Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 Y_RNA.256-201ENST00000364594 104 ntBASIC1.42□□□□□ -2.18
DDX39AO00148 MIR517A-201ENST00000385001 87 ntBASIC1.42□□□□□ -2.18
DDX39AO00148 RNA5SP504-201ENST00000410676 117 ntBASIC1.42□□□□□ -2.18
DDX39AO00148 AL590632.1-201ENST00000424289 371 ntBASIC1.42□□□□□ -2.18
DDX39AO00148 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.42□□□□□ -2.18
DDX39AO00148 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.42□□□□□ -2.18
DDX39AO00148 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.42□□□□□ -2.18
DDX39AO00148 MTND1P11-201ENST00000456661 876 ntBASIC1.42□□□□□ -2.18
DDX39AO00148 AL163195.1-201ENST00000496941 348 ntBASIC1.42□□□□□ -2.18
DDX39AO00148 RNU1-142P-201ENST00000516682 145 ntBASIC1.42□□□□□ -2.18
DDX39AO00148 RAB11AP2-201ENST00000545905 639 ntBASIC1.42□□□□□ -2.18
DDX39AO00148 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.42□□□□□ -2.18
DDX39AO00148 MIR6078-201ENST00000611069 100 ntBASIC1.42□□□□□ -2.18
DDX39AO00148 AL359075.3-201ENST00000613288 217 ntBASIC1.42□□□□□ -2.18
DDX39AO00148 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
DDX39AO00148 RNU6-1123P-201ENST00000362347 106 ntBASIC1.41□□□□□ -2.18
DDX39AO00148 RNU6-451P-201ENST00000362921 107 ntBASIC1.41□□□□□ -2.18
DDX39AO00148 RNY3P3-201ENST00000363816 102 ntBASIC1.41□□□□□ -2.18
DDX39AO00148 RNA5SP109-201ENST00000391010 116 ntBASIC1.41□□□□□ -2.18
DDX39AO00148 RPL21P1-201ENST00000399532 476 ntBASIC1.41□□□□□ -2.18
DDX39AO00148 Z82188.1-201ENST00000436709 154 ntBASIC1.41□□□□□ -2.18
DDX39AO00148 RNU7-66P-201ENST00000459469 62 ntBASIC1.41□□□□□ -2.18
DDX39AO00148 SNORA25.14-201ENST00000516481 132 ntBASIC1.41□□□□□ -2.18
DDX39AO00148 RNU6-256P-201ENST00000516747 97 ntBASIC1.41□□□□□ -2.18
DDX39AO00148 RNU6-58P-201ENST00000517143 103 ntBASIC1.41□□□□□ -2.18
DDX39AO00148 AC024909.2-201ENST00000553035 286 ntBASIC1.41□□□□□ -2.18
DDX39AO00148 AL442163.3-201ENST00000554110 156 ntBASIC1.41□□□□□ -2.18
DDX39AO00148 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.41□□□□□ -2.18
DDX39AO00148 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.41□□□□□ -2.18
DDX39AO00148 AL365434.2-201ENST00000607979 234 ntBASIC1.41□□□□□ -2.18
DDX39AO00148 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.4□□□□□ -2.18
DDX39AO00148 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
DDX39AO00148 MIR337-201ENST00000362281 93 ntBASIC1.4□□□□□ -2.19
DDX39AO00148 RNY1P10-201ENST00000363268 113 ntBASIC1.4□□□□□ -2.19
DDX39AO00148 RNA5SP259-201ENST00000365541 109 ntBASIC1.4□□□□□ -2.19
DDX39AO00148 RNU6-541P-201ENST00000384709 110 ntBASIC1.4□□□□□ -2.19
DDX39AO00148 MIR758-201ENST00000390227 88 ntBASIC1.4□□□□□ -2.19
DDX39AO00148 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.4□□□□□ -2.19
DDX39AO00148 ZNF885P-201ENST00000420174 1098 ntBASIC1.4□□□□□ -2.19
DDX39AO00148 AC093852.1-201ENST00000503587 266 ntBASIC1.4□□□□□ -2.19
DDX39AO00148 AC103851.1-201ENST00000506833 274 ntBASIC1.4□□□□□ -2.19
DDX39AO00148 RNA5SP454-201ENST00000517231 127 ntBASIC1.4□□□□□ -2.19
DDX39AO00148 AC019288.1-201ENST00000557918 224 ntBASIC1.4□□□□□ -2.19
DDX39AO00148 MIR4742-201ENST00000581069 85 ntBASIC1.4□□□□□ -2.19
DDX39AO00148 AL929325.1-201ENST00000603096 117 ntBASIC1.4□□□□□ -2.19
DDX39AO00148 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.4□□□□□ -2.19
DDX39AO00148 MIR1321-201ENST00000637766 79 ntBASIC1.4□□□□□ -2.19
DDX39AO00148 RNU6-1266P-201ENST00000362794 105 ntBASIC1.39□□□□□ -2.19
DDX39AO00148 Y_RNA.100-201ENST00000363141 102 ntBASIC1.39□□□□□ -2.19
DDX39AO00148 RNU6-137P-201ENST00000363680 108 ntBASIC1.39□□□□□ -2.19
DDX39AO00148 RNU6-392P-201ENST00000364926 101 ntBASIC1.39□□□□□ -2.19
DDX39AO00148 NDUFB4P10-201ENST00000452541 359 ntBASIC1.39□□□□□ -2.19
DDX39AO00148 RPL31P58-201ENST00000469001 379 ntBASIC1.39□□□□□ -2.19
DDX39AO00148 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.39□□□□□ -2.19
DDX39AO00148 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.39□□□□□ -2.19
DDX39AO00148 CYP3A52P-201ENST00000563326 91 ntBASIC1.39□□□□□ -2.19
DDX39AO00148 AC019193.3-201ENST00000609144 554 ntBASIC1.39□□□□□ -2.19
DDX39AO00148 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.39□□□□□ -2.19
DDX39AO00148 Y_RNA.135-201ENST00000363439 95 ntBASIC1.38□□□□□ -2.19
DDX39AO00148 U3.8-201ENST00000363675 217 ntBASIC1.38□□□□□ -2.19
DDX39AO00148 RNU5F-3P-201ENST00000363767 117 ntBASIC1.38□□□□□ -2.19
DDX39AO00148 RNU6-873P-201ENST00000363833 107 ntBASIC1.38□□□□□ -2.19
DDX39AO00148 Z83846.1-201ENST00000446798 265 ntBASIC1.38□□□□□ -2.19
DDX39AO00148 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.38□□□□□ -2.19
DDX39AO00148 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.38□□□□□ -2.19
DDX39AO00148 AL512310.8-201ENST00000550183 120 ntBASIC1.38□□□□□ -2.19
DDX39AO00148 AC027288.2-201ENST00000553028 243 ntBASIC1.38□□□□□ -2.19
DDX39AO00148 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.38□□□□□ -2.19
DDX39AO00148 7SK.7-201ENST00000603504 247 ntBASIC1.38□□□□□ -2.19
DDX39AO00148 AC080078.3-201ENST00000605407 463 ntBASIC1.38□□□□□ -2.19
DDX39AO00148 AC124303.1-201ENST00000605703 360 ntBASIC1.38□□□□□ -2.19
DDX39AO00148 AL355802.3-201ENST00000607571 545 ntBASIC1.38□□□□□ -2.19
DDX39AO00148 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
DDX39AO00148 Y_RNA.38-201ENST00000362617 102 ntBASIC1.37□□□□□ -2.19
DDX39AO00148 Y_RNA.238-201ENST00000364441 102 ntBASIC1.37□□□□□ -2.19
DDX39AO00148 SNORD87-201ENST00000364849 89 ntBASIC1.37□□□□□ -2.19
DDX39AO00148 Y_RNA.414-201ENST00000384011 101 ntBASIC1.37□□□□□ -2.19
DDX39AO00148 MTND2P22-201ENST00000444325 1033 ntBASIC1.37□□□□□ -2.19
DDX39AO00148 RPS27P1-201ENST00000450552 247 ntBASIC1.37□□□□□ -2.19
DDX39AO00148 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.37□□□□□ -2.19
DDX39AO00148 HMGN1P7-201ENST00000491722 313 ntBASIC1.37□□□□□ -2.19
DDX39AO00148 RNU6-506P-201ENST00000516553 94 ntBASIC1.37□□□□□ -2.19
DDX39AO00148 RNU6-314P-201ENST00000516574 104 ntBASIC1.37□□□□□ -2.19
DDX39AO00148 AL137100.2-201ENST00000555786 315 ntBASIC1.37□□□□□ -2.19
DDX39AO00148 AC245505.1-201ENST00000556398 224 ntBASIC1.37□□□□□ -2.19
DDX39AO00148 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.37□□□□□ -2.19
DDX39AO00148 AC073413.2-201ENST00000604332 360 ntBASIC1.37□□□□□ -2.19
DDX39AO00148 AC103591.3-201ENST00000608684 209 ntBASIC1.37□□□□□ -2.19
DDX39AO00148 AC021506.2-201ENST00000612354 169 ntBASIC1.37□□□□□ -2.19
DDX39AO00148 MIR8070-201ENST00000616510 88 ntBASIC1.37□□□□□ -2.19
DDX39AO00148 MTND4P12-201ENST00000498999 1377 ntBASIC1.36□□□□□ -2.19
DDX39AO00148 RNU6-280P-201ENST00000364145 104 ntBASIC1.36□□□□□ -2.19
DDX39AO00148 Y_RNA.212-201ENST00000364177 102 ntBASIC1.36□□□□□ -2.19
DDX39AO00148 SNORA25.8-201ENST00000364831 128 ntBASIC1.36□□□□□ -2.19
DDX39AO00148 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.36□□□□□ -2.19
DDX39AO00148 RNU6-332P-201ENST00000391193 108 ntBASIC1.36□□□□□ -2.19
DDX39AO00148 MIR1185-2-201ENST00000408687 86 ntBASIC1.36□□□□□ -2.19
DDX39AO00148 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.36□□□□□ -2.19
DDX39AO00148 AC010154.1-201ENST00000425857 269 ntBASIC1.36□□□□□ -2.19
DDX39AO00148 AL445305.1-201ENST00000432577 575 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms