Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RNU6-451P-201ENST00000362921 107 ntBASIC0.9□□□□□ -2.27
CD28P10747 Y_RNA.796-201ENST00000364268 102 ntBASIC0.9□□□□□ -2.27
CD28P10747 RNU4-9P-201ENST00000364951 139 ntBASIC0.9□□□□□ -2.27
CD28P10747 Y_RNA.799-201ENST00000364992 102 ntBASIC0.9□□□□□ -2.27
CD28P10747 Y_RNA.372-201ENST00000365599 102 ntBASIC0.9□□□□□ -2.27
CD28P10747 RNY1P14-201ENST00000384426 108 ntBASIC0.9□□□□□ -2.27
CD28P10747 RNU6-95P-201ENST00000384697 107 ntBASIC0.9□□□□□ -2.27
CD28P10747 RNU6-780P-201ENST00000391030 104 ntBASIC0.9□□□□□ -2.27
CD28P10747 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CD28P10747 COX6CP10-201ENST00000416832 224 ntBASIC0.9□□□□□ -2.27
CD28P10747 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.9□□□□□ -2.27
CD28P10747 AC008134.1-201ENST00000420943 193 ntBASIC0.9□□□□□ -2.27
CD28P10747 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.9□□□□□ -2.27
CD28P10747 snoU13.18-201ENST00000459483 104 ntBASIC0.9□□□□□ -2.27
CD28P10747 RPL31P58-201ENST00000469001 379 ntBASIC0.9□□□□□ -2.27
CD28P10747 AC087343.1-201ENST00000477341 475 ntBASIC0.9□□□□□ -2.27
CD28P10747 MTCO2P30-201ENST00000503662 364 ntBASIC0.9□□□□□ -2.27
CD28P10747 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.9□□□□□ -2.27
CD28P10747 AC090821.2-201ENST00000523552 176 ntBASIC0.9□□□□□ -2.27
CD28P10747 AC011604.1-201ENST00000545978 196 ntBASIC0.9□□□□□ -2.27
CD28P10747 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.9□□□□□ -2.27
CD28P10747 AC010525.2-201ENST00000590920 195 ntBASIC0.9□□□□□ -2.27
CD28P10747 SNORD11B-201ENST00000607707 90 ntBASIC0.9□□□□□ -2.27
CD28P10747 AL138726.1-201ENST00000614873 333 ntBASIC0.9□□□□□ -2.27
CD28P10747 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.9□□□□□ -2.27
CD28P10747 MIR6734-201ENST00000621166 68 ntBASIC0.9□□□□□ -2.27
CD28P10747 AL078596.1-201ENST00000624856 447 ntBASIC0.9□□□□□ -2.27
CD28P10747 AC245060.5-201ENST00000610778 3293 ntBASIC0.9□□□□□ -2.27
CD28P10747 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.89□□□□□ -2.27
CD28P10747 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
CD28P10747 RNY3P3-201ENST00000363816 102 ntBASIC0.89□□□□□ -2.27
CD28P10747 Y_RNA.530-201ENST00000384587 101 ntBASIC0.89□□□□□ -2.27
CD28P10747 RNU6-417P-201ENST00000384712 107 ntBASIC0.89□□□□□ -2.27
CD28P10747 MIR489-201ENST00000384923 84 ntBASIC0.89□□□□□ -2.27
CD28P10747 MIR1285-1-201ENST00000408593 84 ntBASIC0.89□□□□□ -2.27
CD28P10747 RNU6-57P-201ENST00000411348 103 ntBASIC0.89□□□□□ -2.27
CD28P10747 ZNF885P-201ENST00000420174 1098 ntBASIC0.89□□□□□ -2.27
CD28P10747 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.89□□□□□ -2.27
CD28P10747 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.89□□□□□ -2.27
CD28P10747 MTND3P21-201ENST00000433774 331 ntBASIC0.89□□□□□ -2.27
CD28P10747 MTCO3P18-201ENST00000440206 761 ntBASIC0.89□□□□□ -2.27
CD28P10747 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.89□□□□□ -2.27
CD28P10747 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.89□□□□□ -2.27
CD28P10747 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.89□□□□□ -2.27
CD28P10747 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.89□□□□□ -2.27
CD28P10747 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.89□□□□□ -2.27
CD28P10747 AL163195.1-201ENST00000496941 348 ntBASIC0.89□□□□□ -2.27
CD28P10747 HMGN1P12-201ENST00000499125 195 ntBASIC0.89□□□□□ -2.27
CD28P10747 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.89□□□□□ -2.27
CD28P10747 RNU6-1281P-201ENST00000516223 105 ntBASIC0.89□□□□□ -2.27
CD28P10747 RNU7-128P-201ENST00000517247 62 ntBASIC0.89□□□□□ -2.27
CD28P10747 AC019176.1-201ENST00000518519 225 ntBASIC0.89□□□□□ -2.27
CD28P10747 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.89□□□□□ -2.27
CD28P10747 AK6P2-201ENST00000549020 471 ntBASIC0.89□□□□□ -2.27
CD28P10747 AC027288.2-201ENST00000553028 243 ntBASIC0.89□□□□□ -2.27
CD28P10747 TPRKBP2-201ENST00000565969 475 ntBASIC0.89□□□□□ -2.27
CD28P10747 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.89□□□□□ -2.27
CD28P10747 MIR3937-201ENST00000580135 106 ntBASIC0.89□□□□□ -2.27
CD28P10747 AL390123.1-201ENST00000603216 237 ntBASIC0.89□□□□□ -2.27
CD28P10747 AC006001.4-201ENST00000622243 395 ntBASIC0.89□□□□□ -2.27
CD28P10747 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
CD28P10747 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.88□□□□□ -2.27
CD28P10747 U3.8-201ENST00000363675 217 ntBASIC0.88□□□□□ -2.27
CD28P10747 Y_RNA.212-201ENST00000364177 102 ntBASIC0.88□□□□□ -2.27
CD28P10747 RNU1-93P-201ENST00000364704 169 ntBASIC0.88□□□□□ -2.27
CD28P10747 RNU6-1240P-201ENST00000365155 104 ntBASIC0.88□□□□□ -2.27
CD28P10747 RNU6-483P-201ENST00000384088 108 ntBASIC0.88□□□□□ -2.27
CD28P10747 RNU6-42P-201ENST00000384165 107 ntBASIC0.88□□□□□ -2.27
CD28P10747 RNU6-1065P-201ENST00000384513 106 ntBASIC0.88□□□□□ -2.27
CD28P10747 RNU6-939P-201ENST00000384634 107 ntBASIC0.88□□□□□ -2.27
CD28P10747 RNU6-950P-201ENST00000384651 107 ntBASIC0.88□□□□□ -2.27
CD28P10747 MIR520E-201ENST00000384867 87 ntBASIC0.88□□□□□ -2.27
CD28P10747 MIR513A1-201ENST00000385138 129 ntBASIC0.88□□□□□ -2.27
CD28P10747 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
CD28P10747 RNA5SP467-201ENST00000391274 118 ntBASIC0.88□□□□□ -2.27
CD28P10747 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.88□□□□□ -2.27
CD28P10747 AL353572.1-201ENST00000442490 417 ntBASIC0.88□□□□□ -2.27
CD28P10747 AL606517.2-201ENST00000442855 241 ntBASIC0.88□□□□□ -2.27
CD28P10747 MTND1P1-201ENST00000445453 368 ntBASIC0.88□□□□□ -2.27
CD28P10747 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.88□□□□□ -2.27
CD28P10747 RNA5SP220-201ENST00000516298 104 ntBASIC0.88□□□□□ -2.27
CD28P10747 RNU6-1198P-201ENST00000516904 67 ntBASIC0.88□□□□□ -2.27
CD28P10747 RNU6-58P-201ENST00000517143 103 ntBASIC0.88□□□□□ -2.27
CD28P10747 MTND2P38-201ENST00000522536 667 ntBASIC0.88□□□□□ -2.27
CD28P10747 AL512310.8-201ENST00000550183 120 ntBASIC0.88□□□□□ -2.27
CD28P10747 MIR5696-201ENST00000578474 85 ntBASIC0.88□□□□□ -2.27
CD28P10747 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.88□□□□□ -2.27
CD28P10747 AC022217.4-201ENST00000604389 163 ntBASIC0.88□□□□□ -2.27
CD28P10747 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.88□□□□□ -2.27
CD28P10747 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.88□□□□□ -2.27
CD28P10747 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.88□□□□□ -2.27
CD28P10747 MIR1321-201ENST00000637766 79 ntBASIC0.88□□□□□ -2.27
CD28P10747 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.87□□□□□ -2.27
CD28P10747 Y_RNA.151-201ENST00000363566 112 ntBASIC0.87□□□□□ -2.27
CD28P10747 RNU6-331P-201ENST00000384724 107 ntBASIC0.87□□□□□ -2.27
CD28P10747 MIR153-2-201ENST00000385225 87 ntBASIC0.87□□□□□ -2.27
CD28P10747 MIR1185-2-201ENST00000408687 86 ntBASIC0.87□□□□□ -2.27
CD28P10747 Y_RNA.615-201ENST00000410769 117 ntBASIC0.87□□□□□ -2.27
CD28P10747 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.87□□□□□ -2.27
CD28P10747 SNX2P2-201ENST00000424553 323 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms