Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.01□□□□□ -2.41
LSM6P62312 MTCO3P23-201ENST00000561363 289 ntBASIC-0.01□□□□□ -2.41
LSM6P62312 MIR3192-201ENST00000584920 77 ntBASIC-0.01□□□□□ -2.41
LSM6P62312 AC010620.1-201ENST00000601088 1102 ntBASIC-0.01□□□□□ -2.41
LSM6P62312 7SK.7-201ENST00000603504 247 ntBASIC-0.01□□□□□ -2.41
LSM6P62312 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.01□□□□□ -2.41
LSM6P62312 MIR6718-201ENST00000616153 80 ntBASIC-0.01□□□□□ -2.41
LSM6P62312 AC137590.2-201ENST00000619709 240 ntBASIC-0.01□□□□□ -2.41
LSM6P62312 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.01□□□□□ -2.41
LSM6P62312 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
LSM6P62312 MTND4P9-201ENST00000507819 1346 ntBASIC-0.02□□□□□ -2.41
LSM6P62312 RNU4-67P-201ENST00000364569 141 ntBASIC-0.02□□□□□ -2.41
LSM6P62312 MIR32-201ENST00000384965 70 ntBASIC-0.02□□□□□ -2.41
LSM6P62312 RNA5SP482-201ENST00000391269 118 ntBASIC-0.02□□□□□ -2.41
LSM6P62312 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.02□□□□□ -2.41
LSM6P62312 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.02□□□□□ -2.41
LSM6P62312 GMFBP1-201ENST00000467831 427 ntBASIC-0.02□□□□□ -2.41
LSM6P62312 AP000870.1-201ENST00000472927 406 ntBASIC-0.02□□□□□ -2.41
LSM6P62312 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.02□□□□□ -2.41
LSM6P62312 HSPE1P23-201ENST00000509838 286 ntBASIC-0.02□□□□□ -2.41
LSM6P62312 AC074133.1-201ENST00000515696 183 ntBASIC-0.02□□□□□ -2.41
LSM6P62312 AC090572.1-201ENST00000519251 160 ntBASIC-0.02□□□□□ -2.41
LSM6P62312 RNU6-323P-201ENST00000521915 107 ntBASIC-0.02□□□□□ -2.41
LSM6P62312 AF235103.2-201ENST00000525753 346 ntBASIC-0.02□□□□□ -2.41
LSM6P62312 MIR4431-201ENST00000579990 94 ntBASIC-0.02□□□□□ -2.41
LSM6P62312 MIR4775-201ENST00000581168 75 ntBASIC-0.02□□□□□ -2.41
LSM6P62312 MIR4514-201ENST00000581410 57 ntBASIC-0.02□□□□□ -2.41
LSM6P62312 AP000811.1-201ENST00000603803 651 ntBASIC-0.02□□□□□ -2.41
LSM6P62312 SNORD11B-201ENST00000607707 90 ntBASIC-0.02□□□□□ -2.41
LSM6P62312 MTND4P4-201ENST00000439033 1366 ntBASIC-0.03□□□□□ -2.41
LSM6P62312 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.03□□□□□ -2.41
LSM6P62312 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.03□□□□□ -2.41
LSM6P62312 RNY1P8-201ENST00000383970 114 ntBASIC-0.03□□□□□ -2.41
LSM6P62312 AL365184.2-201ENST00000431139 435 ntBASIC-0.03□□□□□ -2.41
LSM6P62312 AC010469.2-201ENST00000496412 480 ntBASIC-0.03□□□□□ -2.41
LSM6P62312 Vault.3-201ENST00000516676 95 ntBASIC-0.03□□□□□ -2.41
LSM6P62312 RNU6-612P-201ENST00000516909 102 ntBASIC-0.03□□□□□ -2.41
LSM6P62312 RNU6-1220P-201ENST00000517126 108 ntBASIC-0.03□□□□□ -2.41
LSM6P62312 RNA5SP454-201ENST00000517231 127 ntBASIC-0.03□□□□□ -2.41
LSM6P62312 AP003072.2-201ENST00000527756 676 ntBASIC-0.03□□□□□ -2.41
LSM6P62312 AC022878.1-201ENST00000530684 149 ntBASIC-0.03□□□□□ -2.41
LSM6P62312 RN7SL793P-201ENST00000583259 296 ntBASIC-0.03□□□□□ -2.41
LSM6P62312 BNIP3P39-201ENST00000601077 554 ntBASIC-0.03□□□□□ -2.41
LSM6P62312 AL117336.2-201ENST00000602435 335 ntBASIC-0.03□□□□□ -2.41
LSM6P62312 RNU6-94P-201ENST00000607728 107 ntBASIC-0.03□□□□□ -2.41
LSM6P62312 AL133173.2-201ENST00000614270 90 ntBASIC-0.03□□□□□ -2.41
LSM6P62312 MIR4315-1-201ENST00000636800 73 ntBASIC-0.03□□□□□ -2.41
LSM6P62312 MIR4315-2-201ENST00000640925 73 ntBASIC-0.03□□□□□ -2.41
LSM6P62312 RNA5SP62-201ENST00000363457 110 ntBASIC-0.04□□□□□ -2.42
LSM6P62312 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
LSM6P62312 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.04□□□□□ -2.42
LSM6P62312 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.04□□□□□ -2.42
LSM6P62312 CYCTP-201ENST00000504253 315 ntBASIC-0.04□□□□□ -2.42
LSM6P62312 MTND2P31-201ENST00000512602 616 ntBASIC-0.04□□□□□ -2.42
LSM6P62312 SNORA62.5-201ENST00000516634 120 ntBASIC-0.04□□□□□ -2.42
LSM6P62312 RNU11-2P-201ENST00000516898 142 ntBASIC-0.04□□□□□ -2.42
LSM6P62312 RNU1-117P-201ENST00000517041 158 ntBASIC-0.04□□□□□ -2.42
LSM6P62312 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.04□□□□□ -2.42
LSM6P62312 AP003327.1-201ENST00000529684 127 ntBASIC-0.04□□□□□ -2.42
LSM6P62312 RAC1P9-201ENST00000604990 392 ntBASIC-0.04□□□□□ -2.42
LSM6P62312 LARP7P1-201ENST00000605576 316 ntBASIC-0.04□□□□□ -2.42
LSM6P62312 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.04□□□□□ -2.42
LSM6P62312 AC006435.5-201ENST00000624486 112 ntBASIC-0.04□□□□□ -2.42
LSM6P62312 AC006927.3-201ENST00000638789 384 ntBASIC-0.04□□□□□ -2.42
LSM6P62312 MIR1-1-201ENST00000362147 71 ntBASIC-0.05□□□□□ -2.42
LSM6P62312 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.05□□□□□ -2.42
LSM6P62312 RNU6-83P-201ENST00000384568 112 ntBASIC-0.05□□□□□ -2.42
LSM6P62312 USP9YP12-201ENST00000450481 570 ntBASIC-0.05□□□□□ -2.42
LSM6P62312 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.05□□□□□ -2.42
LSM6P62312 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.05□□□□□ -2.42
LSM6P62312 AC036111.3-201ENST00000526389 112 ntBASIC-0.05□□□□□ -2.42
LSM6P62312 AC022523.2-201ENST00000561045 150 ntBASIC-0.05□□□□□ -2.42
LSM6P62312 EIF1P4-201ENST00000572664 335 ntBASIC-0.05□□□□□ -2.42
LSM6P62312 MIR4667-201ENST00000578933 66 ntBASIC-0.05□□□□□ -2.42
LSM6P62312 MIR4300-201ENST00000581016 96 ntBASIC-0.05□□□□□ -2.42
LSM6P62312 MIR4438-201ENST00000585271 93 ntBASIC-0.05□□□□□ -2.42
LSM6P62312 RNU6-85P-201ENST00000605989 107 ntBASIC-0.05□□□□□ -2.42
LSM6P62312 AC015726.2-201ENST00000620112 122 ntBASIC-0.05□□□□□ -2.42
LSM6P62312 AC092634.7-201ENST00000621022 103 ntBASIC-0.05□□□□□ -2.42
LSM6P62312 SCARNA4-201ENST00000629045 128 ntBASIC-0.05□□□□□ -2.42
LSM6P62312 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.06□□□□□ -2.42
LSM6P62312 SNORD113.3-201ENST00000364630 78 ntBASIC-0.06□□□□□ -2.42
LSM6P62312 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.06□□□□□ -2.42
LSM6P62312 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.06□□□□□ -2.42
LSM6P62312 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.06□□□□□ -2.42
LSM6P62312 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.06□□□□□ -2.42
LSM6P62312 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.06□□□□□ -2.42
LSM6P62312 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.06□□□□□ -2.42
LSM6P62312 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.06□□□□□ -2.42
LSM6P62312 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.06□□□□□ -2.42
LSM6P62312 MIR1185-2-201ENST00000408687 86 ntBASIC-0.06□□□□□ -2.42
LSM6P62312 GPR143P-201ENST00000434155 205 ntBASIC-0.06□□□□□ -2.42
LSM6P62312 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.06□□□□□ -2.42
LSM6P62312 SNRPGP12-201ENST00000449481 213 ntBASIC-0.06□□□□□ -2.42
LSM6P62312 MTATP6P9-201ENST00000515039 680 ntBASIC-0.06□□□□□ -2.42
LSM6P62312 SNORD27.1-201ENST00000516319 72 ntBASIC-0.06□□□□□ -2.42
LSM6P62312 RNU6-58P-201ENST00000517143 103 ntBASIC-0.06□□□□□ -2.42
LSM6P62312 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.06□□□□□ -2.42
LSM6P62312 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.06□□□□□ -2.42
LSM6P62312 AC122133.1-201ENST00000613964 233 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms