Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 RNU6-392P-201ENST00000364926 101 ntBASIC1.71□□□□□ -2.14
CDX4O14627 Y_RNA.314-201ENST00000365114 102 ntBASIC1.71□□□□□ -2.14
CDX4O14627 Y_RNA.327-201ENST00000365201 102 ntBASIC1.71□□□□□ -2.14
CDX4O14627 SNORA33.2-201ENST00000365413 134 ntBASIC1.71□□□□□ -2.14
CDX4O14627 RNA5SP37-201ENST00000365420 130 ntBASIC1.71□□□□□ -2.14
CDX4O14627 RNU6-1286P-201ENST00000383871 107 ntBASIC1.71□□□□□ -2.14
CDX4O14627 Y_RNA.405-201ENST00000383979 100 ntBASIC1.71□□□□□ -2.14
CDX4O14627 Y_RNA.451-201ENST00000384200 100 ntBASIC1.71□□□□□ -2.14
CDX4O14627 RNU4-52P-201ENST00000384209 138 ntBASIC1.71□□□□□ -2.14
CDX4O14627 Y_RNA.524-201ENST00000384564 100 ntBASIC1.71□□□□□ -2.14
CDX4O14627 Y_RNA.561-201ENST00000384694 100 ntBASIC1.71□□□□□ -2.14
CDX4O14627 Y_RNA.577-201ENST00000384794 101 ntBASIC1.71□□□□□ -2.14
CDX4O14627 MTCYBP2-201ENST00000407745 171 ntBASIC1.71□□□□□ -2.14
CDX4O14627 AC004965.1-201ENST00000413033 213 ntBASIC1.71□□□□□ -2.14
CDX4O14627 MCFD2P1-201ENST00000417812 300 ntBASIC1.71□□□□□ -2.14
CDX4O14627 WARS2P1-201ENST00000429678 537 ntBASIC1.71□□□□□ -2.14
CDX4O14627 AC092423.1-201ENST00000430165 186 ntBASIC1.71□□□□□ -2.14
CDX4O14627 CHEK2P4-201ENST00000450340 246 ntBASIC1.71□□□□□ -2.14
CDX4O14627 RNU7-169P-201ENST00000459456 61 ntBASIC1.71□□□□□ -2.14
CDX4O14627 AC025033.1-201ENST00000463883 194 ntBASIC1.71□□□□□ -2.14
CDX4O14627 AC107032.1-201ENST00000485945 480 ntBASIC1.71□□□□□ -2.14
CDX4O14627 AC018868.1-201ENST00000491307 315 ntBASIC1.71□□□□□ -2.14
CDX4O14627 AC021146.2-201ENST00000504736 556 ntBASIC1.71□□□□□ -2.14
CDX4O14627 SNORA31.16-201ENST00000516773 139 ntBASIC1.71□□□□□ -2.14
CDX4O14627 RNU6-988P-201ENST00000519081 107 ntBASIC1.71□□□□□ -2.14
CDX4O14627 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.71□□□□□ -2.14
CDX4O14627 AL590705.4-201ENST00000532209 134 ntBASIC1.71□□□□□ -2.14
CDX4O14627 Z98751.3-201ENST00000604447 521 ntBASIC1.71□□□□□ -2.14
CDX4O14627 RPL17P51-201ENST00000605218 238 ntBASIC1.71□□□□□ -2.14
CDX4O14627 MIR6504-201ENST00000613520 61 ntBASIC1.71□□□□□ -2.14
CDX4O14627 AC083806.3-201ENST00000614016 455 ntBASIC1.71□□□□□ -2.14
CDX4O14627 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
CDX4O14627 AL391987.6-201ENST00000305671 199 ntBASIC1.7□□□□□ -2.14
CDX4O14627 Y_RNA.162-201ENST00000363683 102 ntBASIC1.7□□□□□ -2.14
CDX4O14627 RNU6-944P-201ENST00000364023 107 ntBASIC1.7□□□□□ -2.14
CDX4O14627 SNORA12.2-201ENST00000391040 156 ntBASIC1.7□□□□□ -2.14
CDX4O14627 SNORA46.1-201ENST00000391069 153 ntBASIC1.7□□□□□ -2.14
CDX4O14627 AC012306.1-201ENST00000423267 114 ntBASIC1.7□□□□□ -2.14
CDX4O14627 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.7□□□□□ -2.14
CDX4O14627 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.7□□□□□ -2.14
CDX4O14627 AL137159.1-201ENST00000452808 512 ntBASIC1.7□□□□□ -2.14
CDX4O14627 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.7□□□□□ -2.14
CDX4O14627 snoU13.6-201ENST00000458785 104 ntBASIC1.7□□□□□ -2.14
CDX4O14627 TOMM22P6-201ENST00000465035 409 ntBASIC1.7□□□□□ -2.14
CDX4O14627 RPS27P21-201ENST00000486977 252 ntBASIC1.7□□□□□ -2.14
CDX4O14627 RPL30P10-201ENST00000488148 337 ntBASIC1.7□□□□□ -2.14
CDX4O14627 AC079804.2-201ENST00000490376 200 ntBASIC1.7□□□□□ -2.14
CDX4O14627 AF186996.7-201ENST00000492781 209 ntBASIC1.7□□□□□ -2.14
CDX4O14627 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.7□□□□□ -2.14
CDX4O14627 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.7□□□□□ -2.14
CDX4O14627 RNU6-1137P-201ENST00000517073 99 ntBASIC1.7□□□□□ -2.14
CDX4O14627 RNU2-19P-201ENST00000517288 84 ntBASIC1.7□□□□□ -2.14
CDX4O14627 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.7□□□□□ -2.14
CDX4O14627 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.7□□□□□ -2.14
CDX4O14627 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.7□□□□□ -2.14
CDX4O14627 AC004584.2-201ENST00000570407 410 ntBASIC1.7□□□□□ -2.14
CDX4O14627 MIR4529-201ENST00000578110 78 ntBASIC1.7□□□□□ -2.14
CDX4O14627 AC002984.1-201ENST00000591692 448 ntBASIC1.7□□□□□ -2.14
CDX4O14627 AL078605.1-201ENST00000603529 500 ntBASIC1.7□□□□□ -2.14
CDX4O14627 AL355802.3-201ENST00000607571 545 ntBASIC1.7□□□□□ -2.14
CDX4O14627 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.7□□□□□ -2.14
CDX4O14627 ZNF720P1-201ENST00000562403 1939 ntBASIC1.7□□□□□ -2.14
CDX4O14627 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.7□□□□□ -2.14
CDX4O14627 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.69□□□□□ -2.14
CDX4O14627 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CDX4O14627 AC009487.4-201ENST00000624969 3585 ntBASIC1.69□□□□□ -2.14
CDX4O14627 SNORD32B-201ENST00000364460 84 ntBASIC1.69□□□□□ -2.14
CDX4O14627 RNU4-9P-201ENST00000364951 139 ntBASIC1.69□□□□□ -2.14
CDX4O14627 Y_RNA.364-201ENST00000365532 101 ntBASIC1.69□□□□□ -2.14
CDX4O14627 MIR606-201ENST00000384851 96 ntBASIC1.69□□□□□ -2.14
CDX4O14627 MIR32-201ENST00000384965 70 ntBASIC1.69□□□□□ -2.14
CDX4O14627 MIR487A-201ENST00000385009 80 ntBASIC1.69□□□□□ -2.14
CDX4O14627 RNU6-700P-201ENST00000391043 107 ntBASIC1.69□□□□□ -2.14
CDX4O14627 AL357139.1-201ENST00000407792 426 ntBASIC1.69□□□□□ -2.14
CDX4O14627 SRIP3-201ENST00000413200 219 ntBASIC1.69□□□□□ -2.14
CDX4O14627 MTCYBP10-201ENST00000424905 650 ntBASIC1.69□□□□□ -2.14
CDX4O14627 AC099799.1-201ENST00000439809 192 ntBASIC1.69□□□□□ -2.14
CDX4O14627 AC087477.1-201ENST00000465747 340 ntBASIC1.69□□□□□ -2.14
CDX4O14627 RNU7-175P-201ENST00000515915 61 ntBASIC1.69□□□□□ -2.14
CDX4O14627 RNU4-77P-201ENST00000516692 156 ntBASIC1.69□□□□□ -2.14
CDX4O14627 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.69□□□□□ -2.14
CDX4O14627 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.69□□□□□ -2.14
CDX4O14627 EIF4A1P12-201ENST00000551910 141 ntBASIC1.69□□□□□ -2.14
CDX4O14627 MIR4287-201ENST00000579398 78 ntBASIC1.69□□□□□ -2.14
CDX4O14627 AL031274.2-201ENST00000599419 203 ntBASIC1.69□□□□□ -2.14
CDX4O14627 AL360085.1-201ENST00000604713 532 ntBASIC1.69□□□□□ -2.14
CDX4O14627 AC087588.2-201ENST00000617667 426 ntBASIC1.69□□□□□ -2.14
CDX4O14627 AC137590.2-201ENST00000619709 240 ntBASIC1.69□□□□□ -2.14
CDX4O14627 AC091812.1-201ENST00000432235 1948 ntBASIC1.69□□□□□ -2.14
CDX4O14627 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CDX4O14627 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.68□□□□□ -2.14
CDX4O14627 RNU5B-2P-201ENST00000363036 113 ntBASIC1.68□□□□□ -2.14
CDX4O14627 SNORA63C-201ENST00000364578 129 ntBASIC1.68□□□□□ -2.14
CDX4O14627 RNU6-26P-201ENST00000383985 107 ntBASIC1.68□□□□□ -2.14
CDX4O14627 MIR29C-201ENST00000385231 88 ntBASIC1.68□□□□□ -2.14
CDX4O14627 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CDX4O14627 MIR208B-201ENST00000401172 77 ntBASIC1.68□□□□□ -2.14
CDX4O14627 MRPL42P3-201ENST00000401492 326 ntBASIC1.68□□□□□ -2.14
CDX4O14627 RNA5SP201-201ENST00000410316 124 ntBASIC1.68□□□□□ -2.14
CDX4O14627 Y_RNA.605-201ENST00000410577 105 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms