Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 UBL5P4-201ENST00000562584 236 ntBASIC1.61□□□□□ -2.15
RPA1P27694 MIR5094-201ENST00000578766 85 ntBASIC1.61□□□□□ -2.15
RPA1P27694 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.61□□□□□ -2.15
RPA1P27694 FGF7P1-201ENST00000582820 288 ntBASIC1.61□□□□□ -2.15
RPA1P27694 AL132765.2-201ENST00000610812 351 ntBASIC1.61□□□□□ -2.15
RPA1P27694 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.61□□□□□ -2.15
RPA1P27694 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.61□□□□□ -2.15
RPA1P27694 AC104260.1-201ENST00000616660 539 ntBASIC1.61□□□□□ -2.15
RPA1P27694 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.61□□□□□ -2.15
RPA1P27694 MTND4LP32-201ENST00000636111 270 ntBASIC1.61□□□□□ -2.15
RPA1P27694 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.61□□□□□ -2.15
RPA1P27694 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.61□□□□□ -2.15
RPA1P27694 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
RPA1P27694 Y_RNA.58-201ENST00000362807 102 ntBASIC1.6□□□□□ -2.15
RPA1P27694 Y_RNA.154-201ENST00000363624 102 ntBASIC1.6□□□□□ -2.15
RPA1P27694 RNU6-1019P-201ENST00000364424 107 ntBASIC1.6□□□□□ -2.15
RPA1P27694 RNY3P1-201ENST00000365085 102 ntBASIC1.6□□□□□ -2.15
RPA1P27694 RNY3-201ENST00000365484 102 ntBASIC1.6□□□□□ -2.15
RPA1P27694 SNORA18.2-201ENST00000383865 132 ntBASIC1.6□□□□□ -2.15
RPA1P27694 Y_RNA.490-201ENST00000384413 102 ntBASIC1.6□□□□□ -2.15
RPA1P27694 RNU6-601P-201ENST00000384540 107 ntBASIC1.6□□□□□ -2.15
RPA1P27694 RNU6-296P-201ENST00000384608 107 ntBASIC1.6□□□□□ -2.15
RPA1P27694 RNU6-997P-201ENST00000384725 107 ntBASIC1.6□□□□□ -2.15
RPA1P27694 RNU4-62P-201ENST00000410125 130 ntBASIC1.6□□□□□ -2.15
RPA1P27694 RNU6-1050P-201ENST00000410388 107 ntBASIC1.6□□□□□ -2.15
RPA1P27694 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.6□□□□□ -2.15
RPA1P27694 AL353572.1-201ENST00000442490 417 ntBASIC1.6□□□□□ -2.15
RPA1P27694 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.6□□□□□ -2.15
RPA1P27694 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.6□□□□□ -2.15
RPA1P27694 U8.22-201ENST00000459141 133 ntBASIC1.6□□□□□ -2.15
RPA1P27694 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.6□□□□□ -2.15
RPA1P27694 RNA5SP481-201ENST00000516814 122 ntBASIC1.6□□□□□ -2.15
RPA1P27694 RNU6-222P-201ENST00000362438 107 ntBASIC1.59□□□□□ -2.15
RPA1P27694 Y_RNA.67-201ENST00000362870 100 ntBASIC1.59□□□□□ -2.15
RPA1P27694 Y_RNA.142-201ENST00000363491 102 ntBASIC1.59□□□□□ -2.15
RPA1P27694 RNU6-1013P-201ENST00000384180 107 ntBASIC1.59□□□□□ -2.15
RPA1P27694 RNU6-439P-201ENST00000384188 106 ntBASIC1.59□□□□□ -2.15
RPA1P27694 RNU6-933P-201ENST00000384424 107 ntBASIC1.59□□□□□ -2.15
RPA1P27694 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
RPA1P27694 RNA5SP494-201ENST00000410653 129 ntBASIC1.59□□□□□ -2.15
RPA1P27694 Y_RNA.646-201ENST00000410980 101 ntBASIC1.59□□□□□ -2.15
RPA1P27694 RNU6-370P-201ENST00000411008 104 ntBASIC1.59□□□□□ -2.15
RPA1P27694 AC074085.1-201ENST00000413598 418 ntBASIC1.59□□□□□ -2.15
RPA1P27694 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.59□□□□□ -2.15
RPA1P27694 AL353997.1-201ENST00000432936 108 ntBASIC1.59□□□□□ -2.15
RPA1P27694 MTCO3P8-201ENST00000453691 755 ntBASIC1.59□□□□□ -2.15
RPA1P27694 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.59□□□□□ -2.15
RPA1P27694 SCARNA16.2-201ENST00000516520 172 ntBASIC1.59□□□□□ -2.15
RPA1P27694 RNU6-1016P-201ENST00000516689 94 ntBASIC1.59□□□□□ -2.15
RPA1P27694 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.59□□□□□ -2.15
RPA1P27694 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.59□□□□□ -2.15
RPA1P27694 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.59□□□□□ -2.15
RPA1P27694 AC083806.3-201ENST00000614016 455 ntBASIC1.59□□□□□ -2.15
RPA1P27694 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
RPA1P27694 AC010615.1-201ENST00000594254 1764 ntBASIC1.58□□□□□ -2.16
RPA1P27694 SNORD33-201ENST00000362761 85 ntBASIC1.58□□□□□ -2.16
RPA1P27694 MIR32-201ENST00000384965 70 ntBASIC1.58□□□□□ -2.16
RPA1P27694 MIR1267-201ENST00000408723 78 ntBASIC1.58□□□□□ -2.16
RPA1P27694 RPL37P10-201ENST00000412884 288 ntBASIC1.58□□□□□ -2.16
RPA1P27694 MTND4P18-201ENST00000447010 465 ntBASIC1.58□□□□□ -2.16
RPA1P27694 AC245517.4-201ENST00000448601 281 ntBASIC1.58□□□□□ -2.16
RPA1P27694 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.58□□□□□ -2.16
RPA1P27694 RNU6-856P-201ENST00000516959 98 ntBASIC1.58□□□□□ -2.16
RPA1P27694 AC027288.2-201ENST00000553028 243 ntBASIC1.58□□□□□ -2.16
RPA1P27694 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.58□□□□□ -2.16
RPA1P27694 UBE2V2P2-201ENST00000587677 504 ntBASIC1.58□□□□□ -2.16
RPA1P27694 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
RPA1P27694 AP000942.3-201ENST00000603702 160 ntBASIC1.58□□□□□ -2.16
RPA1P27694 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.58□□□□□ -2.16
RPA1P27694 AC137590.2-201ENST00000619709 240 ntBASIC1.58□□□□□ -2.16
RPA1P27694 AL669831.3-213ENST00000636676 183 ntBASIC1.58□□□□□ -2.16
RPA1P27694 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
RPA1P27694 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.58□□□□□ -2.16
RPA1P27694 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.58□□□□□ -2.16
RPA1P27694 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
RPA1P27694 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.57□□□□□ -2.16
RPA1P27694 Y_RNA.2-201ENST00000362330 96 ntBASIC1.57□□□□□ -2.16
RPA1P27694 RNU6-545P-201ENST00000362681 104 ntBASIC1.57□□□□□ -2.16
RPA1P27694 RNY3P11-201ENST00000364153 102 ntBASIC1.57□□□□□ -2.16
RPA1P27694 Y_RNA.405-201ENST00000383979 100 ntBASIC1.57□□□□□ -2.16
RPA1P27694 Y_RNA.451-201ENST00000384200 100 ntBASIC1.57□□□□□ -2.16
RPA1P27694 Y_RNA.524-201ENST00000384564 100 ntBASIC1.57□□□□□ -2.16
RPA1P27694 RNU6-310P-201ENST00000384655 107 ntBASIC1.57□□□□□ -2.16
RPA1P27694 Y_RNA.561-201ENST00000384694 100 ntBASIC1.57□□□□□ -2.16
RPA1P27694 SNORA75.4-201ENST00000391278 119 ntBASIC1.57□□□□□ -2.16
RPA1P27694 RNA5SP504-201ENST00000410676 117 ntBASIC1.57□□□□□ -2.16
RPA1P27694 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.57□□□□□ -2.16
RPA1P27694 JTBP1-201ENST00000441314 247 ntBASIC1.57□□□□□ -2.16
RPA1P27694 DAP3P1-201ENST00000441522 278 ntBASIC1.57□□□□□ -2.16
RPA1P27694 SNRPGP13-201ENST00000442212 177 ntBASIC1.57□□□□□ -2.16
RPA1P27694 AC107399.1-201ENST00000451226 265 ntBASIC1.57□□□□□ -2.16
RPA1P27694 AC010531.2-201ENST00000465012 153 ntBASIC1.57□□□□□ -2.16
RPA1P27694 AC114982.1-201ENST00000469402 321 ntBASIC1.57□□□□□ -2.16
RPA1P27694 RPL26P26-201ENST00000480251 434 ntBASIC1.57□□□□□ -2.16
RPA1P27694 RNU6-237P-201ENST00000515985 71 ntBASIC1.57□□□□□ -2.16
RPA1P27694 RNU6-970P-201ENST00000516312 107 ntBASIC1.57□□□□□ -2.16
RPA1P27694 RNU1-54P-201ENST00000517181 120 ntBASIC1.57□□□□□ -2.16
RPA1P27694 AK6P2-201ENST00000549020 471 ntBASIC1.57□□□□□ -2.16
RPA1P27694 FRG2DP-202ENST00000566967 323 ntBASIC1.57□□□□□ -2.16
RPA1P27694 AL355802.3-201ENST00000607571 545 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms