Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MIR122-201ENST00000385044 85 ntBASIC0.32□□□□□ -2.36
COL4A5P29400 MIR620-201ENST00000385232 95 ntBASIC0.32□□□□□ -2.36
COL4A5P29400 MTND3P17-201ENST00000416968 344 ntBASIC0.32□□□□□ -2.36
COL4A5P29400 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.32□□□□□ -2.36
COL4A5P29400 AC009237.7-201ENST00000447357 229 ntBASIC0.32□□□□□ -2.36
COL4A5P29400 RNU6-221P-201ENST00000459541 99 ntBASIC0.32□□□□□ -2.36
COL4A5P29400 AC007215.1-201ENST00000464893 276 ntBASIC0.32□□□□□ -2.36
COL4A5P29400 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.32□□□□□ -2.36
COL4A5P29400 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.32□□□□□ -2.36
COL4A5P29400 IGLVI-20-201ENST00000519296 130 ntBASIC0.32□□□□□ -2.36
COL4A5P29400 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.32□□□□□ -2.36
COL4A5P29400 AL391834.2-201ENST00000609982 546 ntBASIC0.32□□□□□ -2.36
COL4A5P29400 snoZ196.1-201ENST00000625269 89 ntBASIC0.32□□□□□ -2.36
COL4A5P29400 Y_RNA.124-201ENST00000363339 93 ntBASIC0.31□□□□□ -2.36
COL4A5P29400 SNORD95.1-201ENST00000364099 68 ntBASIC0.31□□□□□ -2.36
COL4A5P29400 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.31□□□□□ -2.36
COL4A5P29400 RNA5SP109-201ENST00000391010 116 ntBASIC0.31□□□□□ -2.36
COL4A5P29400 AL355796.1-201ENST00000406706 323 ntBASIC0.31□□□□□ -2.36
COL4A5P29400 RNA5SP266-201ENST00000410273 108 ntBASIC0.31□□□□□ -2.36
COL4A5P29400 RNA5SP494-201ENST00000410653 129 ntBASIC0.31□□□□□ -2.36
COL4A5P29400 RNU6-57P-201ENST00000411348 103 ntBASIC0.31□□□□□ -2.36
COL4A5P29400 AL008987.1-201ENST00000415528 237 ntBASIC0.31□□□□□ -2.36
COL4A5P29400 AC245047.3-201ENST00000429428 127 ntBASIC0.31□□□□□ -2.36
COL4A5P29400 AC092423.1-201ENST00000430165 186 ntBASIC0.31□□□□□ -2.36
COL4A5P29400 STAG3L5P-204ENST00000443759 179 ntBASIC0.31□□□□□ -2.36
COL4A5P29400 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
COL4A5P29400 RPS26P48-201ENST00000491713 339 ntBASIC0.31□□□□□ -2.36
COL4A5P29400 AC025465.4-201ENST00000513422 638 ntBASIC0.31□□□□□ -2.36
COL4A5P29400 RNU6-922P-201ENST00000516753 99 ntBASIC0.31□□□□□ -2.36
COL4A5P29400 AP002001.1-203ENST00000534002 267 ntBASIC0.31□□□□□ -2.36
COL4A5P29400 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.31□□□□□ -2.36
COL4A5P29400 MIR4305-201ENST00000583252 102 ntBASIC0.31□□□□□ -2.36
COL4A5P29400 AC064872.1-201ENST00000604823 1072 ntBASIC0.31□□□□□ -2.36
COL4A5P29400 PRELID3BP2-201ENST00000605362 201 ntBASIC0.31□□□□□ -2.36
COL4A5P29400 AC005562.2-201ENST00000618264 111 ntBASIC0.31□□□□□ -2.36
COL4A5P29400 RNU6-500P-201ENST00000362349 107 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 RNU6-227P-201ENST00000362865 103 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 SNORA2.2-201ENST00000365473 135 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 RNU6-1127P-201ENST00000384580 107 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 RNU6-541P-201ENST00000384709 110 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 SNORD99-201ENST00000408612 74 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 RNU2-29P-201ENST00000410423 189 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 RPS26P5-201ENST00000418544 335 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 AC104850.1-201ENST00000435940 476 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.3□□□□□ -2.36
COL4A5P29400 AL606517.2-201ENST00000442855 241 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 RPS27P22-201ENST00000478056 241 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 RNU7-99P-201ENST00000516271 62 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 RNU6-323P-201ENST00000521915 107 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.3□□□□□ -2.36
COL4A5P29400 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.3□□□□□ -2.36
COL4A5P29400 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.3□□□□□ -2.36
COL4A5P29400 AC025449.1-201ENST00000603896 529 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 AC108676.2-201ENST00000605225 163 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 AL078596.1-201ENST00000624856 447 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 OR5AK4P-201ENST00000635912 903 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
COL4A5P29400 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
COL4A5P29400 MRPL42P3-201ENST00000401492 326 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 RPS3AP3-201ENST00000411933 242 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 RPS3AP1-201ENST00000413190 320 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 AL117339.3-201ENST00000418733 162 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 AC008134.1-201ENST00000420943 193 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.3□□□□□ -2.36
COL4A5P29400 RPEP5-201ENST00000441137 268 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 UBE2D3P4-201ENST00000441973 436 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 AC093019.1-201ENST00000443135 252 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 MTND2P14-201ENST00000482139 351 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.3□□□□□ -2.36
COL4A5P29400 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
COL4A5P29400 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.3□□□□□ -2.36
COL4A5P29400 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.3□□□□□ -2.36
COL4A5P29400 AC245014.2-201ENST00000603689 287 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 AC246785.4-201ENST00000605374 287 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 RNU6-85P-201ENST00000605989 107 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 AL603839.4-201ENST00000624658 1005 ntBASIC0.3□□□□□ -2.36
COL4A5P29400 SNORA36A-201ENST00000384221 132 ntBASIC0.29□□□□□ -2.36
COL4A5P29400 SNORD116-13-201ENST00000384408 92 ntBASIC0.29□□□□□ -2.36
COL4A5P29400 RNU6-505P-201ENST00000384427 107 ntBASIC0.29□□□□□ -2.36
COL4A5P29400 RNU6-1237P-201ENST00000384777 107 ntBASIC0.29□□□□□ -2.36
COL4A5P29400 MIR562-201ENST00000384894 95 ntBASIC0.29□□□□□ -2.36
COL4A5P29400 SNORD89-201ENST00000390981 114 ntBASIC0.29□□□□□ -2.36
COL4A5P29400 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.29□□□□□ -2.36
COL4A5P29400 AL133217.1-201ENST00000450980 425 ntBASIC0.29□□□□□ -2.36
COL4A5P29400 MTCO3P8-201ENST00000453691 755 ntBASIC0.29□□□□□ -2.36
COL4A5P29400 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.29□□□□□ -2.36
COL4A5P29400 RNU7-138P-201ENST00000459479 64 ntBASIC0.29□□□□□ -2.36
COL4A5P29400 MTCO2P6-201ENST00000463134 685 ntBASIC0.29□□□□□ -2.36
COL4A5P29400 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.29□□□□□ -2.36
COL4A5P29400 RNU7-12P-201ENST00000516030 62 ntBASIC0.29□□□□□ -2.36
COL4A5P29400 RNU6-344P-201ENST00000516635 111 ntBASIC0.29□□□□□ -2.36
COL4A5P29400 AC025647.1-201ENST00000517879 253 ntBASIC0.29□□□□□ -2.36
COL4A5P29400 BNIP3P39-201ENST00000601077 554 ntBASIC0.29□□□□□ -2.36
COL4A5P29400 AC022217.4-201ENST00000604389 163 ntBASIC0.29□□□□□ -2.36
COL4A5P29400 MTRNR2L2-201ENST00000604882 87 ntBASIC0.29□□□□□ -2.36
COL4A5P29400 AC023934.1-201ENST00000574529 2389 ntBASIC0.28□□□□□ -2.36
COL4A5P29400 RNU6-74P-201ENST00000384235 107 ntBASIC0.28□□□□□ -2.36
COL4A5P29400 RNU6-517P-201ENST00000384362 110 ntBASIC0.28□□□□□ -2.36
COL4A5P29400 RNU6-1067P-201ENST00000384752 107 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms