Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC018448.1-201ENST00000552843 316 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.08□□□□□ -2.42
ABCA4P78363 AC011195.1-201ENST00000578177 177 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 MIR548AD-201ENST00000584780 82 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.08□□□□□ -2.42
ABCA4P78363 AC097478.2-201ENST00000610572 514 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 AL136317.1-201ENST00000612653 226 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 AL356596.1-201ENST00000624230 379 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 OR5AK4P-201ENST00000635912 903 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 RNA5SP264-201ENST00000363115 107 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 RNU6-723P-201ENST00000383973 107 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 RNU6-378P-201ENST00000384324 107 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 RNU6-417P-201ENST00000384712 107 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 RNU6-57P-201ENST00000411348 103 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.08□□□□□ -2.42
ABCA4P78363 AC007215.1-201ENST00000464893 276 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 AL163973.1-201ENST00000484753 577 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.08□□□□□ -2.42
ABCA4P78363 AP003716.2-201ENST00000528260 108 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 MTND3P13-201ENST00000574391 343 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 AL390123.1-201ENST00000603216 237 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 AL158042.1-201ENST00000605338 460 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 AL355073.2-201ENST00000612106 557 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 AL354696.1-201ENST00000614652 497 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 AC098679.4-201ENST00000624241 654 ntBASIC-0.08□□□□□ -2.42
ABCA4P78363 SNORD14C-201ENST00000365382 88 ntBASIC-0.09□□□□□ -2.42
ABCA4P78363 MIR501-201ENST00000390204 84 ntBASIC-0.09□□□□□ -2.42
ABCA4P78363 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
ABCA4P78363 MTND3P20-201ENST00000407663 186 ntBASIC-0.09□□□□□ -2.42
ABCA4P78363 RNU2-8P-201ENST00000410727 190 ntBASIC-0.09□□□□□ -2.42
ABCA4P78363 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.09□□□□□ -2.42
ABCA4P78363 AL512326.2-201ENST00000426359 151 ntBASIC-0.09□□□□□ -2.42
ABCA4P78363 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.09□□□□□ -2.42
ABCA4P78363 CALM2P4-201ENST00000430810 426 ntBASIC-0.09□□□□□ -2.42
ABCA4P78363 HSFY7P-201ENST00000432672 318 ntBASIC-0.09□□□□□ -2.42
ABCA4P78363 HSFY8P-201ENST00000437934 318 ntBASIC-0.09□□□□□ -2.42
ABCA4P78363 MTCO1P19-201ENST00000443487 500 ntBASIC-0.09□□□□□ -2.42
ABCA4P78363 TPT1P7-201ENST00000458300 517 ntBASIC-0.09□□□□□ -2.42
ABCA4P78363 RPS3AP17-201ENST00000472594 777 ntBASIC-0.09□□□□□ -2.42
ABCA4P78363 MTATP6P9-201ENST00000515039 680 ntBASIC-0.09□□□□□ -2.42
ABCA4P78363 RNU6-948P-201ENST00000516374 107 ntBASIC-0.09□□□□□ -2.42
ABCA4P78363 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.09□□□□□ -2.42
ABCA4P78363 RNU6-448P-201ENST00000517052 107 ntBASIC-0.09□□□□□ -2.42
ABCA4P78363 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
ABCA4P78363 AC023157.2-201ENST00000540596 141 ntBASIC-0.09□□□□□ -2.42
ABCA4P78363 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.09□□□□□ -2.42
ABCA4P78363 AC104695.3-201ENST00000604052 296 ntBASIC-0.09□□□□□ -2.42
ABCA4P78363 AC006927.2-201ENST00000639256 389 ntBASIC-0.09□□□□□ -2.42
ABCA4P78363 MIR891A-201ENST00000401237 79 ntBASIC-0.1□□□□□ -2.42
ABCA4P78363 SNORD111-201ENST00000408139 94 ntBASIC-0.1□□□□□ -2.42
ABCA4P78363 RNU4-63P-201ENST00000411313 118 ntBASIC-0.1□□□□□ -2.42
ABCA4P78363 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.1□□□□□ -2.42
ABCA4P78363 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.1□□□□□ -2.42
ABCA4P78363 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.1□□□□□ -2.42
ABCA4P78363 RN7SKP12-201ENST00000516275 143 ntBASIC-0.1□□□□□ -2.42
ABCA4P78363 RN7SKP287-201ENST00000516546 266 ntBASIC-0.1□□□□□ -2.42
ABCA4P78363 RNU6-334P-201ENST00000517072 102 ntBASIC-0.1□□□□□ -2.42
ABCA4P78363 OR8K2P-201ENST00000524645 927 ntBASIC-0.1□□□□□ -2.42
ABCA4P78363 AF235103.2-201ENST00000525753 346 ntBASIC-0.1□□□□□ -2.42
ABCA4P78363 AC087894.1-201ENST00000538359 518 ntBASIC-0.1□□□□□ -2.42
ABCA4P78363 RPL21P9-201ENST00000556149 474 ntBASIC-0.1□□□□□ -2.42
ABCA4P78363 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.1□□□□□ -2.42
ABCA4P78363 MIR635-201ENST00000384830 98 ntBASIC-0.1□□□□□ -2.43
ABCA4P78363 RNU6-269P-201ENST00000391077 97 ntBASIC-0.1□□□□□ -2.43
ABCA4P78363 SNORD71-201ENST00000411292 86 ntBASIC-0.1□□□□□ -2.43
ABCA4P78363 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-0.1□□□□□ -2.43
ABCA4P78363 AC091021.1-201ENST00000468051 388 ntBASIC-0.1□□□□□ -2.43
ABCA4P78363 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.1□□□□□ -2.43
ABCA4P78363 RNU6-751P-201ENST00000516382 101 ntBASIC-0.1□□□□□ -2.43
ABCA4P78363 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.1□□□□□ -2.43
ABCA4P78363 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
ABCA4P78363 Z94722.1-201ENST00000604328 474 ntBASIC-0.1□□□□□ -2.43
ABCA4P78363 AC108747.1-201ENST00000609508 535 ntBASIC-0.1□□□□□ -2.43
ABCA4P78363 AC006441.5-201ENST00000612680 209 ntBASIC-0.1□□□□□ -2.43
ABCA4P78363 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.1□□□□□ -2.43
ABCA4P78363 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.1□□□□□ -2.43
ABCA4P78363 RNU6-462P-201ENST00000362659 105 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 RNU6-674P-201ENST00000363831 107 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 SNORA40.2-201ENST00000390847 128 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 AC004866.1-201ENST00000411748 78 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 MTCO2P8-201ENST00000412213 658 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 MCFD2P1-201ENST00000417812 300 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 ZNF885P-201ENST00000420174 1098 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 MTCYBP10-201ENST00000424905 650 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 SNAP23P1-201ENST00000433229 246 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 RNU7-56P-201ENST00000458744 62 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 AC016632.1-201ENST00000503994 196 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.11□□□□□ -2.43
ABCA4P78363 AC006380.1-201ENST00000603598 186 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.11□□□□□ -2.43
ABCA4P78363 snoZ196.1-201ENST00000625269 89 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 AL445523.1-201ENST00000451184 1362 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 SNORD114-14-201ENST00000362723 75 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 RNU6-960P-201ENST00000364056 120 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 U8.5-201ENST00000364528 136 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 RNA5SP517-201ENST00000364724 117 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms