Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC060773.1-201ENST00000421698 310 ntBASIC2.08□□□□□ -2.08
RTN3O95197 AC011406.1-201ENST00000512440 370 ntBASIC2.08□□□□□ -2.08
RTN3O95197 RNU6-1041P-201ENST00000516254 102 ntBASIC2.08□□□□□ -2.08
RTN3O95197 APOOP3-201ENST00000536787 586 ntBASIC2.08□□□□□ -2.08
RTN3O95197 AC090617.3-201ENST00000573670 475 ntBASIC2.08□□□□□ -2.08
RTN3O95197 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.08□□□□□ -2.08
RTN3O95197 AP001094.1-201ENST00000579805 193 ntBASIC2.08□□□□□ -2.08
RTN3O95197 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.08□□□□□ -2.08
RTN3O95197 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RTN3O95197 Y_RNA.4-201ENST00000362333 112 ntBASIC2.07□□□□□ -2.08
RTN3O95197 U3.8-201ENST00000363675 217 ntBASIC2.07□□□□□ -2.08
RTN3O95197 Y_RNA.415-201ENST00000384012 112 ntBASIC2.07□□□□□ -2.08
RTN3O95197 RNU6-281P-201ENST00000384212 103 ntBASIC2.07□□□□□ -2.08
RTN3O95197 RNU6-1297P-201ENST00000384415 104 ntBASIC2.07□□□□□ -2.08
RTN3O95197 RNU6-310P-201ENST00000384655 107 ntBASIC2.07□□□□□ -2.08
RTN3O95197 Y_RNA.646-201ENST00000410980 101 ntBASIC2.07□□□□□ -2.08
RTN3O95197 RNU6-57P-201ENST00000411348 103 ntBASIC2.07□□□□□ -2.08
RTN3O95197 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.07□□□□□ -2.08
RTN3O95197 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.07□□□□□ -2.08
RTN3O95197 RNU7-87P-201ENST00000459343 62 ntBASIC2.07□□□□□ -2.08
RTN3O95197 RPL23AP42-201ENST00000471152 471 ntBASIC2.07□□□□□ -2.08
RTN3O95197 AC091951.2-201ENST00000500762 203 ntBASIC2.07□□□□□ -2.08
RTN3O95197 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.07□□□□□ -2.08
RTN3O95197 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.07□□□□□ -2.08
RTN3O95197 AL117351.2-201ENST00000513571 157 ntBASIC2.07□□□□□ -2.08
RTN3O95197 RNA5SP182-201ENST00000516064 82 ntBASIC2.07□□□□□ -2.08
RTN3O95197 AC093023.1-201ENST00000547375 507 ntBASIC2.07□□□□□ -2.08
RTN3O95197 SUB1P4-201ENST00000566062 339 ntBASIC2.07□□□□□ -2.08
RTN3O95197 AC022254.1-201ENST00000567857 235 ntBASIC2.07□□□□□ -2.08
RTN3O95197 MIR5094-201ENST00000578766 85 ntBASIC2.07□□□□□ -2.08
RTN3O95197 MIR4713-201ENST00000582691 75 ntBASIC2.07□□□□□ -2.08
RTN3O95197 AC069114.2-201ENST00000604699 304 ntBASIC2.07□□□□□ -2.08
RTN3O95197 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.07□□□□□ -2.08
RTN3O95197 AC133104.2-201ENST00000615272 193 ntBASIC2.07□□□□□ -2.08
RTN3O95197 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.07□□□□□ -2.08
RTN3O95197 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
RTN3O95197 SNORD87-201ENST00000364849 89 ntBASIC2.06□□□□□ -2.08
RTN3O95197 Y_RNA.338-201ENST00000365320 114 ntBASIC2.06□□□□□ -2.08
RTN3O95197 Y_RNA.387-201ENST00000383918 102 ntBASIC2.06□□□□□ -2.08
RTN3O95197 RNA5SP213-201ENST00000391031 106 ntBASIC2.06□□□□□ -2.08
RTN3O95197 SNORA75.6-201ENST00000391318 127 ntBASIC2.06□□□□□ -2.08
RTN3O95197 RNA5SP100-201ENST00000410903 110 ntBASIC2.06□□□□□ -2.08
RTN3O95197 RNA5SP59-201ENST00000410922 110 ntBASIC2.06□□□□□ -2.08
RTN3O95197 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.06□□□□□ -2.08
RTN3O95197 AC092423.1-201ENST00000430165 186 ntBASIC2.06□□□□□ -2.08
RTN3O95197 UBE2V1P7-201ENST00000446395 340 ntBASIC2.06□□□□□ -2.08
RTN3O95197 MTND5P20-201ENST00000448677 143 ntBASIC2.06□□□□□ -2.08
RTN3O95197 HMGB3P17-201ENST00000504195 649 ntBASIC2.06□□□□□ -2.08
RTN3O95197 RNU6-1146P-201ENST00000516282 102 ntBASIC2.06□□□□□ -2.08
RTN3O95197 Y_RNA.683-201ENST00000516508 93 ntBASIC2.06□□□□□ -2.08
RTN3O95197 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.06□□□□□ -2.08
RTN3O95197 RNU6-264P-201ENST00000517134 104 ntBASIC2.06□□□□□ -2.08
RTN3O95197 MIR5089-201ENST00000580047 84 ntBASIC2.06□□□□□ -2.08
RTN3O95197 MZT1P2-201ENST00000604387 248 ntBASIC2.06□□□□□ -2.08
RTN3O95197 AL132765.2-201ENST00000610812 351 ntBASIC2.06□□□□□ -2.08
RTN3O95197 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.06□□□□□ -2.08
RTN3O95197 MIR7111-201ENST00000619751 72 ntBASIC2.06□□□□□ -2.08
RTN3O95197 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.06□□□□□ -2.08
RTN3O95197 MTND5P35-201ENST00000557537 1720 ntBASIC2.05□□□□□ -2.08
RTN3O95197 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RTN3O95197 RNU6-874P-201ENST00000362390 105 ntBASIC2.05□□□□□ -2.08
RTN3O95197 RNU6-862P-201ENST00000362804 105 ntBASIC2.05□□□□□ -2.08
RTN3O95197 RNU1-96P-201ENST00000364163 162 ntBASIC2.05□□□□□ -2.08
RTN3O95197 Y_RNA.384-201ENST00000383909 102 ntBASIC2.05□□□□□ -2.08
RTN3O95197 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
RTN3O95197 MIR676-201ENST00000390702 67 ntBASIC2.05□□□□□ -2.08
RTN3O95197 MTCYBP4-201ENST00000401524 249 ntBASIC2.05□□□□□ -2.08
RTN3O95197 AC008134.1-201ENST00000420943 193 ntBASIC2.05□□□□□ -2.08
RTN3O95197 HMGN2P19-201ENST00000425149 265 ntBASIC2.05□□□□□ -2.08
RTN3O95197 EIF1P2-201ENST00000428233 350 ntBASIC2.05□□□□□ -2.08
RTN3O95197 AC099677.2-201ENST00000436385 175 ntBASIC2.05□□□□□ -2.08
RTN3O95197 AC093019.1-201ENST00000443135 252 ntBASIC2.05□□□□□ -2.08
RTN3O95197 Y_RNA.653-201ENST00000459091 95 ntBASIC2.05□□□□□ -2.08
RTN3O95197 RNU6-221P-201ENST00000459541 99 ntBASIC2.05□□□□□ -2.08
RTN3O95197 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.05□□□□□ -2.08
RTN3O95197 RNU6-277P-201ENST00000516272 106 ntBASIC2.05□□□□□ -2.08
RTN3O95197 RNU6-875P-201ENST00000516488 106 ntBASIC2.05□□□□□ -2.08
RTN3O95197 FRG2DP-202ENST00000566967 323 ntBASIC2.05□□□□□ -2.08
RTN3O95197 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.05□□□□□ -2.08
RTN3O95197 AC006001.4-201ENST00000622243 395 ntBASIC2.05□□□□□ -2.08
RTN3O95197 MIR1302-1-201ENST00000637932 143 ntBASIC2.05□□□□□ -2.08
RTN3O95197 RNA5SP160-201ENST00000364866 120 ntBASIC2.04□□□□□ -2.08
RTN3O95197 MIR583-201ENST00000384846 75 ntBASIC2.04□□□□□ -2.08
RTN3O95197 MIR548B-201ENST00000385247 97 ntBASIC2.04□□□□□ -2.08
RTN3O95197 U8.13-201ENST00000390842 128 ntBASIC2.04□□□□□ -2.08
RTN3O95197 RNU6-1009P-201ENST00000390996 107 ntBASIC2.04□□□□□ -2.08
RTN3O95197 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.04□□□□□ -2.08
RTN3O95197 CST2P1-201ENST00000425770 87 ntBASIC2.04□□□□□ -2.08
RTN3O95197 Y_RNA.702-201ENST00000516843 96 ntBASIC2.04□□□□□ -2.08
RTN3O95197 CYCSP23-201ENST00000519781 313 ntBASIC2.04□□□□□ -2.08
RTN3O95197 AC125232.2-201ENST00000592457 143 ntBASIC2.04□□□□□ -2.08
RTN3O95197 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.04□□□□□ -2.08
RTN3O95197 AC010900.2-201ENST00000604508 210 ntBASIC2.04□□□□□ -2.08
RTN3O95197 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.04□□□□□ -2.08
RTN3O95197 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
RTN3O95197 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
RTN3O95197 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.03□□□□□ -2.08
RTN3O95197 AL356292.1-201ENST00000283110 373 ntBASIC2.03□□□□□ -2.08
RTN3O95197 Y_RNA.140-201ENST00000363474 103 ntBASIC2.03□□□□□ -2.08
RTN3O95197 Y_RNA.577-201ENST00000384794 101 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms