Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AL359821.1-201ENST00000605519 182 ntBASIC0.64□□□□□ -2.31
UPK2O00526 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.64□□□□□ -2.31
UPK2O00526 U6.73-201ENST00000619194 103 ntBASIC0.64□□□□□ -2.31
UPK2O00526 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
UPK2O00526 AC008163.1-202ENST00000636004 2889 ntBASIC0.63□□□□□ -2.31
UPK2O00526 RNU6-82P-201ENST00000363970 107 ntBASIC0.63□□□□□ -2.31
UPK2O00526 RNU6-969P-201ENST00000383900 105 ntBASIC0.63□□□□□ -2.31
UPK2O00526 Y_RNA.415-201ENST00000384012 112 ntBASIC0.63□□□□□ -2.31
UPK2O00526 RNU6-933P-201ENST00000384424 107 ntBASIC0.63□□□□□ -2.31
UPK2O00526 MIR32-201ENST00000384965 70 ntBASIC0.63□□□□□ -2.31
UPK2O00526 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
UPK2O00526 RNU11-5P-201ENST00000391216 129 ntBASIC0.63□□□□□ -2.31
UPK2O00526 AL590002.1-201ENST00000406554 418 ntBASIC0.63□□□□□ -2.31
UPK2O00526 AL606490.4-201ENST00000423117 127 ntBASIC0.63□□□□□ -2.31
UPK2O00526 CALM2P4-201ENST00000430810 426 ntBASIC0.63□□□□□ -2.31
UPK2O00526 AC093850.1-201ENST00000454121 251 ntBASIC0.63□□□□□ -2.31
UPK2O00526 MTCO1P29-201ENST00000496868 288 ntBASIC0.63□□□□□ -2.31
UPK2O00526 RNU7-99P-201ENST00000516271 62 ntBASIC0.63□□□□□ -2.31
UPK2O00526 RNU6-917P-201ENST00000516294 104 ntBASIC0.63□□□□□ -2.31
UPK2O00526 SNORA25.14-201ENST00000516481 132 ntBASIC0.63□□□□□ -2.31
UPK2O00526 AL137100.2-201ENST00000555786 315 ntBASIC0.63□□□□□ -2.31
UPK2O00526 AC022432.1-201ENST00000595739 310 ntBASIC0.63□□□□□ -2.31
UPK2O00526 AC092807.2-201ENST00000609367 243 ntBASIC0.63□□□□□ -2.31
UPK2O00526 AC073114.1-201ENST00000612027 490 ntBASIC0.63□□□□□ -2.31
UPK2O00526 AC023934.1-201ENST00000574529 2389 ntBASIC0.63□□□□□ -2.31
UPK2O00526 Y_RNA.1-201ENST00000352915 104 ntBASIC0.62□□□□□ -2.31
UPK2O00526 RNU6-199P-201ENST00000362954 107 ntBASIC0.62□□□□□ -2.31
UPK2O00526 RNU6-214P-201ENST00000384130 107 ntBASIC0.62□□□□□ -2.31
UPK2O00526 RNU6-1103P-201ENST00000384150 107 ntBASIC0.62□□□□□ -2.31
UPK2O00526 MIR146A-201ENST00000385201 99 ntBASIC0.62□□□□□ -2.31
UPK2O00526 MIR942-201ENST00000401111 86 ntBASIC0.62□□□□□ -2.31
UPK2O00526 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.62□□□□□ -2.31
UPK2O00526 MIR1185-2-201ENST00000408687 86 ntBASIC0.62□□□□□ -2.31
UPK2O00526 RPS3AP1-201ENST00000413190 320 ntBASIC0.62□□□□□ -2.31
UPK2O00526 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.62□□□□□ -2.31
UPK2O00526 RPS26P48-201ENST00000491713 339 ntBASIC0.62□□□□□ -2.31
UPK2O00526 HMGN1P7-201ENST00000491722 313 ntBASIC0.62□□□□□ -2.31
UPK2O00526 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.62□□□□□ -2.31
UPK2O00526 AC016957.1-201ENST00000534895 309 ntBASIC0.62□□□□□ -2.31
UPK2O00526 MIR3973-201ENST00000579824 107 ntBASIC0.62□□□□□ -2.31
UPK2O00526 AC068790.6-201ENST00000602558 258 ntBASIC0.62□□□□□ -2.31
UPK2O00526 AC073648.5-201ENST00000603502 305 ntBASIC0.62□□□□□ -2.31
UPK2O00526 MIR6866-201ENST00000638146 69 ntBASIC0.62□□□□□ -2.31
UPK2O00526 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.62□□□□□ -2.31
UPK2O00526 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
UPK2O00526 SNORD50.1-201ENST00000362987 71 ntBASIC0.61□□□□□ -2.31
UPK2O00526 MIR608-201ENST00000384820 100 ntBASIC0.61□□□□□ -2.31
UPK2O00526 MIR653-201ENST00000385279 96 ntBASIC0.61□□□□□ -2.31
UPK2O00526 SNORD12-201ENST00000391002 90 ntBASIC0.61□□□□□ -2.31
UPK2O00526 Y_RNA.595-201ENST00000410403 105 ntBASIC0.61□□□□□ -2.31
UPK2O00526 RNU2-64P-201ENST00000411315 191 ntBASIC0.61□□□□□ -2.31
UPK2O00526 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.61□□□□□ -2.31
UPK2O00526 Y_RNA.654-201ENST00000497848 106 ntBASIC0.61□□□□□ -2.31
UPK2O00526 AC091133.4-201ENST00000511142 308 ntBASIC0.61□□□□□ -2.31
UPK2O00526 RNU6-113P-201ENST00000516653 101 ntBASIC0.61□□□□□ -2.31
UPK2O00526 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.61□□□□□ -2.31
UPK2O00526 AC023157.2-201ENST00000540596 141 ntBASIC0.61□□□□□ -2.31
UPK2O00526 AC090049.2-201ENST00000550377 109 ntBASIC0.61□□□□□ -2.31
UPK2O00526 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.61□□□□□ -2.31
UPK2O00526 MIR4769-201ENST00000584126 77 ntBASIC0.61□□□□□ -2.31
UPK2O00526 FAM157A-202ENST00000615155 405 ntBASIC0.61□□□□□ -2.31
UPK2O00526 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
UPK2O00526 MTND4P12-201ENST00000498999 1377 ntBASIC0.6□□□□□ -2.31
UPK2O00526 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.6□□□□□ -2.31
UPK2O00526 RNU6-1266P-201ENST00000362794 105 ntBASIC0.6□□□□□ -2.31
UPK2O00526 Y_RNA.100-201ENST00000363141 102 ntBASIC0.6□□□□□ -2.31
UPK2O00526 Y_RNA.167-201ENST00000363735 109 ntBASIC0.6□□□□□ -2.31
UPK2O00526 SNORD114-27-201ENST00000363766 70 ntBASIC0.6□□□□□ -2.31
UPK2O00526 RNU6-873P-201ENST00000363833 107 ntBASIC0.6□□□□□ -2.31
UPK2O00526 Y_RNA.296-201ENST00000364930 108 ntBASIC0.6□□□□□ -2.31
UPK2O00526 SNORA75-201ENST00000384158 137 ntBASIC0.6□□□□□ -2.31
UPK2O00526 U8.16-201ENST00000391279 133 ntBASIC0.6□□□□□ -2.31
UPK2O00526 AL451046.2-201ENST00000403074 277 ntBASIC0.6□□□□□ -2.31
UPK2O00526 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.6□□□□□ -2.31
UPK2O00526 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.6□□□□□ -2.31
UPK2O00526 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.6□□□□□ -2.31
UPK2O00526 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.6□□□□□ -2.31
UPK2O00526 AC079354.2-201ENST00000453523 154 ntBASIC0.6□□□□□ -2.31
UPK2O00526 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.6□□□□□ -2.31
UPK2O00526 RNU7-187P-201ENST00000458985 68 ntBASIC0.6□□□□□ -2.31
UPK2O00526 RPS3AP17-201ENST00000472594 777 ntBASIC0.6□□□□□ -2.31
UPK2O00526 RNA5SP54-201ENST00000516951 92 ntBASIC0.6□□□□□ -2.31
UPK2O00526 RNU6-58P-201ENST00000517143 103 ntBASIC0.6□□□□□ -2.31
UPK2O00526 LRRC34P1-201ENST00000542742 915 ntBASIC0.6□□□□□ -2.31
UPK2O00526 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.6□□□□□ -2.31
UPK2O00526 MIR4438-201ENST00000585271 93 ntBASIC0.6□□□□□ -2.31
UPK2O00526 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.6□□□□□ -2.31
UPK2O00526 AL133215.3-201ENST00000609801 448 ntBASIC0.6□□□□□ -2.31
UPK2O00526 AC106800.4-201ENST00000614905 153 ntBASIC0.6□□□□□ -2.31
UPK2O00526 RNA5SP361-201ENST00000362686 118 ntBASIC0.59□□□□□ -2.31
UPK2O00526 U3.8-201ENST00000363675 217 ntBASIC0.59□□□□□ -2.31
UPK2O00526 Y_RNA.409-201ENST00000383990 98 ntBASIC0.59□□□□□ -2.31
UPK2O00526 RNU6-245P-201ENST00000384020 107 ntBASIC0.59□□□□□ -2.31
UPK2O00526 SNORA80D-201ENST00000384488 135 ntBASIC0.59□□□□□ -2.31
UPK2O00526 RPS26P5-201ENST00000418544 335 ntBASIC0.59□□□□□ -2.31
UPK2O00526 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.59□□□□□ -2.31
UPK2O00526 RNU6-1208P-201ENST00000459588 107 ntBASIC0.59□□□□□ -2.31
UPK2O00526 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.59□□□□□ -2.31
UPK2O00526 TRMT112P2-201ENST00000512910 132 ntBASIC0.59□□□□□ -2.31
UPK2O00526 Y_RNA.695-201ENST00000516715 107 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms