Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 AL356776.1-201ENST00000406574 447 ntBASIC1.84□□□□□ -2.11
CALD1Q05682 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.84□□□□□ -2.11
CALD1Q05682 CST2P1-201ENST00000425770 87 ntBASIC1.84□□□□□ -2.11
CALD1Q05682 HMGN2P34-201ENST00000437647 269 ntBASIC1.84□□□□□ -2.11
CALD1Q05682 MTND5P5-201ENST00000503764 376 ntBASIC1.84□□□□□ -2.11
CALD1Q05682 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.84□□□□□ -2.11
CALD1Q05682 AC025465.3-201ENST00000510570 311 ntBASIC1.84□□□□□ -2.11
CALD1Q05682 DNAJC19P9-201ENST00000555084 351 ntBASIC1.84□□□□□ -2.11
CALD1Q05682 MIR3198-2-201ENST00000577868 80 ntBASIC1.84□□□□□ -2.11
CALD1Q05682 BNIP3P10-201ENST00000605360 577 ntBASIC1.84□□□□□ -2.11
CALD1Q05682 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.84□□□□□ -2.11
CALD1Q05682 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.84□□□□□ -2.11
CALD1Q05682 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CALD1Q05682 ZNF299P-201ENST00000406845 1804 ntBASIC1.83□□□□□ -2.12
CALD1Q05682 Y_RNA.140-201ENST00000363474 103 ntBASIC1.83□□□□□ -2.12
CALD1Q05682 Y_RNA.405-201ENST00000383979 100 ntBASIC1.83□□□□□ -2.12
CALD1Q05682 Y_RNA.415-201ENST00000384012 112 ntBASIC1.83□□□□□ -2.12
CALD1Q05682 Y_RNA.451-201ENST00000384200 100 ntBASIC1.83□□□□□ -2.12
CALD1Q05682 Y_RNA.524-201ENST00000384564 100 ntBASIC1.83□□□□□ -2.12
CALD1Q05682 Y_RNA.561-201ENST00000384694 100 ntBASIC1.83□□□□□ -2.12
CALD1Q05682 RNU6-417P-201ENST00000384712 107 ntBASIC1.83□□□□□ -2.12
CALD1Q05682 RNU6-192P-201ENST00000391253 100 ntBASIC1.83□□□□□ -2.12
CALD1Q05682 AC016909.1-201ENST00000415916 166 ntBASIC1.83□□□□□ -2.12
CALD1Q05682 RN7SKP210-201ENST00000459176 261 ntBASIC1.83□□□□□ -2.12
CALD1Q05682 AP000870.1-201ENST00000472927 406 ntBASIC1.83□□□□□ -2.12
CALD1Q05682 HMGN1P13-201ENST00000505795 138 ntBASIC1.83□□□□□ -2.12
CALD1Q05682 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.83□□□□□ -2.12
CALD1Q05682 RNU6-1198P-201ENST00000516904 67 ntBASIC1.83□□□□□ -2.12
CALD1Q05682 AF235103.2-201ENST00000525753 346 ntBASIC1.83□□□□□ -2.12
CALD1Q05682 AL590705.4-201ENST00000532209 134 ntBASIC1.83□□□□□ -2.12
CALD1Q05682 AL160236.1-201ENST00000556317 195 ntBASIC1.83□□□□□ -2.12
CALD1Q05682 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.83□□□□□ -2.12
CALD1Q05682 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.83□□□□□ -2.12
CALD1Q05682 7SK.7-201ENST00000603504 247 ntBASIC1.83□□□□□ -2.12
CALD1Q05682 snoZ196.1-201ENST00000625269 89 ntBASIC1.83□□□□□ -2.12
CALD1Q05682 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
CALD1Q05682 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.82□□□□□ -2.12
CALD1Q05682 MIR378A-201ENST00000362177 66 ntBASIC1.82□□□□□ -2.12
CALD1Q05682 RNU6-414P-201ENST00000363705 104 ntBASIC1.82□□□□□ -2.12
CALD1Q05682 RNU6-596P-201ENST00000365395 98 ntBASIC1.82□□□□□ -2.12
CALD1Q05682 RNU6-338P-201ENST00000383888 105 ntBASIC1.82□□□□□ -2.12
CALD1Q05682 MIR548F5-201ENST00000408421 86 ntBASIC1.82□□□□□ -2.12
CALD1Q05682 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.82□□□□□ -2.12
CALD1Q05682 RNU7-95P-201ENST00000459222 64 ntBASIC1.82□□□□□ -2.12
CALD1Q05682 AC091179.3-201ENST00000474761 144 ntBASIC1.82□□□□□ -2.12
CALD1Q05682 CBX3P8-201ENST00000532412 525 ntBASIC1.82□□□□□ -2.12
CALD1Q05682 AC060780.3-201ENST00000589464 80 ntBASIC1.82□□□□□ -2.12
CALD1Q05682 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.82□□□□□ -2.12
CALD1Q05682 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
CALD1Q05682 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CALD1Q05682 RNU6-595P-201ENST00000363944 107 ntBASIC1.81□□□□□ -2.12
CALD1Q05682 SNORA63D-201ENST00000364359 132 ntBASIC1.81□□□□□ -2.12
CALD1Q05682 RNU6-159P-201ENST00000391080 106 ntBASIC1.81□□□□□ -2.12
CALD1Q05682 RNU6-510P-201ENST00000391239 108 ntBASIC1.81□□□□□ -2.12
CALD1Q05682 AP1B1P2-201ENST00000416196 106 ntBASIC1.81□□□□□ -2.12
CALD1Q05682 EBAG9P1-201ENST00000418955 543 ntBASIC1.81□□□□□ -2.12
CALD1Q05682 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.81□□□□□ -2.12
CALD1Q05682 AC009474.2-201ENST00000451383 136 ntBASIC1.81□□□□□ -2.12
CALD1Q05682 SNORD5.1-201ENST00000458800 75 ntBASIC1.81□□□□□ -2.12
CALD1Q05682 RNU7-175P-201ENST00000515915 61 ntBASIC1.81□□□□□ -2.12
CALD1Q05682 RNU1-92P-201ENST00000517017 135 ntBASIC1.81□□□□□ -2.12
CALD1Q05682 AC134698.4-201ENST00000523451 826 ntBASIC1.81□□□□□ -2.12
CALD1Q05682 AK6P2-201ENST00000549020 471 ntBASIC1.81□□□□□ -2.12
CALD1Q05682 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.81□□□□□ -2.12
CALD1Q05682 AL355802.3-201ENST00000607571 545 ntBASIC1.81□□□□□ -2.12
CALD1Q05682 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.81□□□□□ -2.12
CALD1Q05682 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.81□□□□□ -2.12
CALD1Q05682 RNU6-222P-201ENST00000362438 107 ntBASIC1.8□□□□□ -2.12
CALD1Q05682 RNA5SP432-201ENST00000362480 116 ntBASIC1.8□□□□□ -2.12
CALD1Q05682 RNU1-62P-201ENST00000362599 164 ntBASIC1.8□□□□□ -2.12
CALD1Q05682 Y_RNA.287-201ENST00000364853 94 ntBASIC1.8□□□□□ -2.12
CALD1Q05682 MIR10B-201ENST00000385011 110 ntBASIC1.8□□□□□ -2.12
CALD1Q05682 MIR1253-201ENST00000408273 105 ntBASIC1.8□□□□□ -2.12
CALD1Q05682 MIR1267-201ENST00000408723 78 ntBASIC1.8□□□□□ -2.12
CALD1Q05682 BTF3P4-201ENST00000418852 495 ntBASIC1.8□□□□□ -2.12
CALD1Q05682 MTND3P23-201ENST00000431980 347 ntBASIC1.8□□□□□ -2.12
CALD1Q05682 RPS3AP52-201ENST00000435639 297 ntBASIC1.8□□□□□ -2.12
CALD1Q05682 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.8□□□□□ -2.12
CALD1Q05682 RPL36AP21-201ENST00000490372 323 ntBASIC1.8□□□□□ -2.12
CALD1Q05682 AC018710.1-201ENST00000506509 158 ntBASIC1.8□□□□□ -2.12
CALD1Q05682 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.8□□□□□ -2.12
CALD1Q05682 MIR5695-201ENST00000579717 85 ntBASIC1.8□□□□□ -2.12
CALD1Q05682 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.8□□□□□ -2.12
CALD1Q05682 AC098679.4-201ENST00000624241 654 ntBASIC1.8□□□□□ -2.12
CALD1Q05682 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.8□□□□□ -2.12
CALD1Q05682 AC100821.1-201ENST00000523153 2479 ntBASIC1.8□□□□□ -2.12
CALD1Q05682 RNA5SP467-201ENST00000391274 118 ntBASIC1.79□□□□□ -2.12
CALD1Q05682 RNU6-955P-201ENST00000410497 104 ntBASIC1.79□□□□□ -2.12
CALD1Q05682 MTND3P8-201ENST00000412909 339 ntBASIC1.79□□□□□ -2.12
CALD1Q05682 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.79□□□□□ -2.12
CALD1Q05682 AC073910.1-201ENST00000445047 438 ntBASIC1.79□□□□□ -2.12
CALD1Q05682 AC112492.4-201ENST00000456549 352 ntBASIC1.79□□□□□ -2.12
CALD1Q05682 RNU6-221P-201ENST00000459541 99 ntBASIC1.79□□□□□ -2.12
CALD1Q05682 RPL26P26-201ENST00000480251 434 ntBASIC1.79□□□□□ -2.12
CALD1Q05682 AC026782.1-201ENST00000512952 449 ntBASIC1.79□□□□□ -2.12
CALD1Q05682 RNU6-1016P-201ENST00000516689 94 ntBASIC1.79□□□□□ -2.12
CALD1Q05682 AC025647.1-201ENST00000517879 253 ntBASIC1.79□□□□□ -2.12
CALD1Q05682 MIR4421-201ENST00000578133 69 ntBASIC1.79□□□□□ -2.12
CALD1Q05682 AC018462.2-201ENST00000605375 395 ntBASIC1.79□□□□□ -2.12
CALD1Q05682 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms