Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 Y_RNA.100-201ENST00000363141 102 ntBASIC1.33□□□□□ -2.2
MSH4O15457 RNU6-534P-201ENST00000364877 106 ntBASIC1.33□□□□□ -2.2
MSH4O15457 RNU4-9P-201ENST00000364951 139 ntBASIC1.33□□□□□ -2.2
MSH4O15457 Y_RNA.414-201ENST00000384011 101 ntBASIC1.33□□□□□ -2.2
MSH4O15457 MIR32-201ENST00000384965 70 ntBASIC1.33□□□□□ -2.2
MSH4O15457 RNU6-57P-201ENST00000411348 103 ntBASIC1.33□□□□□ -2.2
MSH4O15457 Z82188.1-201ENST00000436709 154 ntBASIC1.33□□□□□ -2.2
MSH4O15457 HMGN2P34-201ENST00000437647 269 ntBASIC1.33□□□□□ -2.2
MSH4O15457 RNU7-57P-201ENST00000459540 60 ntBASIC1.33□□□□□ -2.2
MSH4O15457 HMGN1P7-201ENST00000491722 313 ntBASIC1.33□□□□□ -2.2
MSH4O15457 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.33□□□□□ -2.2
MSH4O15457 ACA59.1-201ENST00000515966 143 ntBASIC1.33□□□□□ -2.2
MSH4O15457 RNU6-344P-201ENST00000516635 111 ntBASIC1.33□□□□□ -2.2
MSH4O15457 RNA5SP54-201ENST00000516951 92 ntBASIC1.33□□□□□ -2.2
MSH4O15457 AC090517.2-201ENST00000614966 680 ntBASIC1.33□□□□□ -2.2
MSH4O15457 AC006504.8-201ENST00000621046 635 ntBASIC1.33□□□□□ -2.2
MSH4O15457 AC091895.1-201ENST00000624494 256 ntBASIC1.33□□□□□ -2.2
MSH4O15457 AC008873.1-201ENST00000625051 138 ntBASIC1.33□□□□□ -2.2
MSH4O15457 MIR3688-2-201ENST00000636963 87 ntBASIC1.33□□□□□ -2.2
MSH4O15457 MIR3662-201ENST00000637030 95 ntBASIC1.33□□□□□ -2.2
MSH4O15457 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
MSH4O15457 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
MSH4O15457 ICE2P2-201ENST00000483823 2787 ntBASIC1.32□□□□□ -2.2
MSH4O15457 Y_RNA.135-201ENST00000363439 95 ntBASIC1.32□□□□□ -2.2
MSH4O15457 SNORA33-201ENST00000363664 130 ntBASIC1.32□□□□□ -2.2
MSH4O15457 RNU6-271P-201ENST00000363858 105 ntBASIC1.32□□□□□ -2.2
MSH4O15457 Y_RNA.212-201ENST00000364177 102 ntBASIC1.32□□□□□ -2.2
MSH4O15457 SNORA25.9-201ENST00000365087 128 ntBASIC1.32□□□□□ -2.2
MSH4O15457 MIR499A-201ENST00000384903 122 ntBASIC1.32□□□□□ -2.2
MSH4O15457 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.32□□□□□ -2.2
MSH4O15457 MIR1253-201ENST00000408273 105 ntBASIC1.32□□□□□ -2.2
MSH4O15457 RNU6-1148P-201ENST00000410992 104 ntBASIC1.32□□□□□ -2.2
MSH4O15457 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.32□□□□□ -2.2
MSH4O15457 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.32□□□□□ -2.2
MSH4O15457 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.32□□□□□ -2.2
MSH4O15457 AC011352.1-201ENST00000512300 793 ntBASIC1.32□□□□□ -2.2
MSH4O15457 RNU6-1146P-201ENST00000516282 102 ntBASIC1.32□□□□□ -2.2
MSH4O15457 MIR3942-201ENST00000585264 109 ntBASIC1.32□□□□□ -2.2
MSH4O15457 AC019193.3-201ENST00000609144 554 ntBASIC1.32□□□□□ -2.2
MSH4O15457 AC098679.4-201ENST00000624241 654 ntBASIC1.32□□□□□ -2.2
MSH4O15457 AC095038.3-201ENST00000634439 195 ntBASIC1.32□□□□□ -2.2
MSH4O15457 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
MSH4O15457 SNORA72.2-201ENST00000365028 127 ntBASIC1.31□□□□□ -2.2
MSH4O15457 SNORA67.2-201ENST00000384300 149 ntBASIC1.31□□□□□ -2.2
MSH4O15457 RNU6-417P-201ENST00000384712 107 ntBASIC1.31□□□□□ -2.2
MSH4O15457 RNU6-331P-201ENST00000384724 107 ntBASIC1.31□□□□□ -2.2
MSH4O15457 RNU6-373P-201ENST00000411247 98 ntBASIC1.31□□□□□ -2.2
MSH4O15457 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.31□□□□□ -2.2
MSH4O15457 MTND1P4-201ENST00000435196 415 ntBASIC1.31□□□□□ -2.2
MSH4O15457 AC073910.1-201ENST00000445047 438 ntBASIC1.31□□□□□ -2.2
MSH4O15457 AC245517.4-201ENST00000448601 281 ntBASIC1.31□□□□□ -2.2
MSH4O15457 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.31□□□□□ -2.2
MSH4O15457 snoU13.27-201ENST00000459278 104 ntBASIC1.31□□□□□ -2.2
MSH4O15457 MTND1P5-201ENST00000517906 940 ntBASIC1.31□□□□□ -2.2
MSH4O15457 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.31□□□□□ -2.2
MSH4O15457 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.31□□□□□ -2.2
MSH4O15457 AL160236.1-201ENST00000556317 195 ntBASIC1.31□□□□□ -2.2
MSH4O15457 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.31□□□□□ -2.2
MSH4O15457 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.31□□□□□ -2.2
MSH4O15457 AC080078.3-201ENST00000605407 463 ntBASIC1.31□□□□□ -2.2
MSH4O15457 AC124303.1-201ENST00000605703 360 ntBASIC1.31□□□□□ -2.2
MSH4O15457 SNORD11B-201ENST00000607707 90 ntBASIC1.31□□□□□ -2.2
MSH4O15457 AC007014.2-201ENST00000615581 479 ntBASIC1.31□□□□□ -2.2
MSH4O15457 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
MSH4O15457 Y_RNA.6-201ENST00000362350 114 ntBASIC1.3□□□□□ -2.2
MSH4O15457 SNORD115-8-201ENST00000363856 82 ntBASIC1.3□□□□□ -2.2
MSH4O15457 SNORD115-32-201ENST00000364079 82 ntBASIC1.3□□□□□ -2.2
MSH4O15457 SNORD115-38-201ENST00000365037 82 ntBASIC1.3□□□□□ -2.2
MSH4O15457 Y_RNA.319-201ENST00000365138 92 ntBASIC1.3□□□□□ -2.2
MSH4O15457 RNU6-245P-201ENST00000384020 107 ntBASIC1.3□□□□□ -2.2
MSH4O15457 RNU6-192P-201ENST00000391253 100 ntBASIC1.3□□□□□ -2.2
MSH4O15457 MIR1276-201ENST00000408707 83 ntBASIC1.3□□□□□ -2.2
MSH4O15457 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.3□□□□□ -2.2
MSH4O15457 AC015922.2-201ENST00000435593 184 ntBASIC1.3□□□□□ -2.2
MSH4O15457 MTND1P34-201ENST00000438556 671 ntBASIC1.3□□□□□ -2.2
MSH4O15457 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.3□□□□□ -2.2
MSH4O15457 RPS26P55-201ENST00000471178 356 ntBASIC1.3□□□□□ -2.2
MSH4O15457 AC069439.1-201ENST00000494739 167 ntBASIC1.3□□□□□ -2.2
MSH4O15457 RNU6-1198P-201ENST00000516904 67 ntBASIC1.3□□□□□ -2.2
MSH4O15457 RNU6-58P-201ENST00000517143 103 ntBASIC1.3□□□□□ -2.2
MSH4O15457 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.3□□□□□ -2.2
MSH4O15457 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.3□□□□□ -2.2
MSH4O15457 U4.5-201ENST00000617137 123 ntBASIC1.3□□□□□ -2.2
MSH4O15457 AC009033.1-201ENST00000624279 431 ntBASIC1.3□□□□□ -2.2
MSH4O15457 snoZ196.1-201ENST00000625269 89 ntBASIC1.3□□□□□ -2.2
MSH4O15457 MIR302D-201ENST00000362275 68 ntBASIC1.29□□□□□ -2.2
MSH4O15457 SNORA4.2-201ENST00000365313 147 ntBASIC1.29□□□□□ -2.2
MSH4O15457 SNORD116-11-201ENST00000383882 92 ntBASIC1.29□□□□□ -2.2
MSH4O15457 RNU6-306P-201ENST00000384617 107 ntBASIC1.29□□□□□ -2.2
MSH4O15457 MIR515-2-201ENST00000384883 83 ntBASIC1.29□□□□□ -2.2
MSH4O15457 MIR515-1-201ENST00000384884 83 ntBASIC1.29□□□□□ -2.2
MSH4O15457 MIR153-2-201ENST00000385225 87 ntBASIC1.29□□□□□ -2.2
MSH4O15457 RNA5SP504-201ENST00000410676 117 ntBASIC1.29□□□□□ -2.2
MSH4O15457 COX6CP10-201ENST00000416832 224 ntBASIC1.29□□□□□ -2.2
MSH4O15457 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.29□□□□□ -2.2
MSH4O15457 AL445305.1-201ENST00000432577 575 ntBASIC1.29□□□□□ -2.2
MSH4O15457 RPS29P25-201ENST00000481709 171 ntBASIC1.29□□□□□ -2.2
MSH4O15457 RNA5SP445-201ENST00000515889 115 ntBASIC1.29□□□□□ -2.2
MSH4O15457 SNORA25.14-201ENST00000516481 132 ntBASIC1.29□□□□□ -2.2
MSH4O15457 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms