Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.82□□□□□ -2.28
SNX4O95219 MIR6767-201ENST00000637302 66 ntBASIC0.82□□□□□ -2.28
SNX4O95219 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SNX4O95219 U3.8-201ENST00000363675 217 ntBASIC0.81□□□□□ -2.28
SNX4O95219 MIR521-1-201ENST00000384902 87 ntBASIC0.81□□□□□ -2.28
SNX4O95219 MIR100-201ENST00000385259 80 ntBASIC0.81□□□□□ -2.28
SNX4O95219 RNU11-5P-201ENST00000391216 129 ntBASIC0.81□□□□□ -2.28
SNX4O95219 AF228730.1-201ENST00000397972 663 ntBASIC0.81□□□□□ -2.28
SNX4O95219 MIR942-201ENST00000401111 86 ntBASIC0.81□□□□□ -2.28
SNX4O95219 RPL23AP75-201ENST00000491601 451 ntBASIC0.81□□□□□ -2.28
SNX4O95219 MTCO1P29-201ENST00000496868 288 ntBASIC0.81□□□□□ -2.28
SNX4O95219 RNU6-947P-201ENST00000516264 106 ntBASIC0.81□□□□□ -2.28
SNX4O95219 RNA5SP454-201ENST00000517231 127 ntBASIC0.81□□□□□ -2.28
SNX4O95219 RNU7-128P-201ENST00000517247 62 ntBASIC0.81□□□□□ -2.28
SNX4O95219 MTND1P5-201ENST00000517906 940 ntBASIC0.81□□□□□ -2.28
SNX4O95219 APOOP3-201ENST00000536787 586 ntBASIC0.81□□□□□ -2.28
SNX4O95219 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.81□□□□□ -2.28
SNX4O95219 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.81□□□□□ -2.28
SNX4O95219 FAM106DP-201ENST00000586416 501 ntBASIC0.81□□□□□ -2.28
SNX4O95219 AC040904.1-201ENST00000590850 223 ntBASIC0.81□□□□□ -2.28
SNX4O95219 AC091931.1-201ENST00000623488 728 ntBASIC0.81□□□□□ -2.28
SNX4O95219 AP000568.1-201ENST00000282964 442 ntBASIC0.8□□□□□ -2.28
SNX4O95219 SNORD115-8-201ENST00000363856 82 ntBASIC0.8□□□□□ -2.28
SNX4O95219 SNORD115-38-201ENST00000365037 82 ntBASIC0.8□□□□□ -2.28
SNX4O95219 SNORD41-201ENST00000386967 70 ntBASIC0.8□□□□□ -2.28
SNX4O95219 MIR1185-2-201ENST00000408687 86 ntBASIC0.8□□□□□ -2.28
SNX4O95219 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.8□□□□□ -2.28
SNX4O95219 AL606490.4-201ENST00000423117 127 ntBASIC0.8□□□□□ -2.28
SNX4O95219 AC073464.1-201ENST00000429823 534 ntBASIC0.8□□□□□ -2.28
SNX4O95219 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.8□□□□□ -2.28
SNX4O95219 CBX3P8-201ENST00000532412 525 ntBASIC0.8□□□□□ -2.28
SNX4O95219 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.8□□□□□ -2.28
SNX4O95219 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.8□□□□□ -2.28
SNX4O95219 CPDP1-201ENST00000579660 283 ntBASIC0.8□□□□□ -2.28
SNX4O95219 AC092747.3-201ENST00000603769 301 ntBASIC0.8□□□□□ -2.28
SNX4O95219 AC008163.1-202ENST00000636004 2889 ntBASIC0.8□□□□□ -2.28
SNX4O95219 MIR373-201ENST00000362273 69 ntBASIC0.79□□□□□ -2.28
SNX4O95219 Y_RNA.224-201ENST00000364308 111 ntBASIC0.79□□□□□ -2.28
SNX4O95219 SNORA2.2-201ENST00000365473 135 ntBASIC0.79□□□□□ -2.28
SNX4O95219 MIR520E-201ENST00000384867 87 ntBASIC0.79□□□□□ -2.28
SNX4O95219 SNORA12.1-201ENST00000390873 148 ntBASIC0.79□□□□□ -2.28
SNX4O95219 RNA5SP504-201ENST00000410676 117 ntBASIC0.79□□□□□ -2.28
SNX4O95219 RNU6-325P-201ENST00000411132 105 ntBASIC0.79□□□□□ -2.28
SNX4O95219 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.79□□□□□ -2.28
SNX4O95219 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.79□□□□□ -2.28
SNX4O95219 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.79□□□□□ -2.28
SNX4O95219 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.79□□□□□ -2.28
SNX4O95219 MIR4778-201ENST00000577635 80 ntBASIC0.79□□□□□ -2.28
SNX4O95219 AC024933.1-201ENST00000608472 348 ntBASIC0.79□□□□□ -2.28
SNX4O95219 AC027514.1-201ENST00000588561 1603 ntBASIC0.78□□□□□ -2.28
SNX4O95219 AC018630.2-201ENST00000534866 2403 ntBASIC0.78□□□□□ -2.28
SNX4O95219 RNU6-1103P-201ENST00000384150 107 ntBASIC0.78□□□□□ -2.28
SNX4O95219 RNY3P9-201ENST00000384727 106 ntBASIC0.78□□□□□ -2.28
SNX4O95219 SNORD37.1-201ENST00000390968 65 ntBASIC0.78□□□□□ -2.28
SNX4O95219 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.78□□□□□ -2.28
SNX4O95219 STAG3L5P-204ENST00000443759 179 ntBASIC0.78□□□□□ -2.28
SNX4O95219 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.78□□□□□ -2.28
SNX4O95219 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.28
SNX4O95219 MTND1P24-201ENST00000552175 861 ntBASIC0.78□□□□□ -2.28
SNX4O95219 MIR3973-201ENST00000579824 107 ntBASIC0.78□□□□□ -2.28
SNX4O95219 MIR5692C1-201ENST00000585309 91 ntBASIC0.78□□□□□ -2.28
SNX4O95219 Y_RNA.169-201ENST00000363745 96 ntBASIC0.77□□□□□ -2.29
SNX4O95219 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
SNX4O95219 Y_RNA.363-201ENST00000365529 113 ntBASIC0.77□□□□□ -2.29
SNX4O95219 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SNX4O95219 RNU6-1158P-201ENST00000391167 107 ntBASIC0.77□□□□□ -2.29
SNX4O95219 AL663109.1-201ENST00000411498 844 ntBASIC0.77□□□□□ -2.29
SNX4O95219 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.77□□□□□ -2.29
SNX4O95219 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.77□□□□□ -2.29
SNX4O95219 MTCO3P18-201ENST00000440206 761 ntBASIC0.77□□□□□ -2.29
SNX4O95219 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.77□□□□□ -2.29
SNX4O95219 SNORA19.2-201ENST00000516013 114 ntBASIC0.77□□□□□ -2.29
SNX4O95219 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.77□□□□□ -2.29
SNX4O95219 AC100830.2-201ENST00000581636 240 ntBASIC0.77□□□□□ -2.29
SNX4O95219 FAM71BP1-201ENST00000604431 523 ntBASIC0.77□□□□□ -2.29
SNX4O95219 RNU6-969P-201ENST00000383900 105 ntBASIC0.76□□□□□ -2.29
SNX4O95219 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
SNX4O95219 MIR450B-201ENST00000401182 78 ntBASIC0.76□□□□□ -2.29
SNX4O95219 MRPS10P2-201ENST00000431226 381 ntBASIC0.76□□□□□ -2.29
SNX4O95219 RNU7-90P-201ENST00000459216 62 ntBASIC0.76□□□□□ -2.29
SNX4O95219 AC091133.4-201ENST00000511142 308 ntBASIC0.76□□□□□ -2.29
SNX4O95219 AC092436.3-201ENST00000511788 257 ntBASIC0.76□□□□□ -2.29
SNX4O95219 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.76□□□□□ -2.29
SNX4O95219 RNA5SP255-201ENST00000516370 107 ntBASIC0.76□□□□□ -2.29
SNX4O95219 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.76□□□□□ -2.29
SNX4O95219 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.76□□□□□ -2.29
SNX4O95219 AC080078.2-201ENST00000603766 501 ntBASIC0.76□□□□□ -2.29
SNX4O95219 AC006435.5-201ENST00000624486 112 ntBASIC0.76□□□□□ -2.29
SNX4O95219 CASC19-280ENST00000642102 1351 ntBASIC0.75□□□□□ -2.29
SNX4O95219 RNU5F-3P-201ENST00000363767 117 ntBASIC0.75□□□□□ -2.29
SNX4O95219 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.75□□□□□ -2.29
SNX4O95219 FABP5P4-201ENST00000437203 171 ntBASIC0.75□□□□□ -2.29
SNX4O95219 MTCO2P7-201ENST00000446518 666 ntBASIC0.75□□□□□ -2.29
SNX4O95219 Y_RNA.654-201ENST00000497848 106 ntBASIC0.75□□□□□ -2.29
SNX4O95219 AC091885.1-201ENST00000506658 268 ntBASIC0.75□□□□□ -2.29
SNX4O95219 SNORA25.14-201ENST00000516481 132 ntBASIC0.75□□□□□ -2.29
SNX4O95219 RNU7-28P-201ENST00000516759 62 ntBASIC0.75□□□□□ -2.29
SNX4O95219 MIR4698-201ENST00000577795 80 ntBASIC0.75□□□□□ -2.29
SNX4O95219 AC010620.1-201ENST00000601088 1102 ntBASIC0.75□□□□□ -2.29
SNX4O95219 AC108706.1-201ENST00000611053 297 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms