Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.08□□□□□ -2.4
TPM3P06753 RNU7-167P-201ENST00000459160 62 ntBASIC0.08□□□□□ -2.4
TPM3P06753 SNORD11B-201ENST00000607707 90 ntBASIC0.08□□□□□ -2.4
TPM3P06753 AC107308.1-201ENST00000615897 301 ntBASIC0.08□□□□□ -2.4
TPM3P06753 RNU6-1266P-201ENST00000362794 105 ntBASIC0.07□□□□□ -2.4
TPM3P06753 RNU6-1097P-201ENST00000363586 107 ntBASIC0.07□□□□□ -2.4
TPM3P06753 MIR936-201ENST00000401264 98 ntBASIC0.07□□□□□ -2.4
TPM3P06753 MIR1827-201ENST00000408549 66 ntBASIC0.07□□□□□ -2.4
TPM3P06753 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.07□□□□□ -2.4
TPM3P06753 RNU6-1037P-201ENST00000459571 107 ntBASIC0.07□□□□□ -2.4
TPM3P06753 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.07□□□□□ -2.4
TPM3P06753 MIR4431-201ENST00000579990 94 ntBASIC0.07□□□□□ -2.4
TPM3P06753 MIR4438-201ENST00000585271 93 ntBASIC0.07□□□□□ -2.4
TPM3P06753 AC005592.1-201ENST00000566527 1640 ntBASIC0.06□□□□□ -2.4
TPM3P06753 MIRLET7C-201ENST00000362160 84 ntBASIC0.06□□□□□ -2.4
TPM3P06753 MIR1-2-201ENST00000384961 85 ntBASIC0.06□□□□□ -2.4
TPM3P06753 SNORD73A-201ENST00000386062 65 ntBASIC0.06□□□□□ -2.4
TPM3P06753 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.06□□□□□ -2.4
TPM3P06753 SNORD111-201ENST00000408139 94 ntBASIC0.06□□□□□ -2.4
TPM3P06753 RNU6-994P-201ENST00000410507 111 ntBASIC0.06□□□□□ -2.4
TPM3P06753 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.06□□□□□ -2.4
TPM3P06753 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.06□□□□□ -2.4
TPM3P06753 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.06□□□□□ -2.4
TPM3P06753 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.06□□□□□ -2.4
TPM3P06753 NDUFB4P10-201ENST00000452541 359 ntBASIC0.06□□□□□ -2.4
TPM3P06753 AC105313.1-201ENST00000509121 353 ntBASIC0.06□□□□□ -2.4
TPM3P06753 RNU2-56P-201ENST00000516826 190 ntBASIC0.06□□□□□ -2.4
TPM3P06753 RNU6-1223P-201ENST00000517124 104 ntBASIC0.06□□□□□ -2.4
TPM3P06753 RNU6-58P-201ENST00000517143 103 ntBASIC0.06□□□□□ -2.4
TPM3P06753 AF235103.2-201ENST00000525753 346 ntBASIC0.06□□□□□ -2.4
TPM3P06753 AC036111.3-201ENST00000526389 112 ntBASIC0.06□□□□□ -2.4
TPM3P06753 MRPS36P4-201ENST00000534436 298 ntBASIC0.06□□□□□ -2.4
TPM3P06753 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.06□□□□□ -2.4
TPM3P06753 FGF7P1-201ENST00000582820 288 ntBASIC0.06□□□□□ -2.4
TPM3P06753 MIR4298-201ENST00000584380 73 ntBASIC0.06□□□□□ -2.4
TPM3P06753 AC100812.1-201ENST00000607622 580 ntBASIC0.06□□□□□ -2.4
TPM3P06753 RMST_3.1-201ENST00000611651 109 ntBASIC0.06□□□□□ -2.4
TPM3P06753 AL138726.1-201ENST00000614873 333 ntBASIC0.06□□□□□ -2.4
TPM3P06753 MIR8070-201ENST00000616510 88 ntBASIC0.06□□□□□ -2.4
TPM3P06753 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.06□□□□□ -2.4
TPM3P06753 ZNF204P-201ENST00000416749 2397 ntBASIC0.05□□□□□ -2.4
TPM3P06753 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
TPM3P06753 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
TPM3P06753 RNU5F-7P-201ENST00000363696 115 ntBASIC0.05□□□□□ -2.4
TPM3P06753 Y_RNA.336-201ENST00000365307 109 ntBASIC0.05□□□□□ -2.4
TPM3P06753 RNA5SP219-201ENST00000390940 113 ntBASIC0.05□□□□□ -2.4
TPM3P06753 RNA5SP193-201ENST00000410353 107 ntBASIC0.05□□□□□ -2.4
TPM3P06753 Y_RNA.598-201ENST00000410480 95 ntBASIC0.05□□□□□ -2.4
TPM3P06753 MTND3P9-201ENST00000429526 346 ntBASIC0.05□□□□□ -2.4
TPM3P06753 MTATP6P14-201ENST00000455189 673 ntBASIC0.05□□□□□ -2.4
TPM3P06753 MTCO2P18-201ENST00000457151 658 ntBASIC0.05□□□□□ -2.4
TPM3P06753 AF186996.7-201ENST00000492781 209 ntBASIC0.05□□□□□ -2.4
TPM3P06753 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.05□□□□□ -2.4
TPM3P06753 AC105417.1-201ENST00000514691 285 ntBASIC0.05□□□□□ -2.4
TPM3P06753 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
TPM3P06753 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.05□□□□□ -2.4
TPM3P06753 MIR7844-201ENST00000616161 122 ntBASIC0.05□□□□□ -2.4
TPM3P06753 AL589743.1-201ENST00000551932 2712 ntBASIC0.05□□□□□ -2.4
TPM3P06753 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.05□□□□□ -2.4
TPM3P06753 MIR103A1-201ENST00000362165 78 ntBASIC0.04□□□□□ -2.4
TPM3P06753 MIR122-201ENST00000385044 85 ntBASIC0.04□□□□□ -2.4
TPM3P06753 AC098592.1-201ENST00000419352 333 ntBASIC0.04□□□□□ -2.4
TPM3P06753 MTCO2P34-201ENST00000421994 607 ntBASIC0.04□□□□□ -2.4
TPM3P06753 RPL31P35-201ENST00000431058 377 ntBASIC0.04□□□□□ -2.4
TPM3P06753 MRPS10P1-201ENST00000448483 130 ntBASIC0.04□□□□□ -2.4
TPM3P06753 RPS20P10-201ENST00000451209 253 ntBASIC0.04□□□□□ -2.4
TPM3P06753 RNU6-405P-201ENST00000516637 110 ntBASIC0.04□□□□□ -2.4
TPM3P06753 MTND1P5-201ENST00000517906 940 ntBASIC0.04□□□□□ -2.4
TPM3P06753 AP001372.4-201ENST00000524889 472 ntBASIC0.04□□□□□ -2.4
TPM3P06753 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
TPM3P06753 AC027288.2-201ENST00000553028 243 ntBASIC0.04□□□□□ -2.4
TPM3P06753 HIF1AP1-201ENST00000553642 175 ntBASIC0.04□□□□□ -2.4
TPM3P06753 AL158050.2-201ENST00000605336 568 ntBASIC0.04□□□□□ -2.4
TPM3P06753 AC137590.2-201ENST00000619709 240 ntBASIC0.04□□□□□ -2.4
TPM3P06753 AC007671.2-201ENST00000637344 619 ntBASIC0.04□□□□□ -2.4
TPM3P06753 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.04□□□□□ -2.4
TPM3P06753 Y_RNA.100-201ENST00000363141 102 ntBASIC0.03□□□□□ -2.4
TPM3P06753 SNORA25.3-201ENST00000363205 127 ntBASIC0.03□□□□□ -2.4
TPM3P06753 RNU6-137P-201ENST00000363680 108 ntBASIC0.03□□□□□ -2.4
TPM3P06753 SNORA25.9-201ENST00000365087 128 ntBASIC0.03□□□□□ -2.4
TPM3P06753 RNA5SP482-201ENST00000391269 118 ntBASIC0.03□□□□□ -2.4
TPM3P06753 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.03□□□□□ -2.4
TPM3P06753 RNU7-138P-201ENST00000459479 64 ntBASIC0.03□□□□□ -2.4
TPM3P06753 AC091133.4-201ENST00000511142 308 ntBASIC0.03□□□□□ -2.4
TPM3P06753 AC006566.1-201ENST00000608943 513 ntBASIC0.03□□□□□ -2.4
TPM3P06753 AC008133.2-201ENST00000624540 351 ntBASIC0.03□□□□□ -2.4
TPM3P06753 SNORD113-6-201ENST00000363345 75 ntBASIC0.02□□□□□ -2.41
TPM3P06753 RNU6-1297P-201ENST00000384415 104 ntBASIC0.02□□□□□ -2.41
TPM3P06753 MIR562-201ENST00000384894 95 ntBASIC0.02□□□□□ -2.41
TPM3P06753 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
TPM3P06753 AL008987.1-201ENST00000415528 237 ntBASIC0.02□□□□□ -2.41
TPM3P06753 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.02□□□□□ -2.41
TPM3P06753 Y_RNA.123-201ENST00000363338 102 ntBASIC0.01□□□□□ -2.41
TPM3P06753 RNU6-245P-201ENST00000384020 107 ntBASIC0.01□□□□□ -2.41
TPM3P06753 UBE2D3P4-201ENST00000441973 436 ntBASIC0.01□□□□□ -2.41
TPM3P06753 HMGN2P26-201ENST00000463169 339 ntBASIC0.01□□□□□ -2.41
TPM3P06753 AC010469.2-201ENST00000496412 480 ntBASIC0.01□□□□□ -2.41
TPM3P06753 AC005178.1-201ENST00000508392 440 ntBASIC0.01□□□□□ -2.41
TPM3P06753 RN7SKP164-201ENST00000516138 266 ntBASIC0.01□□□□□ -2.41
TPM3P06753 AC087854.1-201ENST00000519706 414 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms