Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AL359821.1-201ENST00000605519 182 ntBASIC1.45□□□□□ -2.18
SRP54P61011 MIR8063-201ENST00000621930 81 ntBASIC1.45□□□□□ -2.18
SRP54P61011 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.45□□□□□ -2.18
SRP54P61011 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SRP54P61011 Y_RNA.3-201ENST00000362331 103 ntBASIC1.44□□□□□ -2.18
SRP54P61011 SNORA33-201ENST00000363664 130 ntBASIC1.44□□□□□ -2.18
SRP54P61011 RNU6-280P-201ENST00000364145 104 ntBASIC1.44□□□□□ -2.18
SRP54P61011 Y_RNA.287-201ENST00000364853 94 ntBASIC1.44□□□□□ -2.18
SRP54P61011 RNU6-1240P-201ENST00000365155 104 ntBASIC1.44□□□□□ -2.18
SRP54P61011 RNU6-1013P-201ENST00000384180 107 ntBASIC1.44□□□□□ -2.18
SRP54P61011 RNU6-17P-201ENST00000384245 107 ntBASIC1.44□□□□□ -2.18
SRP54P61011 RNU6-18P-201ENST00000384527 107 ntBASIC1.44□□□□□ -2.18
SRP54P61011 RNU6-417P-201ENST00000384712 107 ntBASIC1.44□□□□□ -2.18
SRP54P61011 COX6CP10-201ENST00000416832 224 ntBASIC1.44□□□□□ -2.18
SRP54P61011 MTATP6P13-201ENST00000438531 667 ntBASIC1.44□□□□□ -2.18
SRP54P61011 AC092473.1-201ENST00000441098 221 ntBASIC1.44□□□□□ -2.18
SRP54P61011 AC073910.1-201ENST00000445047 438 ntBASIC1.44□□□□□ -2.18
SRP54P61011 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.44□□□□□ -2.18
SRP54P61011 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.44□□□□□ -2.18
SRP54P61011 Y_RNA.675-201ENST00000516389 149 ntBASIC1.44□□□□□ -2.18
SRP54P61011 Y_RNA.676-201ENST00000516393 96 ntBASIC1.44□□□□□ -2.18
SRP54P61011 SNORA25.14-201ENST00000516481 132 ntBASIC1.44□□□□□ -2.18
SRP54P61011 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.44□□□□□ -2.18
SRP54P61011 U3.8-201ENST00000363675 217 ntBASIC1.43□□□□□ -2.18
SRP54P61011 SNORA7.1-201ENST00000363750 139 ntBASIC1.43□□□□□ -2.18
SRP54P61011 RNU6-873P-201ENST00000363833 107 ntBASIC1.43□□□□□ -2.18
SRP54P61011 SNORD1A-201ENST00000364968 72 ntBASIC1.43□□□□□ -2.18
SRP54P61011 RNU4-12P-201ENST00000365233 139 ntBASIC1.43□□□□□ -2.18
SRP54P61011 RNU6-541P-201ENST00000384709 110 ntBASIC1.43□□□□□ -2.18
SRP54P61011 MIR150-201ENST00000385048 84 ntBASIC1.43□□□□□ -2.18
SRP54P61011 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.43□□□□□ -2.18
SRP54P61011 RNU6-159P-201ENST00000391080 106 ntBASIC1.43□□□□□ -2.18
SRP54P61011 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.43□□□□□ -2.18
SRP54P61011 RNU6-321P-201ENST00000410912 106 ntBASIC1.43□□□□□ -2.18
SRP54P61011 AC243428.1-201ENST00000421099 264 ntBASIC1.43□□□□□ -2.18
SRP54P61011 SDAD1P3-201ENST00000427380 333 ntBASIC1.43□□□□□ -2.18
SRP54P61011 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.43□□□□□ -2.18
SRP54P61011 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.43□□□□□ -2.18
SRP54P61011 RPL30P10-201ENST00000488148 337 ntBASIC1.43□□□□□ -2.18
SRP54P61011 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.43□□□□□ -2.18
SRP54P61011 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.43□□□□□ -2.18
SRP54P61011 MIR4709-201ENST00000577272 72 ntBASIC1.43□□□□□ -2.18
SRP54P61011 AC015688.6-201ENST00000577737 104 ntBASIC1.43□□□□□ -2.18
SRP54P61011 MIR4421-201ENST00000578133 69 ntBASIC1.43□□□□□ -2.18
SRP54P61011 AP001485.1-201ENST00000604799 199 ntBASIC1.43□□□□□ -2.18
SRP54P61011 AC095038.3-201ENST00000634439 195 ntBASIC1.43□□□□□ -2.18
SRP54P61011 MTND4P12-201ENST00000498999 1377 ntBASIC1.43□□□□□ -2.18
SRP54P61011 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
SRP54P61011 Y_RNA.295-201ENST00000364918 102 ntBASIC1.42□□□□□ -2.18
SRP54P61011 Y_RNA.318-201ENST00000365131 97 ntBASIC1.42□□□□□ -2.18
SRP54P61011 Y_RNA.490-201ENST00000384413 102 ntBASIC1.42□□□□□ -2.18
SRP54P61011 RNU6-950P-201ENST00000384651 107 ntBASIC1.42□□□□□ -2.18
SRP54P61011 SNORD116-4-201ENST00000384733 96 ntBASIC1.42□□□□□ -2.18
SRP54P61011 MIR194-1-201ENST00000384892 85 ntBASIC1.42□□□□□ -2.18
SRP54P61011 AC004965.1-201ENST00000413033 213 ntBASIC1.42□□□□□ -2.18
SRP54P61011 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.42□□□□□ -2.18
SRP54P61011 MTND4LP16-201ENST00000440828 295 ntBASIC1.42□□□□□ -2.18
SRP54P61011 AC027119.1-201ENST00000440877 241 ntBASIC1.42□□□□□ -2.18
SRP54P61011 AC005840.1-201ENST00000498412 377 ntBASIC1.42□□□□□ -2.18
SRP54P61011 AC079140.2-201ENST00000506193 142 ntBASIC1.42□□□□□ -2.18
SRP54P61011 TRMT112P2-201ENST00000512910 132 ntBASIC1.42□□□□□ -2.18
SRP54P61011 AC134698.4-201ENST00000523451 826 ntBASIC1.42□□□□□ -2.18
SRP54P61011 MIR4781-201ENST00000585250 76 ntBASIC1.42□□□□□ -2.18
SRP54P61011 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.42□□□□□ -2.18
SRP54P61011 MIR7974-201ENST00000615835 79 ntBASIC1.42□□□□□ -2.18
SRP54P61011 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SRP54P61011 MTND5P35-201ENST00000557537 1720 ntBASIC1.41□□□□□ -2.18
SRP54P61011 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.41□□□□□ -2.18
SRP54P61011 MTND5P10-201ENST00000603719 1809 ntBASIC1.41□□□□□ -2.18
SRP54P61011 AL391987.6-201ENST00000305671 199 ntBASIC1.41□□□□□ -2.18
SRP54P61011 RNU6-203P-201ENST00000384038 104 ntBASIC1.41□□□□□ -2.18
SRP54P61011 RNU6-793P-201ENST00000384233 104 ntBASIC1.41□□□□□ -2.18
SRP54P61011 RNU6-831P-201ENST00000384548 107 ntBASIC1.41□□□□□ -2.18
SRP54P61011 RNU6-306P-201ENST00000384617 107 ntBASIC1.41□□□□□ -2.18
SRP54P61011 RNA5SP323-201ENST00000391094 133 ntBASIC1.41□□□□□ -2.18
SRP54P61011 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.41□□□□□ -2.18
SRP54P61011 SNRPGP13-201ENST00000442212 177 ntBASIC1.41□□□□□ -2.18
SRP54P61011 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.41□□□□□ -2.18
SRP54P61011 RPS29P25-201ENST00000481709 171 ntBASIC1.41□□□□□ -2.18
SRP54P61011 HMGN1P12-201ENST00000499125 195 ntBASIC1.41□□□□□ -2.18
SRP54P61011 RNU7-175P-201ENST00000515915 61 ntBASIC1.41□□□□□ -2.18
SRP54P61011 AC093783.1-201ENST00000612976 329 ntBASIC1.41□□□□□ -2.18
SRP54P61011 AC009248.2-201ENST00000619826 254 ntBASIC1.41□□□□□ -2.18
SRP54P61011 AL121890.5-201ENST00000620848 304 ntBASIC1.41□□□□□ -2.18
SRP54P61011 AC100810.6-201ENST00000638068 285 ntBASIC1.41□□□□□ -2.18
SRP54P61011 ZNF299P-201ENST00000406845 1804 ntBASIC1.4□□□□□ -2.18
SRP54P61011 RNU4-40P-201ENST00000364351 143 ntBASIC1.4□□□□□ -2.19
SRP54P61011 SNORA4.2-201ENST00000365313 147 ntBASIC1.4□□□□□ -2.19
SRP54P61011 Y_RNA.516-201ENST00000384541 124 ntBASIC1.4□□□□□ -2.19
SRP54P61011 MIR1185-2-201ENST00000408687 86 ntBASIC1.4□□□□□ -2.19
SRP54P61011 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.4□□□□□ -2.19
SRP54P61011 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.4□□□□□ -2.19
SRP54P61011 MTND1P17-201ENST00000448961 204 ntBASIC1.4□□□□□ -2.19
SRP54P61011 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.4□□□□□ -2.19
SRP54P61011 RPS26P45-201ENST00000471748 340 ntBASIC1.4□□□□□ -2.19
SRP54P61011 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.4□□□□□ -2.19
SRP54P61011 RNA5SP454-201ENST00000517231 127 ntBASIC1.4□□□□□ -2.19
SRP54P61011 AC008269.2-201ENST00000561915 1105 ntBASIC1.4□□□□□ -2.19
SRP54P61011 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.4□□□□□ -2.19
SRP54P61011 MIR4273-201ENST00000582824 84 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms