Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC005771.1-201ENST00000585581 349 ntBASIC-0.03□□□□□ -2.41
TRAV27A0A087WT01 AC011712.1-201ENST00000588959 234 ntBASIC-0.03□□□□□ -2.41
TRAV27A0A087WT01 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.03□□□□□ -2.41
TRAV27A0A087WT01 uc_338.34-201ENST00000617467 174 ntBASIC-0.03□□□□□ -2.41
TRAV27A0A087WT01 AC005592.1-201ENST00000566527 1640 ntBASIC-0.03□□□□□ -2.41
TRAV27A0A087WT01 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.04□□□□□ -2.42
TRAV27A0A087WT01 RNU6-169P-201ENST00000365336 107 ntBASIC-0.04□□□□□ -2.42
TRAV27A0A087WT01 MIR193B-201ENST00000384907 83 ntBASIC-0.04□□□□□ -2.42
TRAV27A0A087WT01 SNORD70.1-201ENST00000391007 85 ntBASIC-0.04□□□□□ -2.42
TRAV27A0A087WT01 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.04□□□□□ -2.42
TRAV27A0A087WT01 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-0.04□□□□□ -2.42
TRAV27A0A087WT01 MTND4LP16-201ENST00000440828 295 ntBASIC-0.04□□□□□ -2.42
TRAV27A0A087WT01 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.04□□□□□ -2.42
TRAV27A0A087WT01 FRG2DP-202ENST00000566967 323 ntBASIC-0.04□□□□□ -2.42
TRAV27A0A087WT01 AC068790.2-201ENST00000602601 557 ntBASIC-0.04□□□□□ -2.42
TRAV27A0A087WT01 AL049777.1-201ENST00000622740 518 ntBASIC-0.04□□□□□ -2.42
TRAV27A0A087WT01 MIR6079-201ENST00000635807 62 ntBASIC-0.04□□□□□ -2.42
TRAV27A0A087WT01 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.05□□□□□ -2.42
TRAV27A0A087WT01 SNORD114-16-201ENST00000363044 70 ntBASIC-0.05□□□□□ -2.42
TRAV27A0A087WT01 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.05□□□□□ -2.42
TRAV27A0A087WT01 RNY1P4-201ENST00000384595 115 ntBASIC-0.05□□□□□ -2.42
TRAV27A0A087WT01 RNU6-636P-201ENST00000384598 107 ntBASIC-0.05□□□□□ -2.42
TRAV27A0A087WT01 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.05□□□□□ -2.42
TRAV27A0A087WT01 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-0.05□□□□□ -2.42
TRAV27A0A087WT01 EPS15P1-201ENST00000448836 336 ntBASIC-0.05□□□□□ -2.42
TRAV27A0A087WT01 MTCO3P10-201ENST00000455912 772 ntBASIC-0.05□□□□□ -2.42
TRAV27A0A087WT01 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.05□□□□□ -2.42
TRAV27A0A087WT01 Y_RNA.672-201ENST00000516289 104 ntBASIC-0.05□□□□□ -2.42
TRAV27A0A087WT01 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.05□□□□□ -2.42
TRAV27A0A087WT01 AP003168.1-201ENST00000530091 307 ntBASIC-0.05□□□□□ -2.42
TRAV27A0A087WT01 EIF1P4-201ENST00000572664 335 ntBASIC-0.05□□□□□ -2.42
TRAV27A0A087WT01 AC025449.1-201ENST00000603896 529 ntBASIC-0.05□□□□□ -2.42
TRAV27A0A087WT01 AC069431.2-201ENST00000604149 1099 ntBASIC-0.05□□□□□ -2.42
TRAV27A0A087WT01 AL162730.1-201ENST00000605734 292 ntBASIC-0.05□□□□□ -2.42
TRAV27A0A087WT01 AC007684.1-201ENST00000609671 477 ntBASIC-0.05□□□□□ -2.42
TRAV27A0A087WT01 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.05□□□□□ -2.42
TRAV27A0A087WT01 AC139792.3-201ENST00000623525 224 ntBASIC-0.05□□□□□ -2.42
TRAV27A0A087WT01 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
TRAV27A0A087WT01 MIR411-201ENST00000362239 96 ntBASIC-0.06□□□□□ -2.42
TRAV27A0A087WT01 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.06□□□□□ -2.42
TRAV27A0A087WT01 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.06□□□□□ -2.42
TRAV27A0A087WT01 RNU6-434P-201ENST00000384376 107 ntBASIC-0.06□□□□□ -2.42
TRAV27A0A087WT01 MIR573-201ENST00000384964 99 ntBASIC-0.06□□□□□ -2.42
TRAV27A0A087WT01 MIR613-201ENST00000385248 95 ntBASIC-0.06□□□□□ -2.42
TRAV27A0A087WT01 SNORD111-201ENST00000408139 94 ntBASIC-0.06□□□□□ -2.42
TRAV27A0A087WT01 AC104850.1-201ENST00000435940 476 ntBASIC-0.06□□□□□ -2.42
TRAV27A0A087WT01 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.06□□□□□ -2.42
TRAV27A0A087WT01 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.06□□□□□ -2.42
TRAV27A0A087WT01 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.06□□□□□ -2.42
TRAV27A0A087WT01 RNU2-56P-201ENST00000516826 190 ntBASIC-0.06□□□□□ -2.42
TRAV27A0A087WT01 RNU6-58P-201ENST00000517143 103 ntBASIC-0.06□□□□□ -2.42
TRAV27A0A087WT01 AC022523.2-201ENST00000561045 150 ntBASIC-0.06□□□□□ -2.42
TRAV27A0A087WT01 AGGF1P4-201ENST00000568249 801 ntBASIC-0.06□□□□□ -2.42
TRAV27A0A087WT01 AC138749.5-201ENST00000611461 208 ntBASIC-0.06□□□□□ -2.42
TRAV27A0A087WT01 AC092634.7-201ENST00000621022 103 ntBASIC-0.06□□□□□ -2.42
TRAV27A0A087WT01 SCARNA4-201ENST00000629045 128 ntBASIC-0.06□□□□□ -2.42
TRAV27A0A087WT01 MIR4315-1-201ENST00000636800 73 ntBASIC-0.06□□□□□ -2.42
TRAV27A0A087WT01 MIR4315-2-201ENST00000640925 73 ntBASIC-0.06□□□□□ -2.42
TRAV27A0A087WT01 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.06□□□□□ -2.42
TRAV27A0A087WT01 MIRLET7C-201ENST00000362160 84 ntBASIC-0.07□□□□□ -2.42
TRAV27A0A087WT01 SNORA42.1-201ENST00000363515 137 ntBASIC-0.07□□□□□ -2.42
TRAV27A0A087WT01 RNU6-137P-201ENST00000363680 108 ntBASIC-0.07□□□□□ -2.42
TRAV27A0A087WT01 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.07□□□□□ -2.42
TRAV27A0A087WT01 AL355143.1-201ENST00000407101 841 ntBASIC-0.07□□□□□ -2.42
TRAV27A0A087WT01 RNU4-46P-201ENST00000410818 138 ntBASIC-0.07□□□□□ -2.42
TRAV27A0A087WT01 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.07□□□□□ -2.42
TRAV27A0A087WT01 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.07□□□□□ -2.42
TRAV27A0A087WT01 HMGN2P26-201ENST00000463169 339 ntBASIC-0.07□□□□□ -2.42
TRAV27A0A087WT01 AC007215.1-201ENST00000464893 276 ntBASIC-0.07□□□□□ -2.42
TRAV27A0A087WT01 MTND1P22-201ENST00000510572 951 ntBASIC-0.07□□□□□ -2.42
TRAV27A0A087WT01 RN7SKP164-201ENST00000516138 266 ntBASIC-0.07□□□□□ -2.42
TRAV27A0A087WT01 RNU6-612P-201ENST00000516909 102 ntBASIC-0.07□□□□□ -2.42
TRAV27A0A087WT01 AC090572.1-201ENST00000519251 160 ntBASIC-0.07□□□□□ -2.42
TRAV27A0A087WT01 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.07□□□□□ -2.42
TRAV27A0A087WT01 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.07□□□□□ -2.42
TRAV27A0A087WT01 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-0.07□□□□□ -2.42
TRAV27A0A087WT01 MIR4438-201ENST00000585271 93 ntBASIC-0.07□□□□□ -2.42
TRAV27A0A087WT01 RNU6-85P-201ENST00000605989 107 ntBASIC-0.07□□□□□ -2.42
TRAV27A0A087WT01 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.07□□□□□ -2.42
TRAV27A0A087WT01 AC009878.1-201ENST00000621819 340 ntBASIC-0.07□□□□□ -2.42
TRAV27A0A087WT01 MIR371B-201ENST00000638082 66 ntBASIC-0.07□□□□□ -2.42
TRAV27A0A087WT01 AC099654.13-201ENST00000639774 207 ntBASIC-0.07□□□□□ -2.42
TRAV27A0A087WT01 MIR18A-201ENST00000362310 71 ntBASIC-0.08□□□□□ -2.42
TRAV27A0A087WT01 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.08□□□□□ -2.42
TRAV27A0A087WT01 AC073261.1-201ENST00000429409 121 ntBASIC-0.08□□□□□ -2.42
TRAV27A0A087WT01 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.08□□□□□ -2.42
TRAV27A0A087WT01 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.08□□□□□ -2.42
TRAV27A0A087WT01 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.08□□□□□ -2.42
TRAV27A0A087WT01 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.08□□□□□ -2.42
TRAV27A0A087WT01 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.08□□□□□ -2.42
TRAV27A0A087WT01 AC093534.1-201ENST00000504977 132 ntBASIC-0.08□□□□□ -2.42
TRAV27A0A087WT01 AC074133.1-201ENST00000515696 183 ntBASIC-0.08□□□□□ -2.42
TRAV27A0A087WT01 RNU6-344P-201ENST00000516635 111 ntBASIC-0.08□□□□□ -2.42
TRAV27A0A087WT01 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.08□□□□□ -2.42
TRAV27A0A087WT01 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.08□□□□□ -2.42
TRAV27A0A087WT01 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.08□□□□□ -2.42
TRAV27A0A087WT01 AC027288.2-201ENST00000553028 243 ntBASIC-0.08□□□□□ -2.42
TRAV27A0A087WT01 MIR4775-201ENST00000581168 75 ntBASIC-0.08□□□□□ -2.42
TRAV27A0A087WT01 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.08□□□□□ -2.42
TRAV27A0A087WT01 RMST_3.1-201ENST00000611651 109 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms