Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 MIR1185-2-201ENST00000408687 86 ntBASIC0.32□□□□□ -2.36
CLDN12P56749 AC092628.1-201ENST00000436250 252 ntBASIC0.32□□□□□ -2.36
CLDN12P56749 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
CLDN12P56749 RNU6-1132P-201ENST00000459214 107 ntBASIC0.32□□□□□ -2.36
CLDN12P56749 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.32□□□□□ -2.36
CLDN12P56749 RNU6-405P-201ENST00000516637 110 ntBASIC0.32□□□□□ -2.36
CLDN12P56749 AC027419.1-201ENST00000522976 328 ntBASIC0.32□□□□□ -2.36
CLDN12P56749 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.32□□□□□ -2.36
CLDN12P56749 SNORA4-201ENST00000584302 138 ntBASIC0.32□□□□□ -2.36
CLDN12P56749 AL512605.2-201ENST00000592972 256 ntBASIC0.32□□□□□ -2.36
CLDN12P56749 AL136317.1-201ENST00000612653 226 ntBASIC0.32□□□□□ -2.36
CLDN12P56749 RMST_2.1-201ENST00000617263 136 ntBASIC0.32□□□□□ -2.36
CLDN12P56749 AC009161.2-201ENST00000624626 138 ntBASIC0.32□□□□□ -2.36
CLDN12P56749 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.32□□□□□ -2.36
CLDN12P56749 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
CLDN12P56749 Y_RNA.116-201ENST00000363292 103 ntBASIC0.31□□□□□ -2.36
CLDN12P56749 RNU4-28P-201ENST00000364739 141 ntBASIC0.31□□□□□ -2.36
CLDN12P56749 RNU6-42P-201ENST00000384165 107 ntBASIC0.31□□□□□ -2.36
CLDN12P56749 RNU6-1067P-201ENST00000384752 107 ntBASIC0.31□□□□□ -2.36
CLDN12P56749 SNORD99-201ENST00000408612 74 ntBASIC0.31□□□□□ -2.36
CLDN12P56749 RNA5SP504-201ENST00000410676 117 ntBASIC0.31□□□□□ -2.36
CLDN12P56749 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.31□□□□□ -2.36
CLDN12P56749 AL033528.1-201ENST00000453780 140 ntBASIC0.31□□□□□ -2.36
CLDN12P56749 AL356010.1-201ENST00000456364 102 ntBASIC0.31□□□□□ -2.36
CLDN12P56749 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.31□□□□□ -2.36
CLDN12P56749 RNA5SP436-201ENST00000516020 115 ntBASIC0.31□□□□□ -2.36
CLDN12P56749 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.31□□□□□ -2.36
CLDN12P56749 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.31□□□□□ -2.36
CLDN12P56749 Z84480.1-201ENST00000605131 311 ntBASIC0.31□□□□□ -2.36
CLDN12P56749 AC092354.1-201ENST00000606057 376 ntBASIC0.31□□□□□ -2.36
CLDN12P56749 AL391834.2-201ENST00000609982 546 ntBASIC0.31□□□□□ -2.36
CLDN12P56749 MIR6513-201ENST00000621188 64 ntBASIC0.31□□□□□ -2.36
CLDN12P56749 AC106754.1-201ENST00000562632 1513 ntBASIC0.3□□□□□ -2.36
CLDN12P56749 AC090625.1-201ENST00000357130 210 ntBASIC0.3□□□□□ -2.36
CLDN12P56749 RNU6-1335P-201ENST00000365426 107 ntBASIC0.3□□□□□ -2.36
CLDN12P56749 MTCO2P34-201ENST00000421994 607 ntBASIC0.3□□□□□ -2.36
CLDN12P56749 RPL31P35-201ENST00000431058 377 ntBASIC0.3□□□□□ -2.36
CLDN12P56749 RPL23AP50-201ENST00000434149 455 ntBASIC0.3□□□□□ -2.36
CLDN12P56749 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.3□□□□□ -2.36
CLDN12P56749 MTCO1P19-201ENST00000443487 500 ntBASIC0.3□□□□□ -2.36
CLDN12P56749 SNORD11.1-201ENST00000459482 85 ntBASIC0.3□□□□□ -2.36
CLDN12P56749 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.3□□□□□ -2.36
CLDN12P56749 AP002963.1-201ENST00000530590 184 ntBASIC0.3□□□□□ -2.36
CLDN12P56749 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.3□□□□□ -2.36
CLDN12P56749 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.3□□□□□ -2.36
CLDN12P56749 AC011458.1-201ENST00000604034 617 ntBASIC0.3□□□□□ -2.36
CLDN12P56749 AC243829.3-201ENST00000622177 108 ntBASIC0.3□□□□□ -2.36
CLDN12P56749 SNORD115-8-201ENST00000363856 82 ntBASIC0.29□□□□□ -2.36
CLDN12P56749 SNORD115-38-201ENST00000365037 82 ntBASIC0.29□□□□□ -2.36
CLDN12P56749 RNU6-793P-201ENST00000384233 104 ntBASIC0.29□□□□□ -2.36
CLDN12P56749 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.29□□□□□ -2.36
CLDN12P56749 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.29□□□□□ -2.36
CLDN12P56749 CALM2P4-201ENST00000430810 426 ntBASIC0.29□□□□□ -2.36
CLDN12P56749 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.29□□□□□ -2.36
CLDN12P56749 AC005178.1-201ENST00000508392 440 ntBASIC0.29□□□□□ -2.36
CLDN12P56749 SNORD111.1-201ENST00000516421 86 ntBASIC0.29□□□□□ -2.36
CLDN12P56749 RNU6-1198P-201ENST00000516904 67 ntBASIC0.29□□□□□ -2.36
CLDN12P56749 RNA5SP454-201ENST00000517231 127 ntBASIC0.29□□□□□ -2.36
CLDN12P56749 MTND4LP26-201ENST00000518144 282 ntBASIC0.29□□□□□ -2.36
CLDN12P56749 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.29□□□□□ -2.36
CLDN12P56749 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.29□□□□□ -2.36
CLDN12P56749 SCOCP1-201ENST00000554676 349 ntBASIC0.29□□□□□ -2.36
CLDN12P56749 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.29□□□□□ -2.36
CLDN12P56749 AL096861.1-201ENST00000610899 123 ntBASIC0.29□□□□□ -2.36
CLDN12P56749 AC022709.1-201ENST00000615967 87 ntBASIC0.29□□□□□ -2.36
CLDN12P56749 RNA5SP264-201ENST00000363115 107 ntBASIC0.28□□□□□ -2.36
CLDN12P56749 Y_RNA.265-201ENST00000364677 108 ntBASIC0.28□□□□□ -2.36
CLDN12P56749 RNU6-517P-201ENST00000384362 110 ntBASIC0.28□□□□□ -2.36
CLDN12P56749 MIR518E-201ENST00000385252 88 ntBASIC0.28□□□□□ -2.36
CLDN12P56749 U8.16-201ENST00000391279 133 ntBASIC0.28□□□□□ -2.36
CLDN12P56749 AL049545.1-201ENST00000401856 572 ntBASIC0.28□□□□□ -2.36
CLDN12P56749 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.28□□□□□ -2.36
CLDN12P56749 AC133104.1-201ENST00000429100 218 ntBASIC0.28□□□□□ -2.36
CLDN12P56749 MTND3P9-201ENST00000429526 346 ntBASIC0.28□□□□□ -2.36
CLDN12P56749 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.28□□□□□ -2.36
CLDN12P56749 AF186996.7-201ENST00000492781 209 ntBASIC0.28□□□□□ -2.36
CLDN12P56749 OR9P1P-201ENST00000496431 281 ntBASIC0.28□□□□□ -2.36
CLDN12P56749 MTND1P5-201ENST00000517906 940 ntBASIC0.28□□□□□ -2.36
CLDN12P56749 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
CLDN12P56749 HIF1AP1-201ENST00000553642 175 ntBASIC0.28□□□□□ -2.36
CLDN12P56749 AC131055.1-201ENST00000584626 316 ntBASIC0.28□□□□□ -2.36
CLDN12P56749 AC010620.1-201ENST00000601088 1102 ntBASIC0.28□□□□□ -2.36
CLDN12P56749 AC234772.3-201ENST00000602277 528 ntBASIC0.28□□□□□ -2.36
CLDN12P56749 SEPT14P17-201ENST00000617978 177 ntBASIC0.28□□□□□ -2.36
CLDN12P56749 MIR6516-201ENST00000630554 81 ntBASIC0.28□□□□□ -2.36
CLDN12P56749 ZNF204P-201ENST00000416749 2397 ntBASIC0.27□□□□□ -2.37
CLDN12P56749 Y_RNA.122-201ENST00000363331 96 ntBASIC0.27□□□□□ -2.37
CLDN12P56749 Y_RNA.354-201ENST00000365448 111 ntBASIC0.27□□□□□ -2.37
CLDN12P56749 RNU6-456P-201ENST00000384493 107 ntBASIC0.27□□□□□ -2.37
CLDN12P56749 SNORD73A-201ENST00000386062 65 ntBASIC0.27□□□□□ -2.37
CLDN12P56749 RNU1-119P-201ENST00000391122 165 ntBASIC0.27□□□□□ -2.37
CLDN12P56749 RNU6-903P-201ENST00000391270 109 ntBASIC0.27□□□□□ -2.37
CLDN12P56749 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.27□□□□□ -2.37
CLDN12P56749 RNU6-195P-201ENST00000411352 109 ntBASIC0.27□□□□□ -2.37
CLDN12P56749 MTCYBP10-201ENST00000424905 650 ntBASIC0.27□□□□□ -2.37
CLDN12P56749 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.27□□□□□ -2.37
CLDN12P56749 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.27□□□□□ -2.37
CLDN12P56749 MTND4P32-201ENST00000437189 1237 ntBASIC0.27□□□□□ -2.37
CLDN12P56749 MTCO3P38-201ENST00000468910 766 ntBASIC0.27□□□□□ -2.37
CLDN12P56749 RPL39P5-202ENST00000512505 151 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms