Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm2274-201ENSMUST00000184539 609 ntBASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Gm5417-201ENSMUST00000079706 384 ntBASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb1S4R1E0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Phf7-203ENSMUST00000226565 1971 ntBASIC14.6□□□□□ -0.07
H2afb1S4R1E0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
H2afb1S4R1E0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Gm16061-201ENSMUST00000122167 857 ntBASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Gm30025-201ENSMUST00000218555 728 ntBASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb1S4R1E0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
H2afb1S4R1E0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
H2afb1S4R1E0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
H2afb1S4R1E0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
H2afb1S4R1E0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
H2afb1S4R1E0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
H2afb1S4R1E0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms