Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 HMGN1P12-201ENST00000499125 195 ntBASIC1.68□□□□□ -2.14
KRT3P12035 AC011406.1-201ENST00000512440 370 ntBASIC1.68□□□□□ -2.14
KRT3P12035 AC093303.1-201ENST00000514549 295 ntBASIC1.68□□□□□ -2.14
KRT3P12035 RNU6-344P-201ENST00000516635 111 ntBASIC1.68□□□□□ -2.14
KRT3P12035 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.68□□□□□ -2.14
KRT3P12035 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.68□□□□□ -2.14
KRT3P12035 MZT1P2-201ENST00000604387 248 ntBASIC1.68□□□□□ -2.14
KRT3P12035 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.68□□□□□ -2.14
KRT3P12035 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.68□□□□□ -2.14
KRT3P12035 MIR1244-1-201ENST00000612829 85 ntBASIC1.68□□□□□ -2.14
KRT3P12035 AC022306.2-201ENST00000617563 647 ntBASIC1.68□□□□□ -2.14
KRT3P12035 MIR1244-3-201ENST00000635744 85 ntBASIC1.68□□□□□ -2.14
KRT3P12035 MIR1244-2-201ENST00000636449 85 ntBASIC1.68□□□□□ -2.14
KRT3P12035 AL669831.3-213ENST00000636676 183 ntBASIC1.68□□□□□ -2.14
KRT3P12035 MIR1244-4-202ENST00000636813 85 ntBASIC1.68□□□□□ -2.14
KRT3P12035 SNORD115-8-201ENST00000363856 82 ntBASIC1.67□□□□□ -2.14
KRT3P12035 RNU6-879P-201ENST00000364328 108 ntBASIC1.67□□□□□ -2.14
KRT3P12035 SNORD115-38-201ENST00000365037 82 ntBASIC1.67□□□□□ -2.14
KRT3P12035 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.67□□□□□ -2.14
KRT3P12035 MIR586-201ENST00000385035 97 ntBASIC1.67□□□□□ -2.14
KRT3P12035 AC091179.3-201ENST00000474761 144 ntBASIC1.67□□□□□ -2.14
KRT3P12035 AC067942.3-201ENST00000512025 362 ntBASIC1.67□□□□□ -2.14
KRT3P12035 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.67□□□□□ -2.14
KRT3P12035 RNU6-307P-201ENST00000516743 106 ntBASIC1.67□□□□□ -2.14
KRT3P12035 SNORA20.3-201ENST00000516880 132 ntBASIC1.67□□□□□ -2.14
KRT3P12035 RNU6-264P-201ENST00000517134 104 ntBASIC1.67□□□□□ -2.14
KRT3P12035 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.67□□□□□ -2.14
KRT3P12035 AC093023.1-201ENST00000547375 507 ntBASIC1.67□□□□□ -2.14
KRT3P12035 AC010999.1-201ENST00000611856 324 ntBASIC1.67□□□□□ -2.14
KRT3P12035 AC092794.2-201ENST00000620933 563 ntBASIC1.67□□□□□ -2.14
KRT3P12035 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.67□□□□□ -2.14
KRT3P12035 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRT3P12035 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
KRT3P12035 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
KRT3P12035 RNU1-62P-201ENST00000362599 164 ntBASIC1.66□□□□□ -2.14
KRT3P12035 Y_RNA.142-201ENST00000363491 102 ntBASIC1.66□□□□□ -2.14
KRT3P12035 RNU5F-3P-201ENST00000363767 117 ntBASIC1.66□□□□□ -2.14
KRT3P12035 RNA5SP363-201ENST00000365072 115 ntBASIC1.66□□□□□ -2.14
KRT3P12035 Y_RNA.358-201ENST00000365491 99 ntBASIC1.66□□□□□ -2.14
KRT3P12035 RNU6-1235P-201ENST00000384559 107 ntBASIC1.66□□□□□ -2.14
KRT3P12035 RNU6-417P-201ENST00000384712 107 ntBASIC1.66□□□□□ -2.14
KRT3P12035 RNU6-997P-201ENST00000384725 107 ntBASIC1.66□□□□□ -2.14
KRT3P12035 MIR10B-201ENST00000385011 110 ntBASIC1.66□□□□□ -2.14
KRT3P12035 MIR548B-201ENST00000385247 97 ntBASIC1.66□□□□□ -2.14
KRT3P12035 MIR934-201ENST00000401241 83 ntBASIC1.66□□□□□ -2.14
KRT3P12035 SNORA11.2-201ENST00000408318 127 ntBASIC1.66□□□□□ -2.14
KRT3P12035 MTCYBP10-201ENST00000424905 650 ntBASIC1.66□□□□□ -2.14
KRT3P12035 RNU6-498P-201ENST00000459468 107 ntBASIC1.66□□□□□ -2.14
KRT3P12035 RNU6-120P-201ENST00000516077 103 ntBASIC1.66□□□□□ -2.14
KRT3P12035 RNU6-559P-201ENST00000516151 98 ntBASIC1.66□□□□□ -2.14
KRT3P12035 RNU2-34P-201ENST00000516534 121 ntBASIC1.66□□□□□ -2.14
KRT3P12035 RNU6-856P-201ENST00000516959 98 ntBASIC1.66□□□□□ -2.14
KRT3P12035 AC022868.1-201ENST00000517767 391 ntBASIC1.66□□□□□ -2.14
KRT3P12035 AC027419.1-201ENST00000522976 328 ntBASIC1.66□□□□□ -2.14
KRT3P12035 MIR3198-2-201ENST00000577868 80 ntBASIC1.66□□□□□ -2.14
KRT3P12035 MIR5690-201ENST00000583739 73 ntBASIC1.66□□□□□ -2.14
KRT3P12035 AC005899.2-201ENST00000584353 90 ntBASIC1.66□□□□□ -2.14
KRT3P12035 RBM11P1-201ENST00000604951 799 ntBASIC1.66□□□□□ -2.14
KRT3P12035 AC016925.2-201ENST00000605108 242 ntBASIC1.66□□□□□ -2.14
KRT3P12035 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.66□□□□□ -2.14
KRT3P12035 AL355073.2-201ENST00000612106 557 ntBASIC1.66□□□□□ -2.14
KRT3P12035 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.66□□□□□ -2.14
KRT3P12035 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.66□□□□□ -2.14
KRT3P12035 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.66□□□□□ -2.14
KRT3P12035 AC022513.1-201ENST00000624512 117 ntBASIC1.66□□□□□ -2.14
KRT3P12035 snoZ196.1-201ENST00000625269 89 ntBASIC1.66□□□□□ -2.14
KRT3P12035 AC068205.3-201ENST00000636385 468 ntBASIC1.66□□□□□ -2.14
KRT3P12035 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.66□□□□□ -2.14
KRT3P12035 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
KRT3P12035 SNORA72.1-201ENST00000363485 129 ntBASIC1.65□□□□□ -2.15
KRT3P12035 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.65□□□□□ -2.15
KRT3P12035 RNA5SP323-201ENST00000391094 133 ntBASIC1.65□□□□□ -2.15
KRT3P12035 RNU1-98P-201ENST00000458992 160 ntBASIC1.65□□□□□ -2.15
KRT3P12035 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.65□□□□□ -2.15
KRT3P12035 HMGN1P13-201ENST00000505795 138 ntBASIC1.65□□□□□ -2.15
KRT3P12035 RNU6-970P-201ENST00000516312 107 ntBASIC1.65□□□□□ -2.15
KRT3P12035 AL121579.1-201ENST00000555129 305 ntBASIC1.65□□□□□ -2.15
KRT3P12035 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.65□□□□□ -2.15
KRT3P12035 AC069114.2-201ENST00000604699 304 ntBASIC1.65□□□□□ -2.15
KRT3P12035 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRT3P12035 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRT3P12035 MTND5P35-201ENST00000557537 1720 ntBASIC1.64□□□□□ -2.15
KRT3P12035 RNU6-137P-201ENST00000363680 108 ntBASIC1.64□□□□□ -2.15
KRT3P12035 Y_RNA.166-201ENST00000363730 102 ntBASIC1.64□□□□□ -2.15
KRT3P12035 RNU6-99P-201ENST00000364721 107 ntBASIC1.64□□□□□ -2.15
KRT3P12035 RNA5SP190-201ENST00000365222 118 ntBASIC1.64□□□□□ -2.15
KRT3P12035 RNA5SP100-201ENST00000410903 110 ntBASIC1.64□□□□□ -2.15
KRT3P12035 RNA5SP59-201ENST00000410922 110 ntBASIC1.64□□□□□ -2.15
KRT3P12035 AC009310.1-201ENST00000414414 451 ntBASIC1.64□□□□□ -2.15
KRT3P12035 AC099677.2-201ENST00000436385 175 ntBASIC1.64□□□□□ -2.15
KRT3P12035 HMGN2P23-201ENST00000456759 269 ntBASIC1.64□□□□□ -2.15
KRT3P12035 MIR2053-201ENST00000459295 91 ntBASIC1.64□□□□□ -2.15
KRT3P12035 AC010409.1-201ENST00000487382 476 ntBASIC1.64□□□□□ -2.15
KRT3P12035 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.64□□□□□ -2.15
KRT3P12035 RNU6-1114P-201ENST00000516022 107 ntBASIC1.64□□□□□ -2.15
KRT3P12035 SNORA31.17-201ENST00000516953 127 ntBASIC1.64□□□□□ -2.15
KRT3P12035 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.64□□□□□ -2.15
KRT3P12035 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.64□□□□□ -2.15
KRT3P12035 AC004584.2-201ENST00000570407 410 ntBASIC1.64□□□□□ -2.15
KRT3P12035 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms