Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC024614.2-201ENST00000577584 372 ntBASIC1.73□□□□□ -2.13
BDNFP23560 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.73□□□□□ -2.13
BDNFP23560 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.73□□□□□ -2.13
BDNFP23560 AL078604.3-201ENST00000615580 211 ntBASIC1.73□□□□□ -2.13
BDNFP23560 AC095038.3-201ENST00000634439 195 ntBASIC1.73□□□□□ -2.13
BDNFP23560 SNORD26-201ENST00000384147 75 ntBASIC1.72□□□□□ -2.13
BDNFP23560 RNA5SP467-201ENST00000391274 118 ntBASIC1.72□□□□□ -2.13
BDNFP23560 AL513185.2-201ENST00000425543 193 ntBASIC1.72□□□□□ -2.13
BDNFP23560 AC108667.1-201ENST00000428618 249 ntBASIC1.72□□□□□ -2.13
BDNFP23560 AL135790.2-201ENST00000437701 267 ntBASIC1.72□□□□□ -2.13
BDNFP23560 EIF1P4-201ENST00000572664 335 ntBASIC1.72□□□□□ -2.13
BDNFP23560 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.72□□□□□ -2.13
BDNFP23560 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.72□□□□□ -2.13
BDNFP23560 ZNF299P-201ENST00000406845 1804 ntBASIC1.72□□□□□ -2.13
BDNFP23560 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.71□□□□□ -2.14
BDNFP23560 Y_RNA.41-201ENST00000362646 102 ntBASIC1.71□□□□□ -2.14
BDNFP23560 RNU6-203P-201ENST00000384038 104 ntBASIC1.71□□□□□ -2.14
BDNFP23560 MIR487A-201ENST00000385009 80 ntBASIC1.71□□□□□ -2.14
BDNFP23560 RPL30P13-201ENST00000418873 348 ntBASIC1.71□□□□□ -2.14
BDNFP23560 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.71□□□□□ -2.14
BDNFP23560 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.71□□□□□ -2.14
BDNFP23560 AC093303.1-201ENST00000514549 295 ntBASIC1.71□□□□□ -2.14
BDNFP23560 RNA5SP458-201ENST00000516188 119 ntBASIC1.71□□□□□ -2.14
BDNFP23560 RNU6-1314P-201ENST00000517139 104 ntBASIC1.71□□□□□ -2.14
BDNFP23560 RNA5SP454-201ENST00000517231 127 ntBASIC1.71□□□□□ -2.14
BDNFP23560 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.71□□□□□ -2.14
BDNFP23560 SUB1P3-201ENST00000564581 315 ntBASIC1.71□□□□□ -2.14
BDNFP23560 AC004584.2-201ENST00000570407 410 ntBASIC1.71□□□□□ -2.14
BDNFP23560 MIR4303-201ENST00000581299 66 ntBASIC1.71□□□□□ -2.14
BDNFP23560 AL162424.1-201ENST00000602325 221 ntBASIC1.71□□□□□ -2.14
BDNFP23560 AP000942.3-201ENST00000603702 160 ntBASIC1.71□□□□□ -2.14
BDNFP23560 BNIP3P10-201ENST00000605360 577 ntBASIC1.71□□□□□ -2.14
BDNFP23560 AC006435.5-201ENST00000624486 112 ntBASIC1.71□□□□□ -2.14
BDNFP23560 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.71□□□□□ -2.14
BDNFP23560 MTND4P12-201ENST00000498999 1377 ntBASIC1.71□□□□□ -2.14
BDNFP23560 RNU4-75P-201ENST00000364621 146 ntBASIC1.7□□□□□ -2.14
BDNFP23560 Y_RNA.450-201ENST00000384198 113 ntBASIC1.7□□□□□ -2.14
BDNFP23560 RPL21P1-201ENST00000399532 476 ntBASIC1.7□□□□□ -2.14
BDNFP23560 RNA5SP504-201ENST00000410676 117 ntBASIC1.7□□□□□ -2.14
BDNFP23560 RN7SKP101-201ENST00000411376 320 ntBASIC1.7□□□□□ -2.14
BDNFP23560 AC016909.1-201ENST00000415916 166 ntBASIC1.7□□□□□ -2.14
BDNFP23560 AC243428.1-201ENST00000421099 264 ntBASIC1.7□□□□□ -2.14
BDNFP23560 RPS27P16-201ENST00000425758 201 ntBASIC1.7□□□□□ -2.14
BDNFP23560 AL603825.1-201ENST00000438481 80 ntBASIC1.7□□□□□ -2.14
BDNFP23560 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.7□□□□□ -2.14
BDNFP23560 PGBD4P5-201ENST00000445958 426 ntBASIC1.7□□□□□ -2.14
BDNFP23560 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.7□□□□□ -2.14
BDNFP23560 Y_RNA.706-201ENST00000516933 99 ntBASIC1.7□□□□□ -2.14
BDNFP23560 CYCSP23-201ENST00000519781 313 ntBASIC1.7□□□□□ -2.14
BDNFP23560 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.7□□□□□ -2.14
BDNFP23560 MIR3684-201ENST00000579779 74 ntBASIC1.7□□□□□ -2.14
BDNFP23560 AC100812.1-201ENST00000607622 580 ntBASIC1.7□□□□□ -2.14
BDNFP23560 AC009248.2-201ENST00000619826 254 ntBASIC1.7□□□□□ -2.14
BDNFP23560 AC090617.10-201ENST00000624308 134 ntBASIC1.7□□□□□ -2.14
BDNFP23560 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.7□□□□□ -2.14
BDNFP23560 Y_RNA.89-201ENST00000363031 102 ntBASIC1.69□□□□□ -2.14
BDNFP23560 RNU4-12P-201ENST00000365233 139 ntBASIC1.69□□□□□ -2.14
BDNFP23560 SNORA4.2-201ENST00000365313 147 ntBASIC1.69□□□□□ -2.14
BDNFP23560 RNA5SP259-201ENST00000365541 109 ntBASIC1.69□□□□□ -2.14
BDNFP23560 RPL30P16-201ENST00000419341 429 ntBASIC1.69□□□□□ -2.14
BDNFP23560 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.69□□□□□ -2.14
BDNFP23560 RPL30P10-201ENST00000488148 337 ntBASIC1.69□□□□□ -2.14
BDNFP23560 RNU6-720P-201ENST00000516363 108 ntBASIC1.69□□□□□ -2.14
BDNFP23560 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.69□□□□□ -2.14
BDNFP23560 AC010999.1-201ENST00000611856 324 ntBASIC1.69□□□□□ -2.14
BDNFP23560 SNORA33-201ENST00000363664 130 ntBASIC1.68□□□□□ -2.14
BDNFP23560 Y_RNA.184-201ENST00000363884 108 ntBASIC1.68□□□□□ -2.14
BDNFP23560 RNA5SP363-201ENST00000365072 115 ntBASIC1.68□□□□□ -2.14
BDNFP23560 SNORA67.5-201ENST00000391036 107 ntBASIC1.68□□□□□ -2.14
BDNFP23560 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.68□□□□□ -2.14
BDNFP23560 RNU7-99P-201ENST00000516271 62 ntBASIC1.68□□□□□ -2.14
BDNFP23560 MIR8065-201ENST00000620577 100 ntBASIC1.68□□□□□ -2.14
BDNFP23560 AC100810.6-201ENST00000638068 285 ntBASIC1.68□□□□□ -2.14
BDNFP23560 SNORA25.8-201ENST00000364831 128 ntBASIC1.67□□□□□ -2.14
BDNFP23560 Y_RNA.295-201ENST00000364918 102 ntBASIC1.67□□□□□ -2.14
BDNFP23560 RNA5SP109-201ENST00000391010 116 ntBASIC1.67□□□□□ -2.14
BDNFP23560 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
BDNFP23560 AL034345.1-201ENST00000407768 123 ntBASIC1.67□□□□□ -2.14
BDNFP23560 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.67□□□□□ -2.14
BDNFP23560 RNU6-1186P-201ENST00000410429 97 ntBASIC1.67□□□□□ -2.14
BDNFP23560 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.67□□□□□ -2.14
BDNFP23560 TOMM22P2-201ENST00000430735 237 ntBASIC1.67□□□□□ -2.14
BDNFP23560 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.67□□□□□ -2.14
BDNFP23560 SNORD53B-201ENST00000577887 78 ntBASIC1.67□□□□□ -2.14
BDNFP23560 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.67□□□□□ -2.14
BDNFP23560 U6.73-201ENST00000619194 103 ntBASIC1.67□□□□□ -2.14
BDNFP23560 MIR3662-201ENST00000637030 95 ntBASIC1.67□□□□□ -2.14
BDNFP23560 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.67□□□□□ -2.14
BDNFP23560 RNU6-727P-201ENST00000363592 107 ntBASIC1.66□□□□□ -2.14
BDNFP23560 SNORD87-201ENST00000364849 89 ntBASIC1.66□□□□□ -2.14
BDNFP23560 Y_RNA.415-201ENST00000384012 112 ntBASIC1.66□□□□□ -2.14
BDNFP23560 Y_RNA.453-201ENST00000384223 109 ntBASIC1.66□□□□□ -2.14
BDNFP23560 RNU6-306P-201ENST00000384617 107 ntBASIC1.66□□□□□ -2.14
BDNFP23560 RNU6-1031P-201ENST00000384773 107 ntBASIC1.66□□□□□ -2.14
BDNFP23560 MRPL42P3-201ENST00000401492 326 ntBASIC1.66□□□□□ -2.14
BDNFP23560 RNU4-62P-201ENST00000410125 130 ntBASIC1.66□□□□□ -2.14
BDNFP23560 RNU6-174P-201ENST00000410406 106 ntBASIC1.66□□□□□ -2.14
BDNFP23560 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.66□□□□□ -2.14
BDNFP23560 AC245047.3-201ENST00000429428 127 ntBASIC1.66□□□□□ -2.14
BDNFP23560 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms