Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 snoU13.15-201ENST00000459407 104 ntBASIC3.06□□□□□ -1.92
ATXN1P54253 AC107626.1-201ENST00000471084 183 ntBASIC3.06□□□□□ -1.92
ATXN1P54253 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.06□□□□□ -1.92
ATXN1P54253 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.06□□□□□ -1.92
ATXN1P54253 ACA59.2-201ENST00000517061 156 ntBASIC3.06□□□□□ -1.92
ATXN1P54253 AL590705.4-201ENST00000532209 134 ntBASIC3.06□□□□□ -1.92
ATXN1P54253 AL442163.3-201ENST00000554110 156 ntBASIC3.06□□□□□ -1.92
ATXN1P54253 AC090616.3-201ENST00000582184 217 ntBASIC3.06□□□□□ -1.92
ATXN1P54253 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.06□□□□□ -1.92
ATXN1P54253 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.06□□□□□ -1.92
ATXN1P54253 MIR1245B-201ENST00000636115 69 ntBASIC3.06□□□□□ -1.92
ATXN1P54253 MIR3529-201ENST00000637713 78 ntBASIC3.06□□□□□ -1.92
ATXN1P54253 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ATXN1P54253 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
ATXN1P54253 RNU6-653P-201ENST00000363074 106 ntBASIC3.05□□□□□ -1.92
ATXN1P54253 RNU6-461P-201ENST00000364195 107 ntBASIC3.05□□□□□ -1.92
ATXN1P54253 RNU4-11P-201ENST00000365287 132 ntBASIC3.05□□□□□ -1.92
ATXN1P54253 RNU6-573P-201ENST00000383938 106 ntBASIC3.05□□□□□ -1.92
ATXN1P54253 Y_RNA.563-201ENST00000384707 108 ntBASIC3.05□□□□□ -1.92
ATXN1P54253 MIR147B-201ENST00000390185 80 ntBASIC3.05□□□□□ -1.92
ATXN1P54253 AC092427.1-202ENST00000430569 476 ntBASIC3.05□□□□□ -1.92
ATXN1P54253 SNORD2.1-201ENST00000458762 69 ntBASIC3.05□□□□□ -1.92
ATXN1P54253 RN7SKP210-201ENST00000459176 261 ntBASIC3.05□□□□□ -1.92
ATXN1P54253 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.05□□□□□ -1.92
ATXN1P54253 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.05□□□□□ -1.92
ATXN1P54253 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.05□□□□□ -1.92
ATXN1P54253 SNORA31.23-201ENST00000517219 133 ntBASIC3.05□□□□□ -1.92
ATXN1P54253 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.05□□□□□ -1.92
ATXN1P54253 AC060766.3-201ENST00000591442 263 ntBASIC3.05□□□□□ -1.92
ATXN1P54253 AC091152.3-201ENST00000604227 325 ntBASIC3.05□□□□□ -1.92
ATXN1P54253 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.05□□□□□ -1.92
ATXN1P54253 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ATXN1P54253 AC009487.2-201ENST00000420969 6821 ntBASIC3.05□□□□□ -1.92
ATXN1P54253 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
ATXN1P54253 Y_RNA.446-201ENST00000384178 104 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 RNU6-1144P-201ENST00000384247 104 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 MIR544A-201ENST00000384855 91 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 RNU2-2P-201ENST00000410396 191 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ATXN1P54253 AC007969.2-201ENST00000441891 191 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 AL441985.1-201ENST00000457727 251 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 SNRPGP7-201ENST00000469016 106 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.04□□□□□ -1.92
ATXN1P54253 AC091959.1-201ENST00000495857 238 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 RN7SKP43-201ENST00000516173 320 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.04□□□□□ -1.92
ATXN1P54253 MIR3117-201ENST00000584034 78 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 MIR4506-201ENST00000584693 77 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 RNU2-4P-201ENST00000606190 192 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 AC005828.6-201ENST00000606610 232 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 U2.15-201ENST00000611544 191 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 U2.16-201ENST00000613119 191 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 U2.12-201ENST00000613778 191 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 U2.9-201ENST00000615427 191 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 U2.11-201ENST00000616345 191 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 U2.2-201ENST00000616535 191 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 U2.3-201ENST00000617785 191 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 U2.19-201ENST00000618602 191 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 RNU2-1-201ENST00000618664 191 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 U2.6-201ENST00000619225 191 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 U2.5-201ENST00000619465 191 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 MIR7111-201ENST00000619751 72 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 U2.10-201ENST00000620268 191 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
ATXN1P54253 AC010329.5-201ENST00000623497 2174 ntBASIC3.04□□□□□ -1.92
ATXN1P54253 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.03□□□□□ -1.92
ATXN1P54253 MIR450A1-201ENST00000362262 91 ntBASIC3.03□□□□□ -1.92
ATXN1P54253 RNU4-90P-201ENST00000362773 141 ntBASIC3.03□□□□□ -1.92
ATXN1P54253 RNA5SP173-201ENST00000364857 136 ntBASIC3.03□□□□□ -1.92
ATXN1P54253 U8.6-201ENST00000364939 135 ntBASIC3.03□□□□□ -1.92
ATXN1P54253 Y_RNA.420-201ENST00000384043 110 ntBASIC3.03□□□□□ -1.92
ATXN1P54253 RNU6-968P-201ENST00000384076 107 ntBASIC3.03□□□□□ -1.92
ATXN1P54253 RNU6-843P-201ENST00000384454 104 ntBASIC3.03□□□□□ -1.92
ATXN1P54253 Y_RNA.571-201ENST00000384753 98 ntBASIC3.03□□□□□ -1.92
ATXN1P54253 SNORA26.2-201ENST00000390922 122 ntBASIC3.03□□□□□ -1.92
ATXN1P54253 AL357139.1-201ENST00000407792 426 ntBASIC3.03□□□□□ -1.92
ATXN1P54253 EIF1AXP1-201ENST00000419267 435 ntBASIC3.03□□□□□ -1.92
ATXN1P54253 AC024067.1-201ENST00000426199 223 ntBASIC3.03□□□□□ -1.92
ATXN1P54253 AL603825.1-201ENST00000438481 80 ntBASIC3.03□□□□□ -1.92
ATXN1P54253 UQCRBP2-201ENST00000447827 297 ntBASIC3.03□□□□□ -1.92
ATXN1P54253 RPL23AP3-201ENST00000453844 468 ntBASIC3.03□□□□□ -1.92
ATXN1P54253 snoU13.23-201ENST00000458863 104 ntBASIC3.03□□□□□ -1.92
ATXN1P54253 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.03□□□□□ -1.92
ATXN1P54253 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.03□□□□□ -1.92
ATXN1P54253 RNA5SP76-201ENST00000516277 87 ntBASIC3.03□□□□□ -1.92
ATXN1P54253 Y_RNA.694-201ENST00000516677 117 ntBASIC3.03□□□□□ -1.92
ATXN1P54253 SUMO2P18-201ENST00000518873 252 ntBASIC3.03□□□□□ -1.92
ATXN1P54253 AP003327.1-201ENST00000529684 127 ntBASIC3.03□□□□□ -1.92
ATXN1P54253 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.03□□□□□ -1.92
ATXN1P54253 MIR4659A-201ENST00000580269 81 ntBASIC3.03□□□□□ -1.92
ATXN1P54253 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.03□□□□□ -1.92
ATXN1P54253 AC243829.7-201ENST00000633081 225 ntBASIC3.03□□□□□ -1.92
ATXN1P54253 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.03□□□□□ -1.92
ATXN1P54253 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
ATXN1P54253 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
ATXN1P54253 SNORD32A-201ENST00000364805 84 ntBASIC3.02□□□□□ -1.93
ATXN1P54253 RNU6-326P-201ENST00000365480 107 ntBASIC3.02□□□□□ -1.93
ATXN1P54253 RNU6-926P-201ENST00000384075 107 ntBASIC3.02□□□□□ -1.93
ATXN1P54253 MIR196B-201ENST00000384852 84 ntBASIC3.02□□□□□ -1.93
ATXN1P54253 SNORA12.1-201ENST00000390873 148 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms