Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AL353572.1-201ENST00000442490 417 ntBASIC1.36□□□□□ -2.19
RFC4P35249 OR2AQ1P-201ENST00000451972 200 ntBASIC1.36□□□□□ -2.19
RFC4P35249 RNA5SP384-201ENST00000516615 116 ntBASIC1.36□□□□□ -2.19
RFC4P35249 MIR4753-201ENST00000585119 83 ntBASIC1.36□□□□□ -2.19
RFC4P35249 AC211469.2-201ENST00000605461 205 ntBASIC1.36□□□□□ -2.19
RFC4P35249 TCL6_2.1-201ENST00000615162 119 ntBASIC1.36□□□□□ -2.19
RFC4P35249 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.35□□□□□ -2.19
RFC4P35249 SNORD50.1-201ENST00000362987 71 ntBASIC1.35□□□□□ -2.19
RFC4P35249 RNU1-96P-201ENST00000364163 162 ntBASIC1.35□□□□□ -2.19
RFC4P35249 Y_RNA.393-201ENST00000383936 102 ntBASIC1.35□□□□□ -2.19
RFC4P35249 MIR300-201ENST00000401138 83 ntBASIC1.35□□□□□ -2.19
RFC4P35249 RNU2-7P-201ENST00000410794 178 ntBASIC1.35□□□□□ -2.19
RFC4P35249 CST2P1-201ENST00000425770 87 ntBASIC1.35□□□□□ -2.19
RFC4P35249 MTCO3P18-201ENST00000440206 761 ntBASIC1.35□□□□□ -2.19
RFC4P35249 JTBP1-201ENST00000441314 247 ntBASIC1.35□□□□□ -2.19
RFC4P35249 PCMTD1P1-201ENST00000455560 355 ntBASIC1.35□□□□□ -2.19
RFC4P35249 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.35□□□□□ -2.19
RFC4P35249 RNU7-66P-201ENST00000459469 62 ntBASIC1.35□□□□□ -2.19
RFC4P35249 AC067942.3-201ENST00000512025 362 ntBASIC1.35□□□□□ -2.19
RFC4P35249 AC008269.2-201ENST00000561915 1105 ntBASIC1.35□□□□□ -2.19
RFC4P35249 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.35□□□□□ -2.19
RFC4P35249 MIR5000-201ENST00000577717 103 ntBASIC1.35□□□□□ -2.19
RFC4P35249 MIR3672-201ENST00000584290 82 ntBASIC1.35□□□□□ -2.19
RFC4P35249 AC012557.2-201ENST00000605919 418 ntBASIC1.35□□□□□ -2.19
RFC4P35249 AL138726.1-201ENST00000614873 333 ntBASIC1.35□□□□□ -2.19
RFC4P35249 AC015540.1-201ENST00000615828 501 ntBASIC1.35□□□□□ -2.19
RFC4P35249 AC126177.8-201ENST00000618339 1015 ntBASIC1.35□□□□□ -2.19
RFC4P35249 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.35□□□□□ -2.19
RFC4P35249 ZNF204P-201ENST00000416749 2397 ntBASIC1.35□□□□□ -2.19
RFC4P35249 RNU6-1305P-201ENST00000364353 104 ntBASIC1.34□□□□□ -2.19
RFC4P35249 Y_RNA.318-201ENST00000365131 97 ntBASIC1.34□□□□□ -2.19
RFC4P35249 RNU6-128P-201ENST00000383976 107 ntBASIC1.34□□□□□ -2.19
RFC4P35249 RPS26P42-201ENST00000413485 326 ntBASIC1.34□□□□□ -2.19
RFC4P35249 AC245047.4-201ENST00000433189 144 ntBASIC1.34□□□□□ -2.19
RFC4P35249 Z82188.1-201ENST00000436709 154 ntBASIC1.34□□□□□ -2.19
RFC4P35249 HSPE1P9-201ENST00000440046 311 ntBASIC1.34□□□□□ -2.19
RFC4P35249 AC079140.2-201ENST00000506193 142 ntBASIC1.34□□□□□ -2.19
RFC4P35249 AC011406.1-201ENST00000512440 370 ntBASIC1.34□□□□□ -2.19
RFC4P35249 RNU6-256P-201ENST00000516747 97 ntBASIC1.34□□□□□ -2.19
RFC4P35249 RNU6-856P-201ENST00000516959 98 ntBASIC1.34□□□□□ -2.19
RFC4P35249 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.34□□□□□ -2.19
RFC4P35249 RAB11AP2-201ENST00000545905 639 ntBASIC1.34□□□□□ -2.19
RFC4P35249 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.34□□□□□ -2.19
RFC4P35249 AC019288.1-201ENST00000557918 224 ntBASIC1.34□□□□□ -2.19
RFC4P35249 AC026470.2-201ENST00000561492 181 ntBASIC1.34□□□□□ -2.19
RFC4P35249 AC011712.1-201ENST00000588959 234 ntBASIC1.34□□□□□ -2.19
RFC4P35249 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.34□□□□□ -2.19
RFC4P35249 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.34□□□□□ -2.19
RFC4P35249 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.34□□□□□ -2.19
RFC4P35249 SCARNA4-201ENST00000629045 128 ntBASIC1.34□□□□□ -2.19
RFC4P35249 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
RFC4P35249 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
RFC4P35249 RNU6-1105P-201ENST00000384774 107 ntBASIC1.33□□□□□ -2.2
RFC4P35249 AL117342.1-201ENST00000404861 406 ntBASIC1.33□□□□□ -2.2
RFC4P35249 AL591704.2-201ENST00000421658 181 ntBASIC1.33□□□□□ -2.2
RFC4P35249 AL445305.1-201ENST00000432577 575 ntBASIC1.33□□□□□ -2.2
RFC4P35249 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.33□□□□□ -2.2
RFC4P35249 AC009237.7-201ENST00000447357 229 ntBASIC1.33□□□□□ -2.2
RFC4P35249 NFU1P2-201ENST00000448700 469 ntBASIC1.33□□□□□ -2.2
RFC4P35249 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.33□□□□□ -2.2
RFC4P35249 AC079354.2-201ENST00000453523 154 ntBASIC1.33□□□□□ -2.2
RFC4P35249 AC007215.1-201ENST00000464893 276 ntBASIC1.33□□□□□ -2.2
RFC4P35249 HMGN2P9-201ENST00000476875 229 ntBASIC1.33□□□□□ -2.2
RFC4P35249 RNU6-273P-201ENST00000516937 96 ntBASIC1.33□□□□□ -2.2
RFC4P35249 RNA5SP437-201ENST00000517249 129 ntBASIC1.33□□□□□ -2.2
RFC4P35249 MIR3937-201ENST00000580135 106 ntBASIC1.33□□□□□ -2.2
RFC4P35249 AC069114.2-201ENST00000604699 304 ntBASIC1.33□□□□□ -2.2
RFC4P35249 SNORD114-21-201ENST00000606412 72 ntBASIC1.33□□□□□ -2.2
RFC4P35249 AC093783.1-201ENST00000612976 329 ntBASIC1.33□□□□□ -2.2
RFC4P35249 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
RFC4P35249 BX322639.1-202ENST00000423987 2213 ntBASIC1.33□□□□□ -2.2
RFC4P35249 AC010615.1-201ENST00000594254 1764 ntBASIC1.33□□□□□ -2.2
RFC4P35249 AC100821.1-201ENST00000523153 2479 ntBASIC1.32□□□□□ -2.2
RFC4P35249 RNU6-975P-201ENST00000384296 105 ntBASIC1.32□□□□□ -2.2
RFC4P35249 Y_RNA.530-201ENST00000384587 101 ntBASIC1.32□□□□□ -2.2
RFC4P35249 MIR520A-201ENST00000384862 85 ntBASIC1.32□□□□□ -2.2
RFC4P35249 MIR32-201ENST00000384965 70 ntBASIC1.32□□□□□ -2.2
RFC4P35249 MIR517A-201ENST00000385001 87 ntBASIC1.32□□□□□ -2.2
RFC4P35249 MIR548B-201ENST00000385247 97 ntBASIC1.32□□□□□ -2.2
RFC4P35249 RNU1-139P-201ENST00000391307 165 ntBASIC1.32□□□□□ -2.2
RFC4P35249 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.32□□□□□ -2.2
RFC4P35249 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.32□□□□□ -2.2
RFC4P35249 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.32□□□□□ -2.2
RFC4P35249 RPL26P26-201ENST00000480251 434 ntBASIC1.32□□□□□ -2.2
RFC4P35249 MTCO2P30-201ENST00000503662 364 ntBASIC1.32□□□□□ -2.2
RFC4P35249 RNU6-948P-201ENST00000516374 107 ntBASIC1.32□□□□□ -2.2
RFC4P35249 RNU1-117P-201ENST00000517041 158 ntBASIC1.32□□□□□ -2.2
RFC4P35249 AC109635.3-201ENST00000529536 185 ntBASIC1.32□□□□□ -2.2
RFC4P35249 AC005668.1-201ENST00000571142 476 ntBASIC1.32□□□□□ -2.2
RFC4P35249 SNORA77B-201ENST00000578179 125 ntBASIC1.32□□□□□ -2.2
RFC4P35249 MIR3942-201ENST00000585264 109 ntBASIC1.32□□□□□ -2.2
RFC4P35249 POLR3GP2-201ENST00000588366 668 ntBASIC1.32□□□□□ -2.2
RFC4P35249 SNRPGP20-201ENST00000604477 205 ntBASIC1.32□□□□□ -2.2
RFC4P35249 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.32□□□□□ -2.2
RFC4P35249 AC137590.2-201ENST00000619709 240 ntBASIC1.32□□□□□ -2.2
RFC4P35249 AC090617.10-201ENST00000624308 134 ntBASIC1.32□□□□□ -2.2
RFC4P35249 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.32□□□□□ -2.2
RFC4P35249 Y_RNA.3-201ENST00000362331 103 ntBASIC1.31□□□□□ -2.2
RFC4P35249 SNORA33-201ENST00000363664 130 ntBASIC1.31□□□□□ -2.2
RFC4P35249 Y_RNA.212-201ENST00000364177 102 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms