Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 Y_RNA.265-201ENST00000364677 108 ntBASIC-1.09□□□□□ -2.58
TRAV21A0A0B4J279 RNU6-384P-201ENST00000364900 104 ntBASIC-1.09□□□□□ -2.58
TRAV21A0A0B4J279 RNU6-43P-201ENST00000384302 107 ntBASIC-1.09□□□□□ -2.58
TRAV21A0A0B4J279 SNORA3B-201ENST00000391305 131 ntBASIC-1.09□□□□□ -2.58
TRAV21A0A0B4J279 MIR548L-201ENST00000408303 86 ntBASIC-1.09□□□□□ -2.58
TRAV21A0A0B4J279 RNU6-1245P-201ENST00000411130 106 ntBASIC-1.09□□□□□ -2.58
TRAV21A0A0B4J279 MTCO1P20-201ENST00000425366 358 ntBASIC-1.09□□□□□ -2.58
TRAV21A0A0B4J279 USP9YP11-201ENST00000427537 717 ntBASIC-1.09□□□□□ -2.58
TRAV21A0A0B4J279 MTCO1P5-201ENST00000433573 344 ntBASIC-1.09□□□□□ -2.58
TRAV21A0A0B4J279 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-1.09□□□□□ -2.58
TRAV21A0A0B4J279 SNORA14.1-201ENST00000516113 141 ntBASIC-1.09□□□□□ -2.58
TRAV21A0A0B4J279 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-1.09□□□□□ -2.58
TRAV21A0A0B4J279 MIR4771-2-201ENST00000577758 74 ntBASIC-1.09□□□□□ -2.58
TRAV21A0A0B4J279 MIR4771-1-201ENST00000582617 74 ntBASIC-1.09□□□□□ -2.58
TRAV21A0A0B4J279 AL590491.3-201ENST00000610731 82 ntBASIC-1.09□□□□□ -2.58
TRAV21A0A0B4J279 AC005332.6-201ENST00000613178 446 ntBASIC-1.09□□□□□ -2.58
TRAV21A0A0B4J279 AC107905.1-201ENST00000616204 426 ntBASIC-1.09□□□□□ -2.58
TRAV21A0A0B4J279 AC026585.1-201ENST00000619582 524 ntBASIC-1.09□□□□□ -2.58
TRAV21A0A0B4J279 AL136221.1-201ENST00000621449 509 ntBASIC-1.09□□□□□ -2.58
TRAV21A0A0B4J279 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 MIR148A-201ENST00000362215 68 ntBASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 Z95118.1-201ENST00000421372 247 ntBASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 MTCO2P23-201ENST00000425216 680 ntBASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 AC078809.1-201ENST00000427601 140 ntBASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 SUMO1P2-201ENST00000452524 304 ntBASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 AC013470.1-201ENST00000453438 462 ntBASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 MTND2P6-201ENST00000455337 1030 ntBASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 AC093899.1-201ENST00000457984 376 ntBASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 AC107297.1-201ENST00000459991 176 ntBASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 RPS29P27-201ENST00000463711 170 ntBASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 MTCO3P27-201ENST00000514397 196 ntBASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 RNU6-138P-201ENST00000515952 107 ntBASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 RNU6-1232P-201ENST00000516299 86 ntBASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 MIR2115-201ENST00000516657 100 ntBASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 RNU7-28P-201ENST00000516759 62 ntBASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 AP001328.1-201ENST00000528550 176 ntBASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 CR383656.4-201ENST00000546909 122 ntBASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 MIR3681-201ENST00000580089 72 ntBASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 AC087685.1-201ENST00000587507 141 ntBASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 VN1R87P-201ENST00000596706 487 ntBASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 Z99289.3-201ENST00000605586 594 ntBASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 AC010999.1-201ENST00000611856 324 ntBASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1.1□□□□□ -2.59
TRAV21A0A0B4J279 MIRLET7C-201ENST00000362160 84 ntBASIC-1.11□□□□□ -2.59
TRAV21A0A0B4J279 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.11□□□□□ -2.59
TRAV21A0A0B4J279 RNU6-580P-201ENST00000365159 107 ntBASIC-1.11□□□□□ -2.59
TRAV21A0A0B4J279 RNA5SP117-201ENST00000365294 118 ntBASIC-1.11□□□□□ -2.59
TRAV21A0A0B4J279 RNU6-1126P-201ENST00000384002 107 ntBASIC-1.11□□□□□ -2.59
TRAV21A0A0B4J279 MTND4P24-201ENST00000424002 397 ntBASIC-1.11□□□□□ -2.59
TRAV21A0A0B4J279 AC010975.2-201ENST00000427781 588 ntBASIC-1.11□□□□□ -2.59
TRAV21A0A0B4J279 MTND1P4-201ENST00000435196 415 ntBASIC-1.11□□□□□ -2.59
TRAV21A0A0B4J279 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-1.11□□□□□ -2.59
TRAV21A0A0B4J279 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.11□□□□□ -2.59
TRAV21A0A0B4J279 RNU6-583P-201ENST00000516012 92 ntBASIC-1.11□□□□□ -2.59
TRAV21A0A0B4J279 RNU7-99P-201ENST00000516271 62 ntBASIC-1.11□□□□□ -2.59
TRAV21A0A0B4J279 SNORA18.7-201ENST00000516910 131 ntBASIC-1.11□□□□□ -2.59
TRAV21A0A0B4J279 SNORA74.3-201ENST00000517108 154 ntBASIC-1.11□□□□□ -2.59
TRAV21A0A0B4J279 IGKV1-22-201ENST00000524313 326 ntBASIC-1.11□□□□□ -2.59
TRAV21A0A0B4J279 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-1.11□□□□□ -2.59
TRAV21A0A0B4J279 NAMPTP3-201ENST00000569273 224 ntBASIC-1.11□□□□□ -2.59
TRAV21A0A0B4J279 AC010525.2-201ENST00000590920 195 ntBASIC-1.11□□□□□ -2.59
TRAV21A0A0B4J279 AC174048.1-201ENST00000603389 144 ntBASIC-1.11□□□□□ -2.59
TRAV21A0A0B4J279 AL442067.1-201ENST00000613261 223 ntBASIC-1.11□□□□□ -2.59
TRAV21A0A0B4J279 AC005520.5-201ENST00000613926 164 ntBASIC-1.11□□□□□ -2.59
TRAV21A0A0B4J279 AL008636.1-201ENST00000625038 1018 ntBASIC-1.11□□□□□ -2.59
TRAV21A0A0B4J279 RNA5SP368-201ENST00000364298 116 ntBASIC-1.12□□□□□ -2.59
TRAV21A0A0B4J279 RNU5E-7P-201ENST00000365290 117 ntBASIC-1.12□□□□□ -2.59
TRAV21A0A0B4J279 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-1.12□□□□□ -2.59
TRAV21A0A0B4J279 AL355143.1-201ENST00000407101 841 ntBASIC-1.12□□□□□ -2.59
TRAV21A0A0B4J279 RNU2-3P-201ENST00000410144 191 ntBASIC-1.12□□□□□ -2.59
TRAV21A0A0B4J279 RNU6-1186P-201ENST00000410429 97 ntBASIC-1.12□□□□□ -2.59
TRAV21A0A0B4J279 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-1.12□□□□□ -2.59
TRAV21A0A0B4J279 AC015818.7-201ENST00000428754 109 ntBASIC-1.12□□□□□ -2.59
TRAV21A0A0B4J279 AC087499.7-201ENST00000441958 109 ntBASIC-1.12□□□□□ -2.59
TRAV21A0A0B4J279 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.12□□□□□ -2.59
TRAV21A0A0B4J279 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-1.12□□□□□ -2.59
TRAV21A0A0B4J279 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-1.12□□□□□ -2.59
TRAV21A0A0B4J279 AL139286.2-201ENST00000606838 396 ntBASIC-1.12□□□□□ -2.59
TRAV21A0A0B4J279 AC091304.9-201ENST00000612091 226 ntBASIC-1.12□□□□□ -2.59
TRAV21A0A0B4J279 AC104260.1-201ENST00000616660 539 ntBASIC-1.12□□□□□ -2.59
TRAV21A0A0B4J279 MIR6514-201ENST00000622549 70 ntBASIC-1.12□□□□□ -2.59
TRAV21A0A0B4J279 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-1.13□□□□□ -2.59
TRAV21A0A0B4J279 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-1.13□□□□□ -2.59
TRAV21A0A0B4J279 SNORD95.1-201ENST00000364099 68 ntBASIC-1.13□□□□□ -2.59
TRAV21A0A0B4J279 RNU6-811P-201ENST00000384069 107 ntBASIC-1.13□□□□□ -2.59
TRAV21A0A0B4J279 MIR196A1-201ENST00000388006 70 ntBASIC-1.13□□□□□ -2.59
TRAV21A0A0B4J279 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-1.13□□□□□ -2.59
TRAV21A0A0B4J279 AL049829.1-201ENST00000465411 156 ntBASIC-1.13□□□□□ -2.59
TRAV21A0A0B4J279 SLC2A13P1-201ENST00000531560 322 ntBASIC-1.13□□□□□ -2.59
TRAV21A0A0B4J279 ZNF971P-201ENST00000562068 1249 ntBASIC-1.13□□□□□ -2.59
TRAV21A0A0B4J279 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-1.13□□□□□ -2.59
TRAV21A0A0B4J279 AC020891.4-201ENST00000605745 93 ntBASIC-1.13□□□□□ -2.59
TRAV21A0A0B4J279 FRG1KP-201ENST00000623592 341 ntBASIC-1.13□□□□□ -2.59
TRAV21A0A0B4J279 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC-1.13□□□□□ -2.59
TRAV21A0A0B4J279 MIR6828-201ENST00000636181 60 ntBASIC-1.13□□□□□ -2.59
TRAV21A0A0B4J279 MIR377-201ENST00000362145 69 ntBASIC-1.14□□□□□ -2.59
TRAV21A0A0B4J279 MIR655-201ENST00000362159 97 ntBASIC-1.14□□□□□ -2.59
TRAV21A0A0B4J279 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms