Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AL008636.1-201ENST00000625038 1018 ntBASIC1.61□□□□□ -2.15
HMGCLP35914 MIR1302-1-201ENST00000637932 143 ntBASIC1.61□□□□□ -2.15
HMGCLP35914 AC006026.1-201ENST00000444025 1803 ntBASIC1.61□□□□□ -2.15
HMGCLP35914 Y_RNA.106-201ENST00000363189 100 ntBASIC1.6□□□□□ -2.15
HMGCLP35914 RNU6-873P-201ENST00000363833 107 ntBASIC1.6□□□□□ -2.15
HMGCLP35914 RNU6-280P-201ENST00000364145 104 ntBASIC1.6□□□□□ -2.15
HMGCLP35914 RNU6-743P-201ENST00000364151 106 ntBASIC1.6□□□□□ -2.15
HMGCLP35914 RNU6-975P-201ENST00000384296 105 ntBASIC1.6□□□□□ -2.15
HMGCLP35914 RNU6-997P-201ENST00000384725 107 ntBASIC1.6□□□□□ -2.15
HMGCLP35914 Y_RNA.577-201ENST00000384794 101 ntBASIC1.6□□□□□ -2.15
HMGCLP35914 MIR559-201ENST00000385188 96 ntBASIC1.6□□□□□ -2.15
HMGCLP35914 MIR549A-201ENST00000385268 96 ntBASIC1.6□□□□□ -2.15
HMGCLP35914 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
HMGCLP35914 AL033519.2-201ENST00000403958 392 ntBASIC1.6□□□□□ -2.15
HMGCLP35914 AC092473.1-201ENST00000441098 221 ntBASIC1.6□□□□□ -2.15
HMGCLP35914 HMGN2P23-201ENST00000456759 269 ntBASIC1.6□□□□□ -2.15
HMGCLP35914 SNORD19B-201ENST00000459623 84 ntBASIC1.6□□□□□ -2.15
HMGCLP35914 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.6□□□□□ -2.15
HMGCLP35914 MTND3P22-201ENST00000510932 243 ntBASIC1.6□□□□□ -2.15
HMGCLP35914 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.6□□□□□ -2.15
HMGCLP35914 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.6□□□□□ -2.15
HMGCLP35914 RAB11AP2-201ENST00000545905 639 ntBASIC1.6□□□□□ -2.15
HMGCLP35914 RRN3P3-201ENST00000549207 578 ntBASIC1.6□□□□□ -2.15
HMGCLP35914 MIR5006-201ENST00000583027 110 ntBASIC1.6□□□□□ -2.15
HMGCLP35914 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.6□□□□□ -2.15
HMGCLP35914 7SK.7-201ENST00000603504 247 ntBASIC1.6□□□□□ -2.15
HMGCLP35914 AC080078.3-201ENST00000605407 463 ntBASIC1.6□□□□□ -2.15
HMGCLP35914 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.6□□□□□ -2.15
HMGCLP35914 AL353149.1-201ENST00000610667 244 ntBASIC1.6□□□□□ -2.15
HMGCLP35914 MIR7843-201ENST00000622274 79 ntBASIC1.6□□□□□ -2.15
HMGCLP35914 RNU6-545P-201ENST00000362681 104 ntBASIC1.59□□□□□ -2.15
HMGCLP35914 RNU5F-3P-201ENST00000363767 117 ntBASIC1.59□□□□□ -2.15
HMGCLP35914 RNU6-890P-201ENST00000384121 107 ntBASIC1.59□□□□□ -2.15
HMGCLP35914 RNU6-1235P-201ENST00000384559 107 ntBASIC1.59□□□□□ -2.15
HMGCLP35914 MT-TD-201ENST00000387419 68 ntBASIC1.59□□□□□ -2.15
HMGCLP35914 MIR764-201ENST00000390811 85 ntBASIC1.59□□□□□ -2.15
HMGCLP35914 RNA5SP212-201ENST00000391223 107 ntBASIC1.59□□□□□ -2.15
HMGCLP35914 MIR320B2-201ENST00000408479 138 ntBASIC1.59□□□□□ -2.15
HMGCLP35914 AC093019.1-201ENST00000443135 252 ntBASIC1.59□□□□□ -2.15
HMGCLP35914 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.59□□□□□ -2.15
HMGCLP35914 Y_RNA.632-201ENST00000459189 102 ntBASIC1.59□□□□□ -2.15
HMGCLP35914 RNU6-498P-201ENST00000459468 107 ntBASIC1.59□□□□□ -2.15
HMGCLP35914 AC091179.3-201ENST00000474761 144 ntBASIC1.59□□□□□ -2.15
HMGCLP35914 AC008834.1-201ENST00000511612 175 ntBASIC1.59□□□□□ -2.15
HMGCLP35914 RNU6-470P-201ENST00000515954 104 ntBASIC1.59□□□□□ -2.15
HMGCLP35914 RNU6-970P-201ENST00000516312 107 ntBASIC1.59□□□□□ -2.15
HMGCLP35914 Y_RNA.706-201ENST00000516933 99 ntBASIC1.59□□□□□ -2.15
HMGCLP35914 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.59□□□□□ -2.15
HMGCLP35914 GNAI2P1-201ENST00000541815 315 ntBASIC1.59□□□□□ -2.15
HMGCLP35914 UBL5P4-201ENST00000562584 236 ntBASIC1.59□□□□□ -2.15
HMGCLP35914 AC090617.3-201ENST00000573670 475 ntBASIC1.59□□□□□ -2.15
HMGCLP35914 AC125232.2-201ENST00000592457 143 ntBASIC1.59□□□□□ -2.15
HMGCLP35914 C8orf59P2-201ENST00000603441 271 ntBASIC1.59□□□□□ -2.15
HMGCLP35914 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.59□□□□□ -2.15
HMGCLP35914 AC068205.3-201ENST00000636385 468 ntBASIC1.59□□□□□ -2.15
HMGCLP35914 AC112487.2-201ENST00000637950 304 ntBASIC1.59□□□□□ -2.15
HMGCLP35914 RNU6-1145P-201ENST00000384246 107 ntBASIC1.58□□□□□ -2.16
HMGCLP35914 Y_RNA.509-201ENST00000384506 99 ntBASIC1.58□□□□□ -2.16
HMGCLP35914 SNORA8-201ENST00000384574 139 ntBASIC1.58□□□□□ -2.16
HMGCLP35914 MIR329-1-201ENST00000385028 80 ntBASIC1.58□□□□□ -2.16
HMGCLP35914 SNORA48.1-201ENST00000390879 135 ntBASIC1.58□□□□□ -2.16
HMGCLP35914 RNU6-700P-201ENST00000391043 107 ntBASIC1.58□□□□□ -2.16
HMGCLP35914 AL117342.1-201ENST00000404861 406 ntBASIC1.58□□□□□ -2.16
HMGCLP35914 SNRPEP8-201ENST00000442866 260 ntBASIC1.58□□□□□ -2.16
HMGCLP35914 Y_RNA.653-201ENST00000459091 95 ntBASIC1.58□□□□□ -2.16
HMGCLP35914 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.58□□□□□ -2.16
HMGCLP35914 AC004584.2-201ENST00000570407 410 ntBASIC1.58□□□□□ -2.16
HMGCLP35914 AC005786.1-201ENST00000588553 154 ntBASIC1.58□□□□□ -2.16
HMGCLP35914 AC025754.2-201ENST00000606491 432 ntBASIC1.58□□□□□ -2.16
HMGCLP35914 SNORD11B-201ENST00000607707 90 ntBASIC1.58□□□□□ -2.16
HMGCLP35914 AL590240.4-201ENST00000616908 390 ntBASIC1.58□□□□□ -2.16
HMGCLP35914 AC087588.2-201ENST00000617667 426 ntBASIC1.58□□□□□ -2.16
HMGCLP35914 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HMGCLP35914 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.58□□□□□ -2.16
HMGCLP35914 MIR410-201ENST00000362222 80 ntBASIC1.57□□□□□ -2.16
HMGCLP35914 RNU4-79P-201ENST00000362764 141 ntBASIC1.57□□□□□ -2.16
HMGCLP35914 Y_RNA.187-201ENST00000363918 113 ntBASIC1.57□□□□□ -2.16
HMGCLP35914 RNA5SP363-201ENST00000365072 115 ntBASIC1.57□□□□□ -2.16
HMGCLP35914 Y_RNA.384-201ENST00000383909 102 ntBASIC1.57□□□□□ -2.16
HMGCLP35914 RNU6-793P-201ENST00000384233 104 ntBASIC1.57□□□□□ -2.16
HMGCLP35914 SNORA67.5-201ENST00000391036 107 ntBASIC1.57□□□□□ -2.16
HMGCLP35914 MIR934-201ENST00000401241 83 ntBASIC1.57□□□□□ -2.16
HMGCLP35914 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.57□□□□□ -2.16
HMGCLP35914 AC139712.2-201ENST00000424302 339 ntBASIC1.57□□□□□ -2.16
HMGCLP35914 AL353997.1-201ENST00000432936 108 ntBASIC1.57□□□□□ -2.16
HMGCLP35914 SNORD13-201ENST00000459299 104 ntBASIC1.57□□□□□ -2.16
HMGCLP35914 SNORA25.14-201ENST00000516481 132 ntBASIC1.57□□□□□ -2.16
HMGCLP35914 MIR2355-201ENST00000517199 87 ntBASIC1.57□□□□□ -2.16
HMGCLP35914 AC093027.1-201ENST00000546698 429 ntBASIC1.57□□□□□ -2.16
HMGCLP35914 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.57□□□□□ -2.16
HMGCLP35914 AC022254.1-201ENST00000567857 235 ntBASIC1.57□□□□□ -2.16
HMGCLP35914 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.57□□□□□ -2.16
HMGCLP35914 AC138305.3-201ENST00000624988 240 ntBASIC1.57□□□□□ -2.16
HMGCLP35914 MTND4LP32-201ENST00000636111 270 ntBASIC1.57□□□□□ -2.16
HMGCLP35914 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.57□□□□□ -2.16
HMGCLP35914 MTND5P16-201ENST00000460269 1703 ntBASIC1.57□□□□□ -2.16
HMGCLP35914 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
HMGCLP35914 RNU6-222P-201ENST00000362438 107 ntBASIC1.56□□□□□ -2.16
HMGCLP35914 RNU6-1115P-201ENST00000362490 106 ntBASIC1.56□□□□□ -2.16
HMGCLP35914 RNU4-73P-201ENST00000363164 141 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms