Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 RNA5SP454-201ENST00000517231 127 ntBASIC0.29□□□□□ -2.36
CXCR4P61073 AC022868.1-201ENST00000517767 391 ntBASIC0.29□□□□□ -2.36
CXCR4P61073 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.29□□□□□ -2.36
CXCR4P61073 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.29□□□□□ -2.36
CXCR4P61073 AC234772.3-201ENST00000602277 528 ntBASIC0.29□□□□□ -2.36
CXCR4P61073 AC245014.2-201ENST00000603689 287 ntBASIC0.29□□□□□ -2.36
CXCR4P61073 AC246785.4-201ENST00000605374 287 ntBASIC0.29□□□□□ -2.36
CXCR4P61073 AP001506.1-201ENST00000615444 211 ntBASIC0.29□□□□□ -2.36
CXCR4P61073 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.29□□□□□ -2.36
CXCR4P61073 AP000720.1-201ENST00000625091 483 ntBASIC0.29□□□□□ -2.36
CXCR4P61073 AC134026.1-201ENST00000623249 2239 ntBASIC0.29□□□□□ -2.36
CXCR4P61073 AC106754.1-201ENST00000562632 1513 ntBASIC0.28□□□□□ -2.36
CXCR4P61073 Y_RNA.123-201ENST00000363338 102 ntBASIC0.28□□□□□ -2.36
CXCR4P61073 MIR1185-2-201ENST00000408687 86 ntBASIC0.28□□□□□ -2.36
CXCR4P61073 RNA5SP504-201ENST00000410676 117 ntBASIC0.28□□□□□ -2.36
CXCR4P61073 RPL23AP50-201ENST00000434149 455 ntBASIC0.28□□□□□ -2.36
CXCR4P61073 RNU6-1110P-201ENST00000516462 101 ntBASIC0.28□□□□□ -2.36
CXCR4P61073 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
CXCR4P61073 RNU7-28P-201ENST00000516759 62 ntBASIC0.28□□□□□ -2.36
CXCR4P61073 RNU6-430P-201ENST00000517078 107 ntBASIC0.28□□□□□ -2.36
CXCR4P61073 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
CXCR4P61073 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
CXCR4P61073 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.28□□□□□ -2.36
CXCR4P61073 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
CXCR4P61073 MIR6734-201ENST00000621166 68 ntBASIC0.28□□□□□ -2.36
CXCR4P61073 7SK.10-201ENST00000621414 298 ntBASIC0.28□□□□□ -2.36
CXCR4P61073 AC243829.3-201ENST00000622177 108 ntBASIC0.28□□□□□ -2.36
CXCR4P61073 Y_RNA.330-201ENST00000365230 109 ntBASIC0.27□□□□□ -2.37
CXCR4P61073 SNORA50A-201ENST00000384225 134 ntBASIC0.27□□□□□ -2.37
CXCR4P61073 RNU1-119P-201ENST00000391122 165 ntBASIC0.27□□□□□ -2.37
CXCR4P61073 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.27□□□□□ -2.37
CXCR4P61073 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.27□□□□□ -2.37
CXCR4P61073 AL593851.1-201ENST00000426171 157 ntBASIC0.27□□□□□ -2.37
CXCR4P61073 AL162725.1-201ENST00000435405 301 ntBASIC0.27□□□□□ -2.37
CXCR4P61073 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.27□□□□□ -2.37
CXCR4P61073 AC104332.1-201ENST00000440471 797 ntBASIC0.27□□□□□ -2.37
CXCR4P61073 NDUFB4P10-201ENST00000452541 359 ntBASIC0.27□□□□□ -2.37
CXCR4P61073 AL033528.1-201ENST00000453780 140 ntBASIC0.27□□□□□ -2.37
CXCR4P61073 AF186996.7-201ENST00000492781 209 ntBASIC0.27□□□□□ -2.37
CXCR4P61073 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.27□□□□□ -2.37
CXCR4P61073 FRG2DP-202ENST00000566967 323 ntBASIC0.27□□□□□ -2.37
CXCR4P61073 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.27□□□□□ -2.37
CXCR4P61073 AC131055.1-201ENST00000584626 316 ntBASIC0.27□□□□□ -2.37
CXCR4P61073 AC004223.2-201ENST00000590309 544 ntBASIC0.27□□□□□ -2.37
CXCR4P61073 AC004223.4-201ENST00000612426 332 ntBASIC0.27□□□□□ -2.37
CXCR4P61073 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.27□□□□□ -2.37
CXCR4P61073 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.27□□□□□ -2.37
CXCR4P61073 AL442644.1-201ENST00000454390 3105 ntBASIC0.26□□□□□ -2.37
CXCR4P61073 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
CXCR4P61073 RNA5SP264-201ENST00000363115 107 ntBASIC0.26□□□□□ -2.37
CXCR4P61073 RNU6-1214P-201ENST00000363650 109 ntBASIC0.26□□□□□ -2.37
CXCR4P61073 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
CXCR4P61073 RNU6-245P-201ENST00000384020 107 ntBASIC0.26□□□□□ -2.37
CXCR4P61073 RNU6-1067P-201ENST00000384752 107 ntBASIC0.26□□□□□ -2.37
CXCR4P61073 RNU6-903P-201ENST00000391270 109 ntBASIC0.26□□□□□ -2.37
CXCR4P61073 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.26□□□□□ -2.37
CXCR4P61073 MTCO2P12-201ENST00000427426 682 ntBASIC0.26□□□□□ -2.37
CXCR4P61073 AC093019.1-201ENST00000443135 252 ntBASIC0.26□□□□□ -2.37
CXCR4P61073 SNRPGP9-201ENST00000456025 225 ntBASIC0.26□□□□□ -2.37
CXCR4P61073 snoU13.25-201ENST00000458945 104 ntBASIC0.26□□□□□ -2.37
CXCR4P61073 OR9P1P-201ENST00000496431 281 ntBASIC0.26□□□□□ -2.37
CXCR4P61073 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.26□□□□□ -2.37
CXCR4P61073 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.26□□□□□ -2.37
CXCR4P61073 SNORD111.1-201ENST00000516421 86 ntBASIC0.26□□□□□ -2.37
CXCR4P61073 RNA5SP54-201ENST00000516951 92 ntBASIC0.26□□□□□ -2.37
CXCR4P61073 MTND1P5-201ENST00000517906 940 ntBASIC0.26□□□□□ -2.37
CXCR4P61073 AP002963.1-201ENST00000530590 184 ntBASIC0.26□□□□□ -2.37
CXCR4P61073 AC109810.1-201ENST00000534066 224 ntBASIC0.26□□□□□ -2.37
CXCR4P61073 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.26□□□□□ -2.37
CXCR4P61073 AL136317.1-201ENST00000612653 226 ntBASIC0.26□□□□□ -2.37
CXCR4P61073 AC093913.1-201ENST00000614178 329 ntBASIC0.26□□□□□ -2.37
CXCR4P61073 MIR6513-201ENST00000621188 64 ntBASIC0.26□□□□□ -2.37
CXCR4P61073 AC009161.2-201ENST00000624626 138 ntBASIC0.26□□□□□ -2.37
CXCR4P61073 OR5AK4P-201ENST00000635912 903 ntBASIC0.26□□□□□ -2.37
CXCR4P61073 RNU6-1317P-201ENST00000364582 104 ntBASIC0.25□□□□□ -2.37
CXCR4P61073 SNORA40.3-201ENST00000390964 122 ntBASIC0.25□□□□□ -2.37
CXCR4P61073 AL663109.1-201ENST00000411498 844 ntBASIC0.25□□□□□ -2.37
CXCR4P61073 MTCO1P19-201ENST00000443487 500 ntBASIC0.25□□□□□ -2.37
CXCR4P61073 AC002350.1-201ENST00000490759 375 ntBASIC0.25□□□□□ -2.37
CXCR4P61073 MTND1P35-201ENST00000526739 508 ntBASIC0.25□□□□□ -2.37
CXCR4P61073 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.25□□□□□ -2.37
CXCR4P61073 AC023827.1-201ENST00000569247 97 ntBASIC0.25□□□□□ -2.37
CXCR4P61073 MIR4438-201ENST00000585271 93 ntBASIC0.25□□□□□ -2.37
CXCR4P61073 AC092354.1-201ENST00000606057 376 ntBASIC0.25□□□□□ -2.37
CXCR4P61073 AC087683.2-201ENST00000611384 326 ntBASIC0.25□□□□□ -2.37
CXCR4P61073 SEPT14P17-201ENST00000617978 177 ntBASIC0.25□□□□□ -2.37
CXCR4P61073 MIR6079-201ENST00000635807 62 ntBASIC0.25□□□□□ -2.37
CXCR4P61073 RNU1-133P-201ENST00000364867 167 ntBASIC0.24□□□□□ -2.37
CXCR4P61073 AC244098.3-201ENST00000424803 96 ntBASIC0.24□□□□□ -2.37
CXCR4P61073 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.24□□□□□ -2.37
CXCR4P61073 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.24□□□□□ -2.37
CXCR4P61073 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.24□□□□□ -2.37
CXCR4P61073 USP9YP29-201ENST00000445112 563 ntBASIC0.24□□□□□ -2.37
CXCR4P61073 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.24□□□□□ -2.37
CXCR4P61073 AC091133.4-201ENST00000511142 308 ntBASIC0.24□□□□□ -2.37
CXCR4P61073 MTATP6P9-201ENST00000515039 680 ntBASIC0.24□□□□□ -2.37
CXCR4P61073 RNU6-58P-201ENST00000517143 103 ntBASIC0.24□□□□□ -2.37
CXCR4P61073 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.24□□□□□ -2.37
CXCR4P61073 SCOCP1-201ENST00000554676 349 ntBASIC0.24□□□□□ -2.37
CXCR4P61073 AC011195.1-201ENST00000578177 177 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 201.2 ms