Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC137590.2-201ENST00000619709 240 ntBASIC0.56□□□□□ -2.32
RPA3P35244 MIR6734-201ENST00000621166 68 ntBASIC0.56□□□□□ -2.32
RPA3P35244 AC068787.1-201ENST00000623908 691 ntBASIC0.56□□□□□ -2.32
RPA3P35244 RNU6-1120P-201ENST00000362988 108 ntBASIC0.55□□□□□ -2.32
RPA3P35244 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.55□□□□□ -2.32
RPA3P35244 RNY3P10-201ENST00000384764 102 ntBASIC0.55□□□□□ -2.32
RPA3P35244 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
RPA3P35244 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.55□□□□□ -2.32
RPA3P35244 AL451046.2-201ENST00000403074 277 ntBASIC0.55□□□□□ -2.32
RPA3P35244 MTND2P18-201ENST00000419962 1030 ntBASIC0.55□□□□□ -2.32
RPA3P35244 TPT1P7-201ENST00000458300 517 ntBASIC0.55□□□□□ -2.32
RPA3P35244 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.55□□□□□ -2.32
RPA3P35244 RNU6-322P-201ENST00000516010 103 ntBASIC0.55□□□□□ -2.32
RPA3P35244 RNU7-99P-201ENST00000516271 62 ntBASIC0.55□□□□□ -2.32
RPA3P35244 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
RPA3P35244 APOOP3-201ENST00000536787 586 ntBASIC0.55□□□□□ -2.32
RPA3P35244 SCOCP1-201ENST00000554676 349 ntBASIC0.55□□□□□ -2.32
RPA3P35244 AL162424.1-201ENST00000602325 221 ntBASIC0.55□□□□□ -2.32
RPA3P35244 AC027449.1-201ENST00000608890 407 ntBASIC0.55□□□□□ -2.32
RPA3P35244 AC104465.1-201ENST00000611365 139 ntBASIC0.55□□□□□ -2.32
RPA3P35244 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
RPA3P35244 Y_RNA.116-201ENST00000363292 103 ntBASIC0.54□□□□□ -2.32
RPA3P35244 Y_RNA.159-201ENST00000363674 87 ntBASIC0.54□□□□□ -2.32
RPA3P35244 RNU6-1329P-201ENST00000365664 107 ntBASIC0.54□□□□□ -2.32
RPA3P35244 MT-TH-201ENST00000387441 69 ntBASIC0.54□□□□□ -2.32
RPA3P35244 RNU6-733P-201ENST00000410759 104 ntBASIC0.54□□□□□ -2.32
RPA3P35244 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.54□□□□□ -2.32
RPA3P35244 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.54□□□□□ -2.32
RPA3P35244 AL445305.1-201ENST00000432577 575 ntBASIC0.54□□□□□ -2.32
RPA3P35244 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.54□□□□□ -2.32
RPA3P35244 RPEP5-201ENST00000441137 268 ntBASIC0.54□□□□□ -2.32
RPA3P35244 RPL39P39-201ENST00000455840 151 ntBASIC0.54□□□□□ -2.32
RPA3P35244 RNU7-63P-201ENST00000459054 62 ntBASIC0.54□□□□□ -2.32
RPA3P35244 RNU7-21P-201ENST00000459430 62 ntBASIC0.54□□□□□ -2.32
RPA3P35244 MTND1P35-201ENST00000526739 508 ntBASIC0.54□□□□□ -2.32
RPA3P35244 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.54□□□□□ -2.32
RPA3P35244 SNORD11B-201ENST00000607707 90 ntBASIC0.54□□□□□ -2.32
RPA3P35244 AL136370.1-201ENST00000608166 691 ntBASIC0.54□□□□□ -2.32
RPA3P35244 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.53□□□□□ -2.32
RPA3P35244 SNORD87-201ENST00000364849 89 ntBASIC0.53□□□□□ -2.32
RPA3P35244 RNU6-996P-201ENST00000365438 107 ntBASIC0.53□□□□□ -2.32
RPA3P35244 RNU6-42P-201ENST00000384165 107 ntBASIC0.53□□□□□ -2.32
RPA3P35244 SNORA75.2-201ENST00000391138 150 ntBASIC0.53□□□□□ -2.32
RPA3P35244 SNORA75.3-201ENST00000391231 150 ntBASIC0.53□□□□□ -2.32
RPA3P35244 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.53□□□□□ -2.32
RPA3P35244 CALM2P4-201ENST00000430810 426 ntBASIC0.53□□□□□ -2.32
RPA3P35244 AC073415.1-201ENST00000449240 153 ntBASIC0.53□□□□□ -2.32
RPA3P35244 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.53□□□□□ -2.32
RPA3P35244 AC093850.1-201ENST00000454121 251 ntBASIC0.53□□□□□ -2.32
RPA3P35244 COX6CP6-201ENST00000490840 228 ntBASIC0.53□□□□□ -2.32
RPA3P35244 MTND1P5-201ENST00000517906 940 ntBASIC0.53□□□□□ -2.32
RPA3P35244 AP002001.1-203ENST00000534002 267 ntBASIC0.53□□□□□ -2.32
RPA3P35244 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.53□□□□□ -2.32
RPA3P35244 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.53□□□□□ -2.32
RPA3P35244 AL353765.1-201ENST00000605514 183 ntBASIC0.53□□□□□ -2.32
RPA3P35244 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.53□□□□□ -2.32
RPA3P35244 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.53□□□□□ -2.32
RPA3P35244 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
RPA3P35244 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.53□□□□□ -2.32
RPA3P35244 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
RPA3P35244 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
RPA3P35244 RNY1P14-201ENST00000384426 108 ntBASIC0.52□□□□□ -2.33
RPA3P35244 AL049545.1-201ENST00000401856 572 ntBASIC0.52□□□□□ -2.33
RPA3P35244 AL606923.1-201ENST00000406616 190 ntBASIC0.52□□□□□ -2.33
RPA3P35244 MIR1185-2-201ENST00000408687 86 ntBASIC0.52□□□□□ -2.33
RPA3P35244 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.52□□□□□ -2.33
RPA3P35244 AL035398.1-201ENST00000430869 322 ntBASIC0.52□□□□□ -2.33
RPA3P35244 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.52□□□□□ -2.33
RPA3P35244 MTND1P22-201ENST00000510572 951 ntBASIC0.52□□□□□ -2.33
RPA3P35244 RNU6-1038P-201ENST00000516516 104 ntBASIC0.52□□□□□ -2.33
RPA3P35244 AC087854.1-201ENST00000519706 414 ntBASIC0.52□□□□□ -2.33
RPA3P35244 AC007834.2-201ENST00000536310 343 ntBASIC0.52□□□□□ -2.33
RPA3P35244 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.52□□□□□ -2.33
RPA3P35244 MIR4424-201ENST00000585257 86 ntBASIC0.52□□□□□ -2.33
RPA3P35244 AL357312.1-201ENST00000603879 298 ntBASIC0.52□□□□□ -2.33
RPA3P35244 SNORA2.2-201ENST00000365473 135 ntBASIC0.51□□□□□ -2.33
RPA3P35244 SNORD116-13-201ENST00000384408 92 ntBASIC0.51□□□□□ -2.33
RPA3P35244 MIR521-1-201ENST00000384902 87 ntBASIC0.51□□□□□ -2.33
RPA3P35244 MIR518E-201ENST00000385252 88 ntBASIC0.51□□□□□ -2.33
RPA3P35244 U8.16-201ENST00000391279 133 ntBASIC0.51□□□□□ -2.33
RPA3P35244 RNU6-325P-201ENST00000411132 105 ntBASIC0.51□□□□□ -2.33
RPA3P35244 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.51□□□□□ -2.33
RPA3P35244 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.51□□□□□ -2.33
RPA3P35244 TPTE2P5-203ENST00000458118 728 ntBASIC0.51□□□□□ -2.33
RPA3P35244 RNU7-90P-201ENST00000459216 62 ntBASIC0.51□□□□□ -2.33
RPA3P35244 RNU7-94P-201ENST00000459576 63 ntBASIC0.51□□□□□ -2.33
RPA3P35244 RPL23AP75-201ENST00000491601 451 ntBASIC0.51□□□□□ -2.33
RPA3P35244 RNU6-189P-201ENST00000516120 101 ntBASIC0.51□□□□□ -2.33
RPA3P35244 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.51□□□□□ -2.33
RPA3P35244 AC016957.1-201ENST00000534895 309 ntBASIC0.51□□□□□ -2.33
RPA3P35244 AK6P2-201ENST00000549020 471 ntBASIC0.51□□□□□ -2.33
RPA3P35244 SNORA4-201ENST00000584302 138 ntBASIC0.51□□□□□ -2.33
RPA3P35244 AC004223.2-201ENST00000590309 544 ntBASIC0.51□□□□□ -2.33
RPA3P35244 AL357078.3-201ENST00000607528 618 ntBASIC0.51□□□□□ -2.33
RPA3P35244 AL442644.1-201ENST00000454390 3105 ntBASIC0.5□□□□□ -2.33
RPA3P35244 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
RPA3P35244 RNU6-1335P-201ENST00000365426 107 ntBASIC0.5□□□□□ -2.33
RPA3P35244 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.5□□□□□ -2.33
RPA3P35244 RNU6-424P-201ENST00000384367 105 ntBASIC0.5□□□□□ -2.33
RPA3P35244 SNORA26.8-201ENST00000391306 124 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms