Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.89□□□□□ -2.27
MT-ND4P03905 MTCO2P30-201ENST00000503662 364 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 AC019235.1-201ENST00000503847 207 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 SEPT14P4-201ENST00000513445 186 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 RNU1-142P-201ENST00000516682 145 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 RN7SKP88-201ENST00000516847 250 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 Y_RNA.704-201ENST00000516851 102 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 RNA5SP454-201ENST00000517231 127 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 FO082796.1-201ENST00000523795 183 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 AK6P2-201ENST00000549020 471 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.89□□□□□ -2.27
MT-ND4P03905 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.89□□□□□ -2.27
MT-ND4P03905 7SK.8-201ENST00000612110 250 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 7SK.11-201ENST00000615477 250 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 MIR8065-201ENST00000620577 100 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 7SK.13-201ENST00000622040 250 ntBASIC0.89□□□□□ -2.27
MT-ND4P03905 RNU4-9P-201ENST00000364951 139 ntBASIC0.88□□□□□ -2.27
MT-ND4P03905 RNU6-245P-201ENST00000384020 107 ntBASIC0.88□□□□□ -2.27
MT-ND4P03905 RNU6-483P-201ENST00000384088 108 ntBASIC0.88□□□□□ -2.27
MT-ND4P03905 SNORD116-1-201ENST00000384335 95 ntBASIC0.88□□□□□ -2.27
MT-ND4P03905 RPL23AP36-201ENST00000413895 458 ntBASIC0.88□□□□□ -2.27
MT-ND4P03905 PCMTD1P1-201ENST00000455560 355 ntBASIC0.88□□□□□ -2.27
MT-ND4P03905 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.88□□□□□ -2.27
MT-ND4P03905 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.88□□□□□ -2.27
MT-ND4P03905 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.88□□□□□ -2.27
MT-ND4P03905 AC107401.1-201ENST00000503426 685 ntBASIC0.88□□□□□ -2.27
MT-ND4P03905 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.88□□□□□ -2.27
MT-ND4P03905 SNORA25.14-201ENST00000516481 132 ntBASIC0.88□□□□□ -2.27
MT-ND4P03905 RNU6-58P-201ENST00000517143 103 ntBASIC0.88□□□□□ -2.27
MT-ND4P03905 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.88□□□□□ -2.27
MT-ND4P03905 ZNF519P2-201ENST00000557032 169 ntBASIC0.88□□□□□ -2.27
MT-ND4P03905 AL390123.1-201ENST00000603216 237 ntBASIC0.88□□□□□ -2.27
MT-ND4P03905 SNORD114-21-201ENST00000606412 72 ntBASIC0.88□□□□□ -2.27
MT-ND4P03905 AC245008.1-201ENST00000608123 476 ntBASIC0.88□□□□□ -2.27
MT-ND4P03905 AL359075.3-201ENST00000613288 217 ntBASIC0.88□□□□□ -2.27
MT-ND4P03905 AC006504.8-201ENST00000621046 635 ntBASIC0.88□□□□□ -2.27
MT-ND4P03905 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.88□□□□□ -2.27
MT-ND4P03905 AC099654.12-201ENST00000639868 649 ntBASIC0.88□□□□□ -2.27
MT-ND4P03905 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
MT-ND4P03905 Y_RNA.51-201ENST00000362725 102 ntBASIC0.87□□□□□ -2.27
MT-ND4P03905 RNU6-873P-201ENST00000363833 107 ntBASIC0.87□□□□□ -2.27
MT-ND4P03905 SNORD115-32-201ENST00000364079 82 ntBASIC0.87□□□□□ -2.27
MT-ND4P03905 Y_RNA.319-201ENST00000365138 92 ntBASIC0.87□□□□□ -2.27
MT-ND4P03905 MIR1185-2-201ENST00000408687 86 ntBASIC0.87□□□□□ -2.27
MT-ND4P03905 RNU6-908P-201ENST00000410160 94 ntBASIC0.87□□□□□ -2.27
MT-ND4P03905 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.87□□□□□ -2.27
MT-ND4P03905 RNU6-1281P-201ENST00000516223 105 ntBASIC0.87□□□□□ -2.27
MT-ND4P03905 RNU7-128P-201ENST00000517247 62 ntBASIC0.87□□□□□ -2.27
MT-ND4P03905 AC027288.2-201ENST00000553028 243 ntBASIC0.87□□□□□ -2.27
MT-ND4P03905 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.87□□□□□ -2.27
MT-ND4P03905 FRG2DP-202ENST00000566967 323 ntBASIC0.87□□□□□ -2.27
MT-ND4P03905 AC092954.2-201ENST00000609103 430 ntBASIC0.87□□□□□ -2.27
MT-ND4P03905 MIR6078-201ENST00000611069 100 ntBASIC0.87□□□□□ -2.27
MT-ND4P03905 DISC2.1-201ENST00000612827 205 ntBASIC0.87□□□□□ -2.27
MT-ND4P03905 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.87□□□□□ -2.27
MT-ND4P03905 MIR8054-201ENST00000620877 86 ntBASIC0.87□□□□□ -2.27
MT-ND4P03905 AC068647.2-201ENST00000637380 353 ntBASIC0.87□□□□□ -2.27
MT-ND4P03905 MTND4P12-201ENST00000498999 1377 ntBASIC0.86□□□□□ -2.27
MT-ND4P03905 AL391987.6-201ENST00000305671 199 ntBASIC0.86□□□□□ -2.27
MT-ND4P03905 RNU1-22P-201ENST00000363334 158 ntBASIC0.86□□□□□ -2.27
MT-ND4P03905 Y_RNA.140-201ENST00000363474 103 ntBASIC0.86□□□□□ -2.27
MT-ND4P03905 RNU6-727P-201ENST00000363592 107 ntBASIC0.86□□□□□ -2.27
MT-ND4P03905 Y_RNA.415-201ENST00000384012 112 ntBASIC0.86□□□□□ -2.27
MT-ND4P03905 RNU6-950P-201ENST00000384651 107 ntBASIC0.86□□□□□ -2.27
MT-ND4P03905 SNORA12.1-201ENST00000390873 148 ntBASIC0.86□□□□□ -2.27
MT-ND4P03905 RNU6-482P-201ENST00000391068 107 ntBASIC0.86□□□□□ -2.27
MT-ND4P03905 RNU6-1186P-201ENST00000410429 97 ntBASIC0.86□□□□□ -2.27
MT-ND4P03905 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.86□□□□□ -2.27
MT-ND4P03905 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.86□□□□□ -2.27
MT-ND4P03905 MTCO3P18-201ENST00000440206 761 ntBASIC0.86□□□□□ -2.27
MT-ND4P03905 RNU7-66P-201ENST00000459469 62 ntBASIC0.86□□□□□ -2.27
MT-ND4P03905 RPS23P4-201ENST00000487908 423 ntBASIC0.86□□□□□ -2.27
MT-ND4P03905 RNU6-165P-201ENST00000517170 99 ntBASIC0.86□□□□□ -2.27
MT-ND4P03905 AC136932.1-201ENST00000574771 208 ntBASIC0.86□□□□□ -2.27
MT-ND4P03905 MIR4524B-201ENST00000581569 115 ntBASIC0.86□□□□□ -2.27
MT-ND4P03905 POLR3GP2-201ENST00000588366 668 ntBASIC0.86□□□□□ -2.27
MT-ND4P03905 AL162413.1-201ENST00000603198 110 ntBASIC0.86□□□□□ -2.27
MT-ND4P03905 AP000942.3-201ENST00000603702 160 ntBASIC0.86□□□□□ -2.27
MT-ND4P03905 AL138726.1-201ENST00000614873 333 ntBASIC0.86□□□□□ -2.27
MT-ND4P03905 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.86□□□□□ -2.27
MT-ND4P03905 AC012676.2-201ENST00000619258 186 ntBASIC0.86□□□□□ -2.27
MT-ND4P03905 AC099654.5-201ENST00000636479 350 ntBASIC0.86□□□□□ -2.27
MT-ND4P03905 AL391516.1-201ENST00000554380 2449 ntBASIC0.85□□□□□ -2.27
MT-ND4P03905 Y_RNA.256-201ENST00000364594 104 ntBASIC0.85□□□□□ -2.27
MT-ND4P03905 RNU6-1187P-201ENST00000364771 110 ntBASIC0.85□□□□□ -2.27
MT-ND4P03905 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.85□□□□□ -2.27
MT-ND4P03905 MIR517A-201ENST00000385001 87 ntBASIC0.85□□□□□ -2.27
MT-ND4P03905 MIR153-2-201ENST00000385225 87 ntBASIC0.85□□□□□ -2.27
MT-ND4P03905 RNU6-440P-201ENST00000390882 105 ntBASIC0.85□□□□□ -2.27
MT-ND4P03905 RN7SKP200-201ENST00000410564 320 ntBASIC0.85□□□□□ -2.27
MT-ND4P03905 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.85□□□□□ -2.27
MT-ND4P03905 AC245047.3-201ENST00000429428 127 ntBASIC0.85□□□□□ -2.27
MT-ND4P03905 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.85□□□□□ -2.27
MT-ND4P03905 PGBD4P5-201ENST00000445958 426 ntBASIC0.85□□□□□ -2.27
MT-ND4P03905 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.85□□□□□ -2.27
MT-ND4P03905 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.85□□□□□ -2.27
MT-ND4P03905 HMGN2P26-201ENST00000463169 339 ntBASIC0.85□□□□□ -2.27
MT-ND4P03905 AC087343.1-201ENST00000477341 475 ntBASIC0.85□□□□□ -2.27
MT-ND4P03905 RPL30P10-201ENST00000488148 337 ntBASIC0.85□□□□□ -2.27
MT-ND4P03905 UBL5P1-201ENST00000507979 193 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms