Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC007283.2-201ENST00000424739 197 ntBASIC-2.14□□□□□ -2.75
RPL39P62891 FO393419.3-201ENST00000428741 282 ntBASIC-2.14□□□□□ -2.75
RPL39P62891 RNU7-73P-201ENST00000458743 63 ntBASIC-2.14□□□□□ -2.75
RPL39P62891 BX322639.1-202ENST00000423987 2213 ntBASIC-2.15□□□□□ -2.75
RPL39P62891 RNU6-796P-201ENST00000391086 107 ntBASIC-2.15□□□□□ -2.75
RPL39P62891 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-2.15□□□□□ -2.75
RPL39P62891 MTND1P31-201ENST00000449206 961 ntBASIC-2.15□□□□□ -2.75
RPL39P62891 TMEM251P1-201ENST00000503717 318 ntBASIC-2.15□□□□□ -2.75
RPL39P62891 AC046134.1-201ENST00000514454 666 ntBASIC-2.15□□□□□ -2.75
RPL39P62891 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-2.15□□□□□ -2.75
RPL39P62891 PCMTD1P2-201ENST00000565017 355 ntBASIC-2.15□□□□□ -2.75
RPL39P62891 AL118556.2-201ENST00000614375 824 ntBASIC-2.15□□□□□ -2.75
RPL39P62891 AC005609.4-201ENST00000625071 447 ntBASIC-2.15□□□□□ -2.75
RPL39P62891 Y_RNA.1-201ENST00000352915 104 ntBASIC-2.16□□□□□ -2.76
RPL39P62891 Y_RNA.6-201ENST00000362350 114 ntBASIC-2.16□□□□□ -2.76
RPL39P62891 RNU4-21P-201ENST00000362802 126 ntBASIC-2.16□□□□□ -2.76
RPL39P62891 Y_RNA.150-201ENST00000363562 102 ntBASIC-2.16□□□□□ -2.76
RPL39P62891 Y_RNA.457-201ENST00000384237 111 ntBASIC-2.16□□□□□ -2.76
RPL39P62891 RNU6-932P-201ENST00000391108 106 ntBASIC-2.16□□□□□ -2.76
RPL39P62891 HLA-S-202ENST00000425174 53 ntBASIC-2.16□□□□□ -2.76
RPL39P62891 LAMTOR3P2-201ENST00000504479 232 ntBASIC-2.16□□□□□ -2.76
RPL39P62891 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-2.16□□□□□ -2.76
RPL39P62891 RNU6-448P-201ENST00000517052 107 ntBASIC-2.16□□□□□ -2.76
RPL39P62891 AC006600.1-201ENST00000572529 153 ntBASIC-2.16□□□□□ -2.76
RPL39P62891 AC090617.3-201ENST00000573670 475 ntBASIC-2.16□□□□□ -2.76
RPL39P62891 AC092656.1-203ENST00000624134 423 ntBASIC-2.16□□□□□ -2.76
RPL39P62891 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-2.17□□□□□ -2.76
RPL39P62891 HIGD1AP15-201ENST00000416198 280 ntBASIC-2.17□□□□□ -2.76
RPL39P62891 AL627311.1-201ENST00000431514 115 ntBASIC-2.17□□□□□ -2.76
RPL39P62891 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-2.17□□□□□ -2.76
RPL39P62891 RNU7-102P-201ENST00000458948 62 ntBASIC-2.17□□□□□ -2.76
RPL39P62891 MIR2115-201ENST00000516657 100 ntBASIC-2.17□□□□□ -2.76
RPL39P62891 RNA5SP47-201ENST00000517230 109 ntBASIC-2.17□□□□□ -2.76
RPL39P62891 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-2.17□□□□□ -2.76
RPL39P62891 AC004217.3-201ENST00000551552 878 ntBASIC-2.17□□□□□ -2.76
RPL39P62891 AC011458.1-201ENST00000604034 617 ntBASIC-2.17□□□□□ -2.76
RPL39P62891 AL158211.4-201ENST00000606988 584 ntBASIC-2.17□□□□□ -2.76
RPL39P62891 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-2.17□□□□□ -2.76
RPL39P62891 Y_RNA.336-201ENST00000365307 109 ntBASIC-2.18□□□□□ -2.76
RPL39P62891 RNU6-721P-201ENST00000410155 105 ntBASIC-2.18□□□□□ -2.76
RPL39P62891 RNU6-447P-201ENST00000410293 104 ntBASIC-2.18□□□□□ -2.76
RPL39P62891 RNU6-1118P-201ENST00000410382 104 ntBASIC-2.18□□□□□ -2.76
RPL39P62891 RNU6-1076P-201ENST00000410397 104 ntBASIC-2.18□□□□□ -2.76
RPL39P62891 RNU6-355P-201ENST00000410427 104 ntBASIC-2.18□□□□□ -2.76
RPL39P62891 RNU6-791P-201ENST00000410467 104 ntBASIC-2.18□□□□□ -2.76
RPL39P62891 RNU6-1100P-201ENST00000410691 104 ntBASIC-2.18□□□□□ -2.76
RPL39P62891 RNU6-860P-201ENST00000410860 104 ntBASIC-2.18□□□□□ -2.76
RPL39P62891 RNU6-1217P-201ENST00000411276 104 ntBASIC-2.18□□□□□ -2.76
RPL39P62891 RNU6-785P-201ENST00000411324 104 ntBASIC-2.18□□□□□ -2.76
RPL39P62891 CDK8P2-201ENST00000415020 547 ntBASIC-2.18□□□□□ -2.76
RPL39P62891 XACT-201ENST00000468762 497 ntTSL 5 BASIC-2.18□□□□□ -2.76
RPL39P62891 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-2.18□□□□□ -2.76
RPL39P62891 RNU7-12P-201ENST00000516030 62 ntBASIC-2.18□□□□□ -2.76
RPL39P62891 RNA5SP33-201ENST00000516687 98 ntBASIC-2.18□□□□□ -2.76
RPL39P62891 AP000942.4-201ENST00000604811 241 ntBASIC-2.18□□□□□ -2.76
RPL39P62891 SNORA28-201ENST00000606769 126 ntBASIC-2.18□□□□□ -2.76
RPL39P62891 U6.90-201ENST00000614007 104 ntBASIC-2.18□□□□□ -2.76
RPL39P62891 U6.70-201ENST00000620287 104 ntBASIC-2.18□□□□□ -2.76
RPL39P62891 RNU6-1157P-201ENST00000384456 106 ntBASIC-2.19□□□□□ -2.76
RPL39P62891 MIR215-201ENST00000384858 110 ntBASIC-2.19□□□□□ -2.76
RPL39P62891 MIR526A1-201ENST00000384897 85 ntBASIC-2.19□□□□□ -2.76
RPL39P62891 CALM2P4-201ENST00000430810 426 ntBASIC-2.19□□□□□ -2.76
RPL39P62891 MTND1P33-201ENST00000446251 917 ntBASIC-2.19□□□□□ -2.76
RPL39P62891 AL606517.1-201ENST00000446914 387 ntBASIC-2.19□□□□□ -2.76
RPL39P62891 RNA5SP180-201ENST00000516181 101 ntBASIC-2.19□□□□□ -2.76
RPL39P62891 RNU6-1146P-201ENST00000516282 102 ntBASIC-2.19□□□□□ -2.76
RPL39P62891 AC026421.1-201ENST00000519101 163 ntBASIC-2.19□□□□□ -2.76
RPL39P62891 RPL21P9-201ENST00000556149 474 ntBASIC-2.19□□□□□ -2.76
RPL39P62891 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-2.19□□□□□ -2.76
RPL39P62891 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-2.19□□□□□ -2.76
RPL39P62891 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-2.19□□□□□ -2.76
RPL39P62891 AC084368.1-201ENST00000620935 65 ntBASIC-2.19□□□□□ -2.76
RPL39P62891 AC092608.3-201ENST00000625017 386 ntBASIC-2.19□□□□□ -2.76
RPL39P62891 MIR377-201ENST00000362145 69 ntBASIC-2.2□□□□□ -2.76
RPL39P62891 RNU6-512P-201ENST00000364438 103 ntBASIC-2.2□□□□□ -2.76
RPL39P62891 Y_RNA.410-201ENST00000383992 113 ntBASIC-2.2□□□□□ -2.76
RPL39P62891 Y_RNA.537-201ENST00000384626 109 ntBASIC-2.2□□□□□ -2.76
RPL39P62891 U8.16-201ENST00000391279 133 ntBASIC-2.2□□□□□ -2.76
RPL39P62891 MTCO1P17-201ENST00000411522 491 ntBASIC-2.2□□□□□ -2.76
RPL39P62891 AC106883.1-201ENST00000418805 562 ntBASIC-2.2□□□□□ -2.76
RPL39P62891 AL117336.2-201ENST00000602435 335 ntBASIC-2.2□□□□□ -2.76
RPL39P62891 AC105081.1-201ENST00000617727 106 ntBASIC-2.2□□□□□ -2.76
RPL39P62891 Y_RNA.132-201ENST00000363421 102 ntBASIC-2.21□□□□□ -2.76
RPL39P62891 RNU6-1097P-201ENST00000363586 107 ntBASIC-2.21□□□□□ -2.76
RPL39P62891 RNU6-1199P-201ENST00000411249 104 ntBASIC-2.21□□□□□ -2.76
RPL39P62891 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-2.21□□□□□ -2.76
RPL39P62891 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-2.21□□□□□ -2.76
RPL39P62891 AC104629.1-201ENST00000494226 508 ntBASIC-2.21□□□□□ -2.76
RPL39P62891 MTCO3P15-201ENST00000526563 574 ntBASIC-2.21□□□□□ -2.76
RPL39P62891 MRPS18CP4-201ENST00000535821 231 ntBASIC-2.21□□□□□ -2.76
RPL39P62891 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-2.21□□□□□ -2.76
RPL39P62891 MTCYBP33-201ENST00000575007 1130 ntBASIC-2.21□□□□□ -2.76
RPL39P62891 AC012507.3-201ENST00000603556 477 ntBASIC-2.21□□□□□ -2.76
RPL39P62891 AC112487.2-201ENST00000637950 304 ntBASIC-2.21□□□□□ -2.76
RPL39P62891 MTND4P21-201ENST00000453886 1357 ntBASIC-2.22□□□□□ -2.76
RPL39P62891 RNU6-1305P-201ENST00000364353 104 ntBASIC-2.22□□□□□ -2.76
RPL39P62891 SNORA67.2-201ENST00000384300 149 ntBASIC-2.22□□□□□ -2.76
RPL39P62891 RNU6-364P-201ENST00000384387 107 ntBASIC-2.22□□□□□ -2.76
RPL39P62891 ART2BP-201ENST00000453501 499 ntBASIC-2.22□□□□□ -2.76
RPL39P62891 RNU2-34P-201ENST00000516534 121 ntBASIC-2.22□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms