Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
SEC61A1P61619 RNU6-245P-201ENST00000384020 107 ntBASIC2.25□□□□□ -2.05
SEC61A1P61619 Y_RNA.498-201ENST00000384460 102 ntBASIC2.25□□□□□ -2.05
SEC61A1P61619 Y_RNA.518-201ENST00000384552 113 ntBASIC2.25□□□□□ -2.05
SEC61A1P61619 RNU6-21P-201ENST00000384710 107 ntBASIC2.25□□□□□ -2.05
SEC61A1P61619 Y_RNA.570-201ENST00000384750 101 ntBASIC2.25□□□□□ -2.05
SEC61A1P61619 MIR196B-201ENST00000384852 84 ntBASIC2.25□□□□□ -2.05
SEC61A1P61619 AL603910.2-201ENST00000407268 136 ntBASIC2.25□□□□□ -2.05
SEC61A1P61619 Y_RNA.597-201ENST00000410463 100 ntBASIC2.25□□□□□ -2.05
SEC61A1P61619 ELOCP21-201ENST00000412558 336 ntBASIC2.25□□□□□ -2.05
SEC61A1P61619 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.25□□□□□ -2.05
SEC61A1P61619 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.25□□□□□ -2.05
SEC61A1P61619 AC104389.3-201ENST00000445629 235 ntBASIC2.25□□□□□ -2.05
SEC61A1P61619 RNU6-1023P-201ENST00000516137 106 ntBASIC2.25□□□□□ -2.05
SEC61A1P61619 RNU2-44P-201ENST00000516795 194 ntBASIC2.25□□□□□ -2.05
SEC61A1P61619 RNU6-111P-201ENST00000517179 105 ntBASIC2.25□□□□□ -2.05
SEC61A1P61619 AP002001.1-203ENST00000534002 267 ntBASIC2.25□□□□□ -2.05
SEC61A1P61619 AC027176.1-201ENST00000560204 514 ntBASIC2.25□□□□□ -2.05
SEC61A1P61619 MIR4635-201ENST00000583759 79 ntBASIC2.25□□□□□ -2.05
SEC61A1P61619 AC005176.2-201ENST00000596933 147 ntBASIC2.25□□□□□ -2.05
SEC61A1P61619 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.25□□□□□ -2.05
SEC61A1P61619 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SEC61A1P61619 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SEC61A1P61619 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
SEC61A1P61619 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.24□□□□□ -2.05
SEC61A1P61619 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
SEC61A1P61619 Y_RNA.101-201ENST00000363154 102 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 RNU1-23P-201ENST00000363361 144 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 Y_RNA.257-201ENST00000364596 102 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 Y_RNA.277-201ENST00000364754 102 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 SNORA72.2-201ENST00000365028 127 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 RNU6-290P-201ENST00000365212 101 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 Y_RNA.331-201ENST00000365267 102 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 Y_RNA.462-201ENST00000384268 102 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 SNORA80E-201ENST00000384744 137 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
SEC61A1P61619 RNA5SP210-201ENST00000391034 120 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 MIR320B2-201ENST00000408479 138 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 RNU5A-5P-201ENST00000411054 116 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 RAB28P5-201ENST00000427490 651 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 AC007395.1-201ENST00000451333 677 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 AL139109.1-201ENST00000455491 297 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 SEPT14P8-201ENST00000508026 178 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.24□□□□□ -2.05
SEC61A1P61619 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 AK6P2-201ENST00000549020 471 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 MIR4446-201ENST00000578505 67 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 MIR4423-201ENST00000580922 80 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 MIR3162-201ENST00000581818 82 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 TCL6_2.1-201ENST00000615162 119 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 AC004467.1-201ENST00000615678 330 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 AC006001.4-201ENST00000622243 395 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 IGHVIII-44-202ENST00000636235 289 ntBASIC2.24□□□□□ -2.05
SEC61A1P61619 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.24□□□□□ -2.05
SEC61A1P61619 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.24□□□□□ -2.05
SEC61A1P61619 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
SEC61A1P61619 MIR449A-201ENST00000362113 91 ntBASIC2.23□□□□□ -2.05
SEC61A1P61619 RNU4-90P-201ENST00000362773 141 ntBASIC2.23□□□□□ -2.05
SEC61A1P61619 Y_RNA.65-201ENST00000362846 100 ntBASIC2.23□□□□□ -2.05
SEC61A1P61619 SNORD81.1-201ENST00000363064 77 ntBASIC2.23□□□□□ -2.05
SEC61A1P61619 RNU6-338P-201ENST00000383888 105 ntBASIC2.23□□□□□ -2.05
SEC61A1P61619 Y_RNA.416-201ENST00000384014 113 ntBASIC2.23□□□□□ -2.05
SEC61A1P61619 Y_RNA.539-201ENST00000384635 107 ntBASIC2.23□□□□□ -2.05
SEC61A1P61619 MIR9-1-201ENST00000385198 89 ntBASIC2.23□□□□□ -2.05
SEC61A1P61619 RNA5SP504-201ENST00000410676 117 ntBASIC2.23□□□□□ -2.05
SEC61A1P61619 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.23□□□□□ -2.05
SEC61A1P61619 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.23□□□□□ -2.05
SEC61A1P61619 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.23□□□□□ -2.05
SEC61A1P61619 MRPS10P1-201ENST00000448483 130 ntBASIC2.23□□□□□ -2.05
SEC61A1P61619 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.23□□□□□ -2.05
SEC61A1P61619 AC080013.2-201ENST00000460866 323 ntBASIC2.23□□□□□ -2.05
SEC61A1P61619 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.23□□□□□ -2.05
SEC61A1P61619 AC233702.2-202ENST00000562547 291 ntBASIC2.23□□□□□ -2.05
SEC61A1P61619 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.23□□□□□ -2.05
SEC61A1P61619 AC008749.1-201ENST00000597650 306 ntBASIC2.23□□□□□ -2.05
SEC61A1P61619 SNORD113-5-201ENST00000607261 78 ntBASIC2.23□□□□□ -2.05
SEC61A1P61619 AC091932.3-201ENST00000624223 323 ntBASIC2.23□□□□□ -2.05
SEC61A1P61619 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SEC61A1P61619 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SEC61A1P61619 RNU1-62P-201ENST00000362599 164 ntBASIC2.22□□□□□ -2.05
SEC61A1P61619 RNA5SP393-201ENST00000363423 117 ntBASIC2.22□□□□□ -2.05
SEC61A1P61619 RNU5F-3P-201ENST00000363767 117 ntBASIC2.22□□□□□ -2.05
SEC61A1P61619 Y_RNA.446-201ENST00000384178 104 ntBASIC2.22□□□□□ -2.05
SEC61A1P61619 RNU6-1026P-201ENST00000384465 108 ntBASIC2.22□□□□□ -2.05
SEC61A1P61619 Y_RNA.552-201ENST00000384665 112 ntBASIC2.22□□□□□ -2.05
SEC61A1P61619 RNU6-1072P-201ENST00000384703 107 ntBASIC2.22□□□□□ -2.05
SEC61A1P61619 RNU6-443P-201ENST00000384780 107 ntBASIC2.22□□□□□ -2.05
SEC61A1P61619 SNORA11.2-201ENST00000408318 127 ntBASIC2.22□□□□□ -2.05
SEC61A1P61619 RNU6-847P-201ENST00000411115 108 ntBASIC2.22□□□□□ -2.05
SEC61A1P61619 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.22□□□□□ -2.05
SEC61A1P61619 AC139712.2-201ENST00000424302 339 ntBASIC2.22□□□□□ -2.05
SEC61A1P61619 RNU7-26P-201ENST00000458980 63 ntBASIC2.22□□□□□ -2.05
SEC61A1P61619 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.22□□□□□ -2.05
SEC61A1P61619 SERF1AP1-201ENST00000514575 187 ntBASIC2.22□□□□□ -2.05
SEC61A1P61619 MIR4643-201ENST00000577473 78 ntBASIC2.22□□□□□ -2.05
SEC61A1P61619 MIR3145-201ENST00000580727 82 ntBASIC2.22□□□□□ -2.05
SEC61A1P61619 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.22□□□□□ -2.05
SEC61A1P61619 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.22□□□□□ -2.05
SEC61A1P61619 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms