Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 GHRLOS.1-201ENST00000610995 70 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 AL353770.2-201ENST00000620024 78 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 AC006504.8-201ENST00000621046 635 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 Z69908.1-201ENST00000622603 247 ntBASIC0.73□□□□□ -2.29
UPK1BO75841 MTND4P12-201ENST00000498999 1377 ntBASIC0.72□□□□□ -2.29
UPK1BO75841 Y_RNA.124-201ENST00000363339 93 ntBASIC0.72□□□□□ -2.29
UPK1BO75841 MIR19B1-201ENST00000384829 87 ntBASIC0.72□□□□□ -2.29
UPK1BO75841 MIR514A2-201ENST00000385131 88 ntBASIC0.72□□□□□ -2.29
UPK1BO75841 MIR514A3-201ENST00000385132 88 ntBASIC0.72□□□□□ -2.29
UPK1BO75841 RNA5SP213-201ENST00000391031 106 ntBASIC0.72□□□□□ -2.29
UPK1BO75841 RNU4-62P-201ENST00000410125 130 ntBASIC0.72□□□□□ -2.29
UPK1BO75841 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0.72□□□□□ -2.29
UPK1BO75841 AC245047.7-201ENST00000440265 293 ntBASIC0.72□□□□□ -2.29
UPK1BO75841 AC091885.1-201ENST00000506658 268 ntBASIC0.72□□□□□ -2.29
UPK1BO75841 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.72□□□□□ -2.29
UPK1BO75841 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.72□□□□□ -2.29
UPK1BO75841 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.72□□□□□ -2.29
UPK1BO75841 AC006362.1-201ENST00000567392 174 ntBASIC0.72□□□□□ -2.29
UPK1BO75841 AC022432.1-201ENST00000595739 310 ntBASIC0.72□□□□□ -2.29
UPK1BO75841 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.72□□□□□ -2.29
UPK1BO75841 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.72□□□□□ -2.29
UPK1BO75841 AC097520.1-201ENST00000624435 385 ntBASIC0.72□□□□□ -2.29
UPK1BO75841 RNU6-1266P-201ENST00000362794 105 ntBASIC0.71□□□□□ -2.3
UPK1BO75841 Y_RNA.100-201ENST00000363141 102 ntBASIC0.71□□□□□ -2.3
UPK1BO75841 U3.8-201ENST00000363675 217 ntBASIC0.71□□□□□ -2.3
UPK1BO75841 RNU6-1322P-201ENST00000364309 107 ntBASIC0.71□□□□□ -2.3
UPK1BO75841 Y_RNA.319-201ENST00000365138 92 ntBASIC0.71□□□□□ -2.3
UPK1BO75841 Y_RNA.582-201ENST00000391023 95 ntBASIC0.71□□□□□ -2.3
UPK1BO75841 RNU6-1054P-201ENST00000411293 104 ntBASIC0.71□□□□□ -2.3
UPK1BO75841 RPL30P16-201ENST00000419341 429 ntBASIC0.71□□□□□ -2.3
UPK1BO75841 RNU7-95P-201ENST00000459222 64 ntBASIC0.71□□□□□ -2.3
UPK1BO75841 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.71□□□□□ -2.3
UPK1BO75841 SNORD79.1-201ENST00000516069 84 ntBASIC0.71□□□□□ -2.3
UPK1BO75841 RNU6-835P-201ENST00000516974 104 ntBASIC0.71□□□□□ -2.3
UPK1BO75841 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.71□□□□□ -2.3
UPK1BO75841 AC023157.2-201ENST00000540596 141 ntBASIC0.71□□□□□ -2.3
UPK1BO75841 UBL5P4-201ENST00000562584 236 ntBASIC0.71□□□□□ -2.3
UPK1BO75841 FAM71BP1-201ENST00000604431 523 ntBASIC0.71□□□□□ -2.3
UPK1BO75841 RNU6-199P-201ENST00000362954 107 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 RNU6-1252P-201ENST00000363054 104 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 SNORD115-8-201ENST00000363856 82 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 RNU6-522P-201ENST00000364497 107 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 RNU4-9P-201ENST00000364951 139 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 SNORD115-38-201ENST00000365037 82 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 RNU1-36P-201ENST00000365130 165 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 Y_RNA.372-201ENST00000365599 102 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 Y_RNA.553-201ENST00000384670 102 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 SNORA17.3-201ENST00000391159 129 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 RNU6-648P-201ENST00000410190 107 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.7□□□□□ -2.3
UPK1BO75841 POLR2J4-204ENST00000418424 324 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 MTCO1P20-201ENST00000425366 358 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 CALM2P4-201ENST00000430810 426 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.7□□□□□ -2.3
UPK1BO75841 AC093850.1-201ENST00000454121 251 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 AC091179.3-201ENST00000474761 144 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.7□□□□□ -2.3
UPK1BO75841 PDCD5P2-201ENST00000507570 312 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 RNU6-917P-201ENST00000516294 104 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 AP000889.1-201ENST00000530968 660 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 AC027288.2-201ENST00000553028 243 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 MIR4438-201ENST00000585271 93 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 AC211469.2-201ENST00000605461 205 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 AL157834.3-201ENST00000615543 103 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 AL158209.2-201ENST00000619266 216 ntBASIC0.7□□□□□ -2.3
UPK1BO75841 RNU6-254P-201ENST00000363377 107 ntBASIC0.69□□□□□ -2.3
UPK1BO75841 SNORD114-24-201ENST00000365029 72 ntBASIC0.69□□□□□ -2.3
UPK1BO75841 RNU6-541P-201ENST00000384709 110 ntBASIC0.69□□□□□ -2.3
UPK1BO75841 AF228730.1-201ENST00000397972 663 ntBASIC0.69□□□□□ -2.3
UPK1BO75841 SNORA11.2-201ENST00000408318 127 ntBASIC0.69□□□□□ -2.3
UPK1BO75841 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.69□□□□□ -2.3
UPK1BO75841 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.69□□□□□ -2.3
UPK1BO75841 AL590632.1-201ENST00000424289 371 ntBASIC0.69□□□□□ -2.3
UPK1BO75841 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.69□□□□□ -2.3
UPK1BO75841 RPS4XP11-201ENST00000446897 772 ntBASIC0.69□□□□□ -2.3
UPK1BO75841 AC087343.1-201ENST00000477341 475 ntBASIC0.69□□□□□ -2.3
UPK1BO75841 RPS27P22-201ENST00000478056 241 ntBASIC0.69□□□□□ -2.3
UPK1BO75841 MTCO2P30-201ENST00000503662 364 ntBASIC0.69□□□□□ -2.3
UPK1BO75841 AC010424.1-201ENST00000506336 297 ntBASIC0.69□□□□□ -2.3
UPK1BO75841 PSMC1P5-201ENST00000512850 177 ntBASIC0.69□□□□□ -2.3
UPK1BO75841 RNU6-197P-201ENST00000516680 100 ntBASIC0.69□□□□□ -2.3
UPK1BO75841 AL590705.4-201ENST00000532209 134 ntBASIC0.69□□□□□ -2.3
UPK1BO75841 AL121579.1-201ENST00000555129 305 ntBASIC0.69□□□□□ -2.3
UPK1BO75841 AL162424.1-201ENST00000602325 221 ntBASIC0.69□□□□□ -2.3
UPK1BO75841 RNU6-89P-201ENST00000606519 100 ntBASIC0.69□□□□□ -2.3
UPK1BO75841 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.69□□□□□ -2.3
UPK1BO75841 AC008163.1-202ENST00000636004 2889 ntBASIC0.69□□□□□ -2.3
UPK1BO75841 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.69□□□□□ -2.3
UPK1BO75841 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
UPK1BO75841 Y_RNA.231-201ENST00000364358 102 ntBASIC0.68□□□□□ -2.3
UPK1BO75841 MIR153-2-201ENST00000385225 87 ntBASIC0.68□□□□□ -2.3
UPK1BO75841 MIR653-201ENST00000385279 96 ntBASIC0.68□□□□□ -2.3
UPK1BO75841 U8.16-201ENST00000391279 133 ntBASIC0.68□□□□□ -2.3
UPK1BO75841 DEFB108C-201ENST00000400154 252 ntBASIC0.68□□□□□ -2.3
UPK1BO75841 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
UPK1BO75841 RNU6-1068P-201ENST00000410958 103 ntBASIC0.68□□□□□ -2.3
UPK1BO75841 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.68□□□□□ -2.3
UPK1BO75841 NDUFB4P10-201ENST00000452541 359 ntBASIC0.68□□□□□ -2.3
UPK1BO75841 PCMTD1P1-201ENST00000455560 355 ntBASIC0.68□□□□□ -2.3
UPK1BO75841 SNORD65B-201ENST00000459126 73 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 231.6 ms