Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RNU6-925P-201ENST00000384629 104 ntBASIC-0.62□□□□□ -2.51
SSSCA1O60232 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.62□□□□□ -2.51
SSSCA1O60232 MIR224-201ENST00000384889 81 ntBASIC-0.62□□□□□ -2.51
SSSCA1O60232 MIR938-201ENST00000401216 83 ntBASIC-0.62□□□□□ -2.51
SSSCA1O60232 RNU4-63P-201ENST00000411313 118 ntBASIC-0.62□□□□□ -2.51
SSSCA1O60232 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.62□□□□□ -2.51
SSSCA1O60232 USP9YP29-201ENST00000445112 563 ntBASIC-0.62□□□□□ -2.51
SSSCA1O60232 AC087499.4-201ENST00000448505 178 ntBASIC-0.62□□□□□ -2.51
SSSCA1O60232 HSFY5P-201ENST00000453726 309 ntBASIC-0.62□□□□□ -2.51
SSSCA1O60232 RNA5SP268-201ENST00000516828 124 ntBASIC-0.62□□□□□ -2.51
SSSCA1O60232 AC109479.2-201ENST00000517842 174 ntBASIC-0.62□□□□□ -2.51
SSSCA1O60232 MIR4802-201ENST00000581881 80 ntBASIC-0.62□□□□□ -2.51
SSSCA1O60232 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.62□□□□□ -2.51
SSSCA1O60232 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.62□□□□□ -2.51
SSSCA1O60232 AC026741.1-201ENST00000605892 482 ntBASIC-0.62□□□□□ -2.51
SSSCA1O60232 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.62□□□□□ -2.51
SSSCA1O60232 AL359697.1-201ENST00000624879 587 ntBASIC-0.62□□□□□ -2.51
SSSCA1O60232 RNU6-480P-201ENST00000384332 107 ntBASIC-0.63□□□□□ -2.51
SSSCA1O60232 MIR604-201ENST00000384880 94 ntBASIC-0.63□□□□□ -2.51
SSSCA1O60232 MIR760-201ENST00000390220 80 ntBASIC-0.63□□□□□ -2.51
SSSCA1O60232 RNU2-3P-201ENST00000410144 191 ntBASIC-0.63□□□□□ -2.51
SSSCA1O60232 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.63□□□□□ -2.51
SSSCA1O60232 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.63□□□□□ -2.51
SSSCA1O60232 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.63□□□□□ -2.51
SSSCA1O60232 AL133396.1-201ENST00000432048 687 ntBASIC-0.63□□□□□ -2.51
SSSCA1O60232 AC010486.2-201ENST00000505572 483 ntBASIC-0.63□□□□□ -2.51
SSSCA1O60232 OR8K2P-201ENST00000524645 927 ntBASIC-0.63□□□□□ -2.51
SSSCA1O60232 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.63□□□□□ -2.51
SSSCA1O60232 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.63□□□□□ -2.51
SSSCA1O60232 MIR4493-201ENST00000584016 73 ntBASIC-0.63□□□□□ -2.51
SSSCA1O60232 MIR3666-201ENST00000607845 111 ntBASIC-0.63□□□□□ -2.51
SSSCA1O60232 MIR8084-201ENST00000614105 89 ntBASIC-0.63□□□□□ -2.51
SSSCA1O60232 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.63□□□□□ -2.51
SSSCA1O60232 RNU6-161P-201ENST00000363051 106 ntBASIC-0.64□□□□□ -2.51
SSSCA1O60232 SNORD114-11-201ENST00000363738 75 ntBASIC-0.64□□□□□ -2.51
SSSCA1O60232 RNA5SP368-201ENST00000364298 116 ntBASIC-0.64□□□□□ -2.51
SSSCA1O60232 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.64□□□□□ -2.51
SSSCA1O60232 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.64□□□□□ -2.51
SSSCA1O60232 SNORA36A-201ENST00000384221 132 ntBASIC-0.64□□□□□ -2.51
SSSCA1O60232 RNU6-269P-201ENST00000391077 97 ntBASIC-0.64□□□□□ -2.51
SSSCA1O60232 RPS26P42-201ENST00000413485 326 ntBASIC-0.64□□□□□ -2.51
SSSCA1O60232 AL158053.1-201ENST00000441503 453 ntBASIC-0.64□□□□□ -2.51
SSSCA1O60232 RNU7-94P-201ENST00000459576 63 ntBASIC-0.64□□□□□ -2.51
SSSCA1O60232 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.64□□□□□ -2.51
SSSCA1O60232 AC116562.3-201ENST00000506136 177 ntBASIC-0.64□□□□□ -2.51
SSSCA1O60232 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.64□□□□□ -2.51
SSSCA1O60232 RNU6-377P-201ENST00000515965 102 ntBASIC-0.64□□□□□ -2.51
SSSCA1O60232 RNU6-977P-201ENST00000516411 103 ntBASIC-0.64□□□□□ -2.51
SSSCA1O60232 RNU6-782P-201ENST00000516852 104 ntBASIC-0.64□□□□□ -2.51
SSSCA1O60232 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.64□□□□□ -2.51
SSSCA1O60232 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.64□□□□□ -2.51
SSSCA1O60232 OR4H6P-202ENST00000603819 340 ntBASIC-0.64□□□□□ -2.51
SSSCA1O60232 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-0.65□□□□□ -2.51
SSSCA1O60232 RNU4-73P-201ENST00000363164 141 ntBASIC-0.65□□□□□ -2.51
SSSCA1O60232 MIR454-201ENST00000390180 115 ntBASIC-0.65□□□□□ -2.51
SSSCA1O60232 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.65□□□□□ -2.51
SSSCA1O60232 MIR1284-201ENST00000408337 120 ntBASIC-0.65□□□□□ -2.51
SSSCA1O60232 RNA5SP163-201ENST00000410304 99 ntBASIC-0.65□□□□□ -2.51
SSSCA1O60232 RNU2-62P-201ENST00000410868 191 ntBASIC-0.65□□□□□ -2.51
SSSCA1O60232 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.65□□□□□ -2.51
SSSCA1O60232 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.65□□□□□ -2.51
SSSCA1O60232 AL392103.1-201ENST00000447000 198 ntBASIC-0.65□□□□□ -2.51
SSSCA1O60232 AC074290.1-201ENST00000448883 135 ntBASIC-0.65□□□□□ -2.51
SSSCA1O60232 RNU2-46P-201ENST00000517038 113 ntBASIC-0.65□□□□□ -2.51
SSSCA1O60232 ADI1P3-201ENST00000549509 470 ntBASIC-0.65□□□□□ -2.51
SSSCA1O60232 VN1R87P-201ENST00000596706 487 ntBASIC-0.65□□□□□ -2.51
SSSCA1O60232 MIR4788-201ENST00000639104 80 ntBASIC-0.65□□□□□ -2.51
SSSCA1O60232 RNU6-336P-201ENST00000364891 107 ntBASIC-0.66□□□□□ -2.52
SSSCA1O60232 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.66□□□□□ -2.52
SSSCA1O60232 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.66□□□□□ -2.52
SSSCA1O60232 ERHP2-201ENST00000402323 299 ntBASIC-0.66□□□□□ -2.52
SSSCA1O60232 SNORD100-201ENST00000408573 76 ntBASIC-0.66□□□□□ -2.52
SSSCA1O60232 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.66□□□□□ -2.52
SSSCA1O60232 AC007327.1-201ENST00000447461 264 ntBASIC-0.66□□□□□ -2.52
SSSCA1O60232 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.66□□□□□ -2.52
SSSCA1O60232 RNU7-57P-201ENST00000459540 60 ntBASIC-0.66□□□□□ -2.52
SSSCA1O60232 AC074198.2-201ENST00000508153 258 ntBASIC-0.66□□□□□ -2.52
SSSCA1O60232 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.66□□□□□ -2.52
SSSCA1O60232 RNU6-758P-201ENST00000516292 89 ntBASIC-0.66□□□□□ -2.52
SSSCA1O60232 RNU6-63P-201ENST00000516690 95 ntBASIC-0.66□□□□□ -2.52
SSSCA1O60232 AC025647.1-201ENST00000517879 253 ntBASIC-0.66□□□□□ -2.52
SSSCA1O60232 AP001328.1-201ENST00000528550 176 ntBASIC-0.66□□□□□ -2.52
SSSCA1O60232 AC013828.2-201ENST00000532487 235 ntBASIC-0.66□□□□□ -2.52
SSSCA1O60232 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.66□□□□□ -2.52
SSSCA1O60232 MIR4804-201ENST00000581683 73 ntBASIC-0.66□□□□□ -2.52
SSSCA1O60232 AC092574.1-201ENST00000609771 420 ntBASIC-0.66□□□□□ -2.52
SSSCA1O60232 AL355073.2-201ENST00000612106 557 ntBASIC-0.66□□□□□ -2.52
SSSCA1O60232 AC005562.2-201ENST00000618264 111 ntBASIC-0.66□□□□□ -2.52
SSSCA1O60232 uc_338.22-201ENST00000622722 187 ntBASIC-0.66□□□□□ -2.52
SSSCA1O60232 AL008636.1-201ENST00000625038 1018 ntBASIC-0.66□□□□□ -2.52
SSSCA1O60232 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.66□□□□□ -2.52
SSSCA1O60232 MIR892B-201ENST00000401279 77 ntBASIC-0.67□□□□□ -2.52
SSSCA1O60232 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.67□□□□□ -2.52
SSSCA1O60232 AC013470.1-201ENST00000453438 462 ntBASIC-0.67□□□□□ -2.52
SSSCA1O60232 AC107297.1-201ENST00000459991 176 ntBASIC-0.67□□□□□ -2.52
SSSCA1O60232 AC079395.1-201ENST00000510981 262 ntBASIC-0.67□□□□□ -2.52
SSSCA1O60232 RNU6-123P-201ENST00000516163 102 ntBASIC-0.67□□□□□ -2.52
SSSCA1O60232 RNU7-99P-201ENST00000516271 62 ntBASIC-0.67□□□□□ -2.52
SSSCA1O60232 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.67□□□□□ -2.52
SSSCA1O60232 AC133485.4-201ENST00000561835 220 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms