Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL121579.1-201ENST00000555129 305 ntBASIC1.7□□□□□ -2.14
NPIPA3F8WFD2 SUB1P4-201ENST00000566062 339 ntBASIC1.7□□□□□ -2.14
NPIPA3F8WFD2 AC005899.2-201ENST00000584353 90 ntBASIC1.7□□□□□ -2.14
NPIPA3F8WFD2 MZT1P2-201ENST00000604387 248 ntBASIC1.7□□□□□ -2.14
NPIPA3F8WFD2 AC012493.3-201ENST00000604494 112 ntBASIC1.7□□□□□ -2.14
NPIPA3F8WFD2 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.7□□□□□ -2.14
NPIPA3F8WFD2 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.7□□□□□ -2.14
NPIPA3F8WFD2 AC010999.1-201ENST00000611856 324 ntBASIC1.7□□□□□ -2.14
NPIPA3F8WFD2 AC126177.8-201ENST00000618339 1015 ntBASIC1.7□□□□□ -2.14
NPIPA3F8WFD2 AC068205.3-201ENST00000636385 468 ntBASIC1.7□□□□□ -2.14
NPIPA3F8WFD2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.7□□□□□ -2.14
NPIPA3F8WFD2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
NPIPA3F8WFD2 SNORA72.1-201ENST00000363485 129 ntBASIC1.69□□□□□ -2.14
NPIPA3F8WFD2 RNU1-96P-201ENST00000364163 162 ntBASIC1.69□□□□□ -2.14
NPIPA3F8WFD2 MIR548B-201ENST00000385247 97 ntBASIC1.69□□□□□ -2.14
NPIPA3F8WFD2 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.69□□□□□ -2.14
NPIPA3F8WFD2 MTCYBP10-201ENST00000424905 650 ntBASIC1.69□□□□□ -2.14
NPIPA3F8WFD2 AC092423.1-201ENST00000430165 186 ntBASIC1.69□□□□□ -2.14
NPIPA3F8WFD2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
NPIPA3F8WFD2 RNU6-307P-201ENST00000516743 106 ntBASIC1.69□□□□□ -2.14
NPIPA3F8WFD2 AC105029.1-201ENST00000520250 669 ntBASIC1.69□□□□□ -2.14
NPIPA3F8WFD2 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.69□□□□□ -2.14
NPIPA3F8WFD2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.69□□□□□ -2.14
NPIPA3F8WFD2 AC092794.2-201ENST00000620933 563 ntBASIC1.69□□□□□ -2.14
NPIPA3F8WFD2 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.69□□□□□ -2.14
NPIPA3F8WFD2 AC008873.1-201ENST00000625051 138 ntBASIC1.69□□□□□ -2.14
NPIPA3F8WFD2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
NPIPA3F8WFD2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 WWP1P1-201ENST00000466609 2769 ntBASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 Y_RNA.142-201ENST00000363491 102 ntBASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 RNU5F-3P-201ENST00000363767 117 ntBASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 RNU6-281P-201ENST00000384212 103 ntBASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 RNA5SP338-201ENST00000410495 85 ntBASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 AC009310.1-201ENST00000414414 451 ntBASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 RPL31P63-201ENST00000422565 375 ntBASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 AC010409.1-201ENST00000487382 476 ntBASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 RNU6-1114P-201ENST00000516022 107 ntBASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 AC093023.1-201ENST00000547375 507 ntBASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 AC022254.1-201ENST00000567857 235 ntBASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 MIR4713-201ENST00000582691 75 ntBASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 MIR4801-201ENST00000582704 82 ntBASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 MIR5690-201ENST00000583739 73 ntBASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 UBE2V2P2-201ENST00000587677 504 ntBASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 snoZ196.1-201ENST00000625269 89 ntBASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 AP000553.5-201ENST00000641933 54 ntBASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
NPIPA3F8WFD2 RNU6-874P-201ENST00000362390 105 ntBASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 Y_RNA.303-201ENST00000364998 94 ntBASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 Y_RNA.364-201ENST00000365532 101 ntBASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 Y_RNA.646-201ENST00000410980 101 ntBASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 AC007098.1-201ENST00000420122 367 ntBASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 RPL17P19-201ENST00000489069 552 ntBASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 AC093303.1-201ENST00000514549 295 ntBASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 RNU6-120P-201ENST00000516077 103 ntBASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 RNU6-559P-201ENST00000516151 98 ntBASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 SNORA25.15-201ENST00000516487 89 ntBASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 SNORA31.17-201ENST00000516953 127 ntBASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 APOOP3-201ENST00000536787 586 ntBASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 AK6P2-201ENST00000549020 471 ntBASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 AC010900.2-201ENST00000604508 210 ntBASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 AC113139.1-201ENST00000605049 239 ntBASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 MIR1244-1-201ENST00000612829 85 ntBASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 AC084768.2-201ENST00000622736 221 ntBASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 MIR1244-3-201ENST00000635744 85 ntBASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 MIR1244-2-201ENST00000636449 85 ntBASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 MIR1244-4-202ENST00000636813 85 ntBASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.67□□□□□ -2.14
NPIPA3F8WFD2 MTND5P35-201ENST00000557537 1720 ntBASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 RNU6-112P-201ENST00000363599 104 ntBASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 U3.8-201ENST00000363675 217 ntBASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 RNU6-1188P-201ENST00000363795 107 ntBASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 RNU6-99P-201ENST00000364721 107 ntBASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 Y_RNA.358-201ENST00000365491 99 ntBASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 Y_RNA.474-201ENST00000384341 102 ntBASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 RNU6-310P-201ENST00000384655 107 ntBASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 Y_RNA.557-201ENST00000384680 107 ntBASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 RNU1-139P-201ENST00000391307 165 ntBASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 AL117342.1-201ENST00000404861 406 ntBASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 MIR1253-201ENST00000408273 105 ntBASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 HMGN2P34-201ENST00000437647 269 ntBASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 AL603825.1-201ENST00000438481 80 ntBASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 RNU6-107P-201ENST00000516643 102 ntBASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 GNAI2P1-201ENST00000541815 315 ntBASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 AC004584.2-201ENST00000570407 410 ntBASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 AC090617.3-201ENST00000573670 475 ntBASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 MIR3935-201ENST00000583472 104 ntBASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 AC069114.2-201ENST00000604699 304 ntBASIC1.66□□□□□ -2.14
NPIPA3F8WFD2 MIR8081-201ENST00000611533 95 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms