Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 SNORD87-201ENST00000364849 89 ntBASIC1.03□□□□□ -2.24
VSX2P58304 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
VSX2P58304 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.03□□□□□ -2.24
VSX2P58304 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.03□□□□□ -2.24
VSX2P58304 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.03□□□□□ -2.24
VSX2P58304 Y_RNA.665-201ENST00000516177 98 ntBASIC1.03□□□□□ -2.24
VSX2P58304 MTND1P5-201ENST00000517906 940 ntBASIC1.03□□□□□ -2.24
VSX2P58304 SUMO2P16-201ENST00000519475 264 ntBASIC1.03□□□□□ -2.24
VSX2P58304 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.03□□□□□ -2.24
VSX2P58304 SNRPGP20-201ENST00000604477 205 ntBASIC1.03□□□□□ -2.24
VSX2P58304 AC004492.1-201ENST00000607036 742 ntBASIC1.03□□□□□ -2.24
VSX2P58304 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.03□□□□□ -2.24
VSX2P58304 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.03□□□□□ -2.24
VSX2P58304 Y_RNA.38-201ENST00000362617 102 ntBASIC1.02□□□□□ -2.25
VSX2P58304 SNORD114-27-201ENST00000363766 70 ntBASIC1.02□□□□□ -2.25
VSX2P58304 RNU6-534P-201ENST00000364877 106 ntBASIC1.02□□□□□ -2.25
VSX2P58304 RNU6-95P-201ENST00000384697 107 ntBASIC1.02□□□□□ -2.25
VSX2P58304 MIR32-201ENST00000384965 70 ntBASIC1.02□□□□□ -2.25
VSX2P58304 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
VSX2P58304 RNU6-908P-201ENST00000410160 94 ntBASIC1.02□□□□□ -2.25
VSX2P58304 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.02□□□□□ -2.25
VSX2P58304 COX6CP10-201ENST00000416832 224 ntBASIC1.02□□□□□ -2.25
VSX2P58304 EIF1P1-201ENST00000421436 341 ntBASIC1.02□□□□□ -2.25
VSX2P58304 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.02□□□□□ -2.25
VSX2P58304 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.02□□□□□ -2.25
VSX2P58304 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.02□□□□□ -2.25
VSX2P58304 MTND4P5-201ENST00000435821 1374 ntBASIC1.02□□□□□ -2.25
VSX2P58304 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.02□□□□□ -2.25
VSX2P58304 AC107401.1-201ENST00000503426 685 ntBASIC1.02□□□□□ -2.25
VSX2P58304 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.02□□□□□ -2.25
VSX2P58304 ZNF519P2-201ENST00000557032 169 ntBASIC1.02□□□□□ -2.25
VSX2P58304 FRG2DP-202ENST00000566967 323 ntBASIC1.02□□□□□ -2.25
VSX2P58304 MIR4709-201ENST00000577272 72 ntBASIC1.02□□□□□ -2.25
VSX2P58304 SNORA4-201ENST00000584302 138 ntBASIC1.02□□□□□ -2.25
VSX2P58304 MZT1P2-201ENST00000604387 248 ntBASIC1.02□□□□□ -2.25
VSX2P58304 AC022217.4-201ENST00000604389 163 ntBASIC1.02□□□□□ -2.25
VSX2P58304 MIR7111-201ENST00000619751 72 ntBASIC1.02□□□□□ -2.25
VSX2P58304 AC068137.3-201ENST00000639191 341 ntBASIC1.02□□□□□ -2.25
VSX2P58304 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
VSX2P58304 Y_RNA.41-201ENST00000362646 102 ntBASIC1.01□□□□□ -2.25
VSX2P58304 Y_RNA.118-201ENST00000363300 101 ntBASIC1.01□□□□□ -2.25
VSX2P58304 RNU1-93P-201ENST00000364704 169 ntBASIC1.01□□□□□ -2.25
VSX2P58304 RNU6-1042P-201ENST00000384204 107 ntBASIC1.01□□□□□ -2.25
VSX2P58304 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.01□□□□□ -2.25
VSX2P58304 AL353572.1-201ENST00000442490 417 ntBASIC1.01□□□□□ -2.25
VSX2P58304 RPL30P7-201ENST00000479312 323 ntBASIC1.01□□□□□ -2.25
VSX2P58304 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.01□□□□□ -2.25
VSX2P58304 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.01□□□□□ -2.25
VSX2P58304 RNU6-58P-201ENST00000517143 103 ntBASIC1.01□□□□□ -2.25
VSX2P58304 AL512310.8-201ENST00000550183 120 ntBASIC1.01□□□□□ -2.25
VSX2P58304 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.01□□□□□ -2.25
VSX2P58304 MIR3672-201ENST00000584290 82 ntBASIC1.01□□□□□ -2.25
VSX2P58304 SNORD114-21-201ENST00000606412 72 ntBASIC1.01□□□□□ -2.25
VSX2P58304 AC245008.1-201ENST00000608123 476 ntBASIC1.01□□□□□ -2.25
VSX2P58304 AC021506.2-201ENST00000612354 169 ntBASIC1.01□□□□□ -2.25
VSX2P58304 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.01□□□□□ -2.25
VSX2P58304 AL078596.1-201ENST00000624856 447 ntBASIC1.01□□□□□ -2.25
VSX2P58304 snoZ196.1-201ENST00000625269 89 ntBASIC1.01□□□□□ -2.25
VSX2P58304 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.01□□□□□ -2.25
VSX2P58304 AC099654.12-201ENST00000639868 649 ntBASIC1.01□□□□□ -2.25
VSX2P58304 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.01□□□□□ -2.25
VSX2P58304 SNORA25.8-201ENST00000364831 128 ntBASIC1□□□□□ -2.25
VSX2P58304 SNORA22-201ENST00000383907 134 ntBASIC1□□□□□ -2.25
VSX2P58304 RNU6-1080P-201ENST00000383982 107 ntBASIC1□□□□□ -2.25
VSX2P58304 RNU6-933P-201ENST00000384424 107 ntBASIC1□□□□□ -2.25
VSX2P58304 RNU6-790P-201ENST00000384479 105 ntBASIC1□□□□□ -2.25
VSX2P58304 SNORA22C-201ENST00000384614 134 ntBASIC1□□□□□ -2.25
VSX2P58304 MIR513A1-201ENST00000385138 129 ntBASIC1□□□□□ -2.25
VSX2P58304 SNORA12.1-201ENST00000390873 148 ntBASIC1□□□□□ -2.25
VSX2P58304 RNU6-332P-201ENST00000391193 108 ntBASIC1□□□□□ -2.25
VSX2P58304 MIR1253-201ENST00000408273 105 ntBASIC1□□□□□ -2.25
VSX2P58304 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1□□□□□ -2.25
VSX2P58304 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1□□□□□ -2.25
VSX2P58304 AC069257.2-201ENST00000441819 155 ntBASIC1□□□□□ -2.25
VSX2P58304 RNU7-34P-201ENST00000459394 64 ntBASIC1□□□□□ -2.25
VSX2P58304 RNU6-221P-201ENST00000459541 99 ntBASIC1□□□□□ -2.25
VSX2P58304 AC114982.1-201ENST00000469402 321 ntBASIC1□□□□□ -2.25
VSX2P58304 MTCO2P30-201ENST00000503662 364 ntBASIC1□□□□□ -2.25
VSX2P58304 RNU6-1281P-201ENST00000516223 105 ntBASIC1□□□□□ -2.25
VSX2P58304 RNU6-344P-201ENST00000516635 111 ntBASIC1□□□□□ -2.25
VSX2P58304 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1□□□□□ -2.25
VSX2P58304 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1□□□□□ -2.25
VSX2P58304 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1□□□□□ -2.25
VSX2P58304 AL138726.1-201ENST00000614873 333 ntBASIC1□□□□□ -2.25
VSX2P58304 DLEU2_5.1-201ENST00000615567 84 ntBASIC1□□□□□ -2.25
VSX2P58304 AC006504.8-201ENST00000621046 635 ntBASIC1□□□□□ -2.25
VSX2P58304 RNU6-727P-201ENST00000363592 107 ntBASIC0.99□□□□□ -2.25
VSX2P58304 Y_RNA.256-201ENST00000364594 104 ntBASIC0.99□□□□□ -2.25
VSX2P58304 RNU6-1240P-201ENST00000365155 104 ntBASIC0.99□□□□□ -2.25
VSX2P58304 RNA5SP259-201ENST00000365541 109 ntBASIC0.99□□□□□ -2.25
VSX2P58304 RNY1P14-201ENST00000384426 108 ntBASIC0.99□□□□□ -2.25
VSX2P58304 RPL37P10-201ENST00000412884 288 ntBASIC0.99□□□□□ -2.25
VSX2P58304 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.99□□□□□ -2.25
VSX2P58304 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.99□□□□□ -2.25
VSX2P58304 RPS29P28-201ENST00000446439 141 ntBASIC0.99□□□□□ -2.25
VSX2P58304 MTND1P29-201ENST00000448112 647 ntBASIC0.99□□□□□ -2.25
VSX2P58304 PCMTD1P1-201ENST00000455560 355 ntBASIC0.99□□□□□ -2.25
VSX2P58304 RNU7-66P-201ENST00000459469 62 ntBASIC0.99□□□□□ -2.25
VSX2P58304 snoU13.18-201ENST00000459483 104 ntBASIC0.99□□□□□ -2.25
VSX2P58304 RPS26P45-201ENST00000471748 340 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms