ntBASIC1.6□□□□□ -2.15
GABPAQ06546 AP000648.3-201ENST00000623539 4507 ntBASIC1.6□□□□□ -2.15
GABPAQ06546 MTND4P12-201ENST00000498999 1377 ntBASIC1.59□□□□□ -2.15
GABPAQ06546 RNU6-845P-201ENST00000362578 103 ntBASIC1.59□□□□□ -2.15
GABPAQ06546 RNU1-62P-201ENST00000362599 164 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms