Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 RNU6-1286P-201ENST00000383871 107 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 RNU6-784P-201ENST00000384330 106 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 SNORD116-8-201ENST00000384365 95 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 MIR618-201ENST00000385287 98 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 RNA5SP219-201ENST00000390940 113 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.69□□□□□ -2.3
COL4A2P08572 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.69□□□□□ -2.3
COL4A2P08572 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.69□□□□□ -2.3
COL4A2P08572 MTND1P26-201ENST00000440488 538 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.69□□□□□ -2.3
COL4A2P08572 SRRM1P2-201ENST00000464531 1192 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.69□□□□□ -2.3
COL4A2P08572 AC117454.1-201ENST00000491120 168 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.69□□□□□ -2.3
COL4A2P08572 SNORD116-28-201ENST00000516123 91 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 RNU6-1038P-201ENST00000516516 104 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 RNU6-856P-201ENST00000516959 98 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 Y_RNA.717-201ENST00000517106 92 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 CYCSP23-201ENST00000519781 313 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.69□□□□□ -2.3
COL4A2P08572 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.69□□□□□ -2.3
COL4A2P08572 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.69□□□□□ -2.3
COL4A2P08572 AL442163.3-201ENST00000554110 156 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 SNORA59B-202ENST00000578183 701 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 CPDP1-201ENST00000579660 283 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 MIR5692C1-201ENST00000585309 91 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 MZT1P2-201ENST00000604387 248 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 MTND4P5-201ENST00000435821 1374 ntBASIC0.69□□□□□ -2.3
COL4A2P08572 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.68□□□□□ -2.3
COL4A2P08572 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
COL4A2P08572 Y_RNA.378-201ENST00000365652 113 ntBASIC0.68□□□□□ -2.3
COL4A2P08572 Y_RNA.471-201ENST00000384312 102 ntBASIC0.68□□□□□ -2.3
COL4A2P08572 MIR450B-201ENST00000401182 78 ntBASIC0.68□□□□□ -2.3
COL4A2P08572 RPS26P42-201ENST00000413485 326 ntBASIC0.68□□□□□ -2.3
COL4A2P08572 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.68□□□□□ -2.3
COL4A2P08572 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.68□□□□□ -2.3
COL4A2P08572 AL606489.2-201ENST00000433886 234 ntBASIC0.68□□□□□ -2.3
COL4A2P08572 AC074290.1-201ENST00000448883 135 ntBASIC0.68□□□□□ -2.3
COL4A2P08572 MTCO3P8-201ENST00000453691 755 ntBASIC0.68□□□□□ -2.3
COL4A2P08572 OR2A41P-201ENST00000473586 105 ntBASIC0.68□□□□□ -2.3
COL4A2P08572 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.68□□□□□ -2.3
COL4A2P08572 HMGB1P29-201ENST00000505659 499 ntBASIC0.68□□□□□ -2.3
COL4A2P08572 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.68□□□□□ -2.3
COL4A2P08572 RNU6-1332P-201ENST00000516666 104 ntBASIC0.68□□□□□ -2.3
COL4A2P08572 RNA5SP437-201ENST00000517249 129 ntBASIC0.68□□□□□ -2.3
COL4A2P08572 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.68□□□□□ -2.3
COL4A2P08572 MIR4709-201ENST00000577272 72 ntBASIC0.68□□□□□ -2.3
COL4A2P08572 AC092747.3-201ENST00000603769 301 ntBASIC0.68□□□□□ -2.3
COL4A2P08572 AC121247.2-201ENST00000604776 136 ntBASIC0.68□□□□□ -2.3
COL4A2P08572 AL365434.2-201ENST00000607979 234 ntBASIC0.68□□□□□ -2.3
COL4A2P08572 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.68□□□□□ -2.3
COL4A2P08572 AC009033.1-201ENST00000624279 431 ntBASIC0.68□□□□□ -2.3
COL4A2P08572 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.68□□□□□ -2.3
COL4A2P08572 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
COL4A2P08572 snoU2-30.2-201ENST00000362805 70 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 Y_RNA.123-201ENST00000363338 102 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 RNU6-1305P-201ENST00000364353 104 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 RNU6-38P-201ENST00000384085 107 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 SNORA67.2-201ENST00000384300 149 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 AL358176.2-201ENST00000425769 204 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.67□□□□□ -2.3
COL4A2P08572 USP9YP14-201ENST00000430663 563 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.67□□□□□ -2.3
COL4A2P08572 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.67□□□□□ -2.3
COL4A2P08572 Y_RNA.654-201ENST00000497848 106 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 HMGN1P12-201ENST00000499125 195 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 RNA5SP404-201ENST00000517118 132 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 AC104383.1-201ENST00000530297 370 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 MTND3P12-201ENST00000559068 328 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 RMST_3.1-201ENST00000611651 109 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 AC005562.2-201ENST00000618264 111 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 AL158209.2-201ENST00000619266 216 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 AP000770.2-201ENST00000623694 100 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 SNORA75-201ENST00000384158 137 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 RNU6-950P-201ENST00000384651 107 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 MIR586-201ENST00000385035 97 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 RNA5SP323-201ENST00000391094 133 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 AL590002.1-201ENST00000406554 418 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 AC009237.7-201ENST00000447357 229 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 snoU13.6-201ENST00000458785 104 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.67□□□□□ -2.3
COL4A2P08572 AC024995.1-201ENST00000523014 93 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 AC026470.2-201ENST00000561492 181 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.67□□□□□ -2.3
COL4A2P08572 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.67□□□□□ -2.3
COL4A2P08572 MIR5583-1-201ENST00000580941 59 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 AL121757.2-201ENST00000611223 313 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 MIR6863-201ENST00000636112 90 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 AC099654.5-201ENST00000636479 350 ntBASIC0.67□□□□□ -2.3
COL4A2P08572 ZNF204P-201ENST00000416749 2397 ntBASIC0.66□□□□□ -2.3
COL4A2P08572 Y_RNA.77-201ENST00000362962 107 ntBASIC0.66□□□□□ -2.3
COL4A2P08572 MIR549A-201ENST00000385268 96 ntBASIC0.66□□□□□ -2.3
COL4A2P08572 RNA5SP127-201ENST00000411051 133 ntBASIC0.66□□□□□ -2.3
COL4A2P08572 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.66□□□□□ -2.3
COL4A2P08572 AC092628.1-201ENST00000436250 252 ntBASIC0.66□□□□□ -2.3
COL4A2P08572 AL359672.1-201ENST00000442302 409 ntBASIC0.66□□□□□ -2.3
COL4A2P08572 PGBD4P5-201ENST00000445958 426 ntBASIC0.66□□□□□ -2.3
COL4A2P08572 SNORA25.14-201ENST00000516481 132 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms