Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RNU6-221P-201ENST00000459541 99 ntBASIC1.07□□□□□ -2.24
HLA-DPB1P04440 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.07□□□□□ -2.24
HLA-DPB1P04440 RNU6-237P-201ENST00000515985 71 ntBASIC1.07□□□□□ -2.24
HLA-DPB1P04440 RNU6-1088P-201ENST00000516850 104 ntBASIC1.07□□□□□ -2.24
HLA-DPB1P04440 RNU6-902P-201ENST00000517212 91 ntBASIC1.07□□□□□ -2.24
HLA-DPB1P04440 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.07□□□□□ -2.24
HLA-DPB1P04440 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.07□□□□□ -2.24
HLA-DPB1P04440 EIF1P4-201ENST00000572664 335 ntBASIC1.07□□□□□ -2.24
HLA-DPB1P04440 AC124303.1-201ENST00000605703 360 ntBASIC1.07□□□□□ -2.24
HLA-DPB1P04440 AC012557.2-201ENST00000605919 418 ntBASIC1.07□□□□□ -2.24
HLA-DPB1P04440 SNORD11B-201ENST00000607707 90 ntBASIC1.07□□□□□ -2.24
HLA-DPB1P04440 AC093783.1-201ENST00000612976 329 ntBASIC1.07□□□□□ -2.24
HLA-DPB1P04440 AL353770.2-201ENST00000620024 78 ntBASIC1.07□□□□□ -2.24
HLA-DPB1P04440 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.07□□□□□ -2.24
HLA-DPB1P04440 Y_RNA.89-201ENST00000363031 102 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 RNU6-1059P-201ENST00000363752 98 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 RNU6-534P-201ENST00000364877 106 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 Y_RNA.450-201ENST00000384198 113 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 Y_RNA.516-201ENST00000384541 124 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 RNU6-831P-201ENST00000384548 107 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 Y_RNA.533-201ENST00000384596 114 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 FGF7P8-201ENST00000402994 292 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 MRPL35P1-201ENST00000404272 572 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 MIR320B2-201ENST00000408479 138 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 AL135790.2-201ENST00000437701 267 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 AC005002.2-201ENST00000438228 269 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 MTATP6P13-201ENST00000438531 667 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 AC069257.2-201ENST00000441819 155 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 AC245517.4-201ENST00000448601 281 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 RPS27P1-201ENST00000450552 247 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.06□□□□□ -2.24
HLA-DPB1P04440 AC099513.1-201ENST00000490423 301 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 AL163195.1-201ENST00000496941 348 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 ACA59.1-201ENST00000515966 143 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 RNU6-720P-201ENST00000516363 108 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 SNORA25.14-201ENST00000516481 132 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 RNA5SP54-201ENST00000516951 92 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 RNA5SP454-201ENST00000517231 127 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.06□□□□□ -2.24
HLA-DPB1P04440 MIR5696-201ENST00000578474 85 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 MIR3660-201ENST00000584845 100 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 AC009248.2-201ENST00000619826 254 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 AC009033.1-201ENST00000624279 431 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 AC100810.6-201ENST00000638068 285 ntBASIC1.06□□□□□ -2.24
HLA-DPB1P04440 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
HLA-DPB1P04440 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HLA-DPB1P04440 Y_RNA.9-201ENST00000362354 101 ntBASIC1.05□□□□□ -2.24
HLA-DPB1P04440 RNU4-12P-201ENST00000365233 139 ntBASIC1.05□□□□□ -2.24
HLA-DPB1P04440 RNU6-245P-201ENST00000384020 107 ntBASIC1.05□□□□□ -2.24
HLA-DPB1P04440 RNU6-17P-201ENST00000384245 107 ntBASIC1.05□□□□□ -2.24
HLA-DPB1P04440 RNU6-18P-201ENST00000384527 107 ntBASIC1.05□□□□□ -2.24
HLA-DPB1P04440 MIR153-2-201ENST00000385225 87 ntBASIC1.05□□□□□ -2.24
HLA-DPB1P04440 RPL21P1-201ENST00000399532 476 ntBASIC1.05□□□□□ -2.24
HLA-DPB1P04440 MIR1253-201ENST00000408273 105 ntBASIC1.05□□□□□ -2.24
HLA-DPB1P04440 Y_RNA.595-201ENST00000410403 105 ntBASIC1.05□□□□□ -2.24
HLA-DPB1P04440 AC004965.1-201ENST00000413033 213 ntBASIC1.05□□□□□ -2.24
HLA-DPB1P04440 AC243428.1-201ENST00000421099 264 ntBASIC1.05□□□□□ -2.24
HLA-DPB1P04440 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.05□□□□□ -2.24
HLA-DPB1P04440 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.05□□□□□ -2.24
HLA-DPB1P04440 FTH1P12-201ENST00000432137 551 ntBASIC1.05□□□□□ -2.24
HLA-DPB1P04440 AC091179.3-201ENST00000474761 144 ntBASIC1.05□□□□□ -2.24
HLA-DPB1P04440 HMGN1P12-201ENST00000499125 195 ntBASIC1.05□□□□□ -2.24
HLA-DPB1P04440 AC079140.2-201ENST00000506193 142 ntBASIC1.05□□□□□ -2.24
HLA-DPB1P04440 AC105313.1-201ENST00000509121 353 ntBASIC1.05□□□□□ -2.24
HLA-DPB1P04440 RNU6-864P-201ENST00000516256 108 ntBASIC1.05□□□□□ -2.24
HLA-DPB1P04440 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.05□□□□□ -2.24
HLA-DPB1P04440 AL442163.3-201ENST00000554110 156 ntBASIC1.05□□□□□ -2.24
HLA-DPB1P04440 SUB1P3-201ENST00000564581 315 ntBASIC1.05□□□□□ -2.24
HLA-DPB1P04440 MIR4709-201ENST00000577272 72 ntBASIC1.05□□□□□ -2.24
HLA-DPB1P04440 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.05□□□□□ -2.24
HLA-DPB1P04440 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.05□□□□□ -2.24
HLA-DPB1P04440 AL161722.3-201ENST00000605789 2983 ntBASIC1.04□□□□□ -2.24
HLA-DPB1P04440 AL391987.6-201ENST00000305671 199 ntBASIC1.04□□□□□ -2.24
HLA-DPB1P04440 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
HLA-DPB1P04440 RNA5SP432-201ENST00000362480 116 ntBASIC1.04□□□□□ -2.24
HLA-DPB1P04440 SNORA72.2-201ENST00000365028 127 ntBASIC1.04□□□□□ -2.24
HLA-DPB1P04440 SNORD26-201ENST00000384147 75 ntBASIC1.04□□□□□ -2.24
HLA-DPB1P04440 RNU6-159P-201ENST00000391080 106 ntBASIC1.04□□□□□ -2.24
HLA-DPB1P04440 COX6CP10-201ENST00000416832 224 ntBASIC1.04□□□□□ -2.24
HLA-DPB1P04440 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.04□□□□□ -2.24
HLA-DPB1P04440 RPL30P13-201ENST00000418873 348 ntBASIC1.04□□□□□ -2.24
HLA-DPB1P04440 AC010154.1-201ENST00000425857 269 ntBASIC1.04□□□□□ -2.24
HLA-DPB1P04440 AC074290.1-201ENST00000448883 135 ntBASIC1.04□□□□□ -2.24
HLA-DPB1P04440 RNU7-34P-201ENST00000459394 64 ntBASIC1.04□□□□□ -2.24
HLA-DPB1P04440 RPL31P58-201ENST00000469001 379 ntBASIC1.04□□□□□ -2.24
HLA-DPB1P04440 RPS29P25-201ENST00000481709 171 ntBASIC1.04□□□□□ -2.24
HLA-DPB1P04440 AC103851.1-201ENST00000506833 274 ntBASIC1.04□□□□□ -2.24
HLA-DPB1P04440 RNU6-1146P-201ENST00000516282 102 ntBASIC1.04□□□□□ -2.24
HLA-DPB1P04440 SNORA31.10-201ENST00000516482 106 ntBASIC1.04□□□□□ -2.24
HLA-DPB1P04440 FRG2DP-202ENST00000566967 323 ntBASIC1.04□□□□□ -2.24
HLA-DPB1P04440 AL929325.1-201ENST00000603096 117 ntBASIC1.04□□□□□ -2.24
HLA-DPB1P04440 AC022217.4-201ENST00000604389 163 ntBASIC1.04□□□□□ -2.24
HLA-DPB1P04440 AL078604.3-201ENST00000615580 211 ntBASIC1.04□□□□□ -2.24
HLA-DPB1P04440 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
HLA-DPB1P04440 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
HLA-DPB1P04440 RNU6-623P-201ENST00000363143 105 ntBASIC1.03□□□□□ -2.24
HLA-DPB1P04440 Y_RNA.295-201ENST00000364918 102 ntBASIC1.03□□□□□ -2.24
HLA-DPB1P04440 RNU6-1240P-201ENST00000365155 104 ntBASIC1.03□□□□□ -2.24
HLA-DPB1P04440 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
HLA-DPB1P04440 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms