Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb2S4R1M3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb2S4R1M3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.11■□□□□ 0.17
H2afb2S4R1M3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb2S4R1M3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.11■□□□□ 0.17
H2afb2S4R1M3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb2S4R1M3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Gm11950-201ENSMUST00000121615 838 ntBASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Dancr-204ENSMUST00000132389 2347 ntBASIC16.1■□□□□ 0.17
H2afb2S4R1M3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb2S4R1M3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb2S4R1M3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb2S4R1M3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
H2afb2S4R1M3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb2S4R1M3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb2S4R1M3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
H2afb2S4R1M3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
H2afb2S4R1M3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb2S4R1M3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb2S4R1M3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb2S4R1M3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb2S4R1M3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb2S4R1M3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb2S4R1M3 AA414768-201ENSMUST00000121924 1257 ntBASIC16.09■□□□□ 0.17
H2afb2S4R1M3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb2S4R1M3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb2S4R1M3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
H2afb2S4R1M3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.09■□□□□ 0.17
H2afb2S4R1M3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.09■□□□□ 0.17
H2afb2S4R1M3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb2S4R1M3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
H2afb2S4R1M3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb2S4R1M3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb2S4R1M3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb2S4R1M3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
H2afb2S4R1M3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.08■□□□□ 0.17
H2afb2S4R1M3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
H2afb2S4R1M3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
H2afb2S4R1M3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb2S4R1M3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb2S4R1M3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
H2afb2S4R1M3 Gm29518-201ENSMUST00000190858 372 ntBASIC16.08■□□□□ 0.16
H2afb2S4R1M3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.08■□□□□ 0.16
H2afb2S4R1M3 Gm17808-201ENSMUST00000200859 894 ntBASIC16.08■□□□□ 0.16
H2afb2S4R1M3 Gm45328-201ENSMUST00000210942 917 ntBASIC16.08■□□□□ 0.16
H2afb2S4R1M3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb2S4R1M3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb2S4R1M3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb2S4R1M3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb2S4R1M3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb2S4R1M3 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb2S4R1M3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb2S4R1M3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb2S4R1M3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb2S4R1M3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb2S4R1M3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms