Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 MIR219B-201ENST00000637023 88 ntBASIC1.98□□□□□ -2.09
HNF4AP41235 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
HNF4AP41235 MTND5P16-201ENST00000460269 1703 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 RNA5SP160-201ENST00000364866 120 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 RNU6-234P-201ENST00000365229 104 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 RNU6-26P-201ENST00000383985 107 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 RNU6-708P-201ENST00000384217 107 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 MIR153-2-201ENST00000385225 87 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
HNF4AP41235 SNORA69.1-201ENST00000390904 137 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 RNA5SP213-201ENST00000391031 106 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 SNORA12-201ENST00000391162 147 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 RNU6-1093P-201ENST00000391194 107 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 MIR208B-201ENST00000401172 77 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 MRPL42P3-201ENST00000401492 326 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 Y_RNA.592-201ENST00000410274 109 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 Y_RNA.605-201ENST00000410577 105 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 AC009310.1-201ENST00000414414 451 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 AL445305.1-201ENST00000432577 575 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.97□□□□□ -2.09
HNF4AP41235 AP000870.1-201ENST00000472927 406 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 RNU6-567P-201ENST00000516746 107 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 RNU6-58P-201ENST00000517143 103 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HNF4AP41235 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.97□□□□□ -2.09
HNF4AP41235 GNAI2P1-201ENST00000541815 315 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 UBL5P4-201ENST00000562584 236 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.97□□□□□ -2.09
HNF4AP41235 MIR5188-201ENST00000583467 113 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 AC013412.1-201ENST00000610687 192 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.97□□□□□ -2.09
HNF4AP41235 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.97□□□□□ -2.09
HNF4AP41235 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
HNF4AP41235 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
HNF4AP41235 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
HNF4AP41235 Y_RNA.39-201ENST00000362620 98 ntBASIC1.96□□□□□ -2.1
HNF4AP41235 SNORA63C-201ENST00000364578 129 ntBASIC1.96□□□□□ -2.1
HNF4AP41235 MIR606-201ENST00000384851 96 ntBASIC1.96□□□□□ -2.1
HNF4AP41235 SNORA48.1-201ENST00000390879 135 ntBASIC1.96□□□□□ -2.1
HNF4AP41235 AL139156.1-201ENST00000412785 841 ntBASIC1.96□□□□□ -2.1
HNF4AP41235 RPS26P42-201ENST00000413485 326 ntBASIC1.96□□□□□ -2.1
HNF4AP41235 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.96□□□□□ -2.1
HNF4AP41235 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.96□□□□□ -2.1
HNF4AP41235 RNU2-44P-201ENST00000516795 194 ntBASIC1.96□□□□□ -2.1
HNF4AP41235 AC144568.1-201ENST00000520139 137 ntBASIC1.96□□□□□ -2.1
HNF4AP41235 IGKV3-31-201ENST00000523109 329 ntBASIC1.96□□□□□ -2.1
HNF4AP41235 MIR4680-201ENST00000580906 66 ntBASIC1.96□□□□□ -2.1
HNF4AP41235 MIR3935-201ENST00000583472 104 ntBASIC1.96□□□□□ -2.1
HNF4AP41235 AC016727.2-201ENST00000603988 621 ntBASIC1.96□□□□□ -2.1
HNF4AP41235 AC025754.2-201ENST00000606491 432 ntBASIC1.96□□□□□ -2.1
HNF4AP41235 AC137590.2-201ENST00000619709 240 ntBASIC1.96□□□□□ -2.1
HNF4AP41235 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.96□□□□□ -2.1
HNF4AP41235 AC005592.1-201ENST00000566527 1640 ntBASIC1.95□□□□□ -2.1
HNF4AP41235 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HNF4AP41235 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
HNF4AP41235 Y_RNA.158-201ENST00000363651 101 ntBASIC1.95□□□□□ -2.1
HNF4AP41235 Y_RNA.162-201ENST00000363683 102 ntBASIC1.95□□□□□ -2.1
HNF4AP41235 SNORD115-8-201ENST00000363856 82 ntBASIC1.95□□□□□ -2.1
HNF4AP41235 SNORD115-38-201ENST00000365037 82 ntBASIC1.95□□□□□ -2.1
HNF4AP41235 Y_RNA.319-201ENST00000365138 92 ntBASIC1.95□□□□□ -2.1
HNF4AP41235 RNU6-639P-201ENST00000384074 107 ntBASIC1.95□□□□□ -2.1
HNF4AP41235 RNU6-738P-201ENST00000384531 106 ntBASIC1.95□□□□□ -2.1
HNF4AP41235 RNU6-541P-201ENST00000384709 110 ntBASIC1.95□□□□□ -2.1
HNF4AP41235 MIR10B-201ENST00000385011 110 ntBASIC1.95□□□□□ -2.1
HNF4AP41235 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.95□□□□□ -2.1
HNF4AP41235 AC113618.1-201ENST00000416747 285 ntBASIC1.95□□□□□ -2.1
HNF4AP41235 AC114482.1-201ENST00000418010 247 ntBASIC1.95□□□□□ -2.1
HNF4AP41235 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.95□□□□□ -2.1
HNF4AP41235 AC007215.1-201ENST00000464893 276 ntBASIC1.95□□□□□ -2.1
HNF4AP41235 RPS29P21-201ENST00000496272 170 ntBASIC1.95□□□□□ -2.1
HNF4AP41235 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HNF4AP41235 MIR449C-201ENST00000516047 92 ntBASIC1.95□□□□□ -2.1
HNF4AP41235 HSPE1P18-201ENST00000517602 280 ntBASIC1.95□□□□□ -2.1
HNF4AP41235 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.95□□□□□ -2.1
HNF4AP41235 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.95□□□□□ -2.1
HNF4AP41235 HSBP1P1-201ENST00000555205 166 ntBASIC1.95□□□□□ -2.1
HNF4AP41235 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.95□□□□□ -2.1
HNF4AP41235 AC006600.1-201ENST00000572529 153 ntBASIC1.95□□□□□ -2.1
HNF4AP41235 AC090617.3-201ENST00000573670 475 ntBASIC1.95□□□□□ -2.1
HNF4AP41235 SNRPGP19-201ENST00000603826 189 ntBASIC1.95□□□□□ -2.1
HNF4AP41235 AL360085.1-201ENST00000604713 532 ntBASIC1.95□□□□□ -2.1
HNF4AP41235 AC116312.1-201ENST00000606841 314 ntBASIC1.95□□□□□ -2.1
HNF4AP41235 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.95□□□□□ -2.1
HNF4AP41235 U2.1-201ENST00000618978 145 ntBASIC1.95□□□□□ -2.1
HNF4AP41235 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
HNF4AP41235 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HNF4AP41235 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
HNF4AP41235 AC092881.1-201ENST00000638218 2733 ntBASIC1.94□□□□□ -2.1
HNF4AP41235 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
HNF4AP41235 RNA5SP493-201ENST00000364115 91 ntBASIC1.94□□□□□ -2.1
HNF4AP41235 Y_RNA.422-201ENST00000384054 114 ntBASIC1.94□□□□□ -2.1
HNF4AP41235 SNORA70B-201ENST00000384210 135 ntBASIC1.94□□□□□ -2.1
HNF4AP41235 RNU6-281P-201ENST00000384212 103 ntBASIC1.94□□□□□ -2.1
HNF4AP41235 RNU6-1160P-201ENST00000384546 104 ntBASIC1.94□□□□□ -2.1
HNF4AP41235 Y_RNA.527-201ENST00000384573 102 ntBASIC1.94□□□□□ -2.1
HNF4AP41235 RNU6-159P-201ENST00000391080 106 ntBASIC1.94□□□□□ -2.1
HNF4AP41235 EIF1P2-201ENST00000428233 350 ntBASIC1.94□□□□□ -2.1
HNF4AP41235 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.94□□□□□ -2.1
HNF4AP41235 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.94□□□□□ -2.1
HNF4AP41235 HMGN2P18-201ENST00000450680 270 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms