Protein–RNA interactions for Protein: Q9Z2M6

Ubl3, Ubiquitin-like protein 3, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubl3Q9Z2M6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Gm7977-201ENSMUST00000193787 748 ntBASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ubl3Q9Z2M6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ubl3Q9Z2M6 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.33□□□□□ -0.11
Ubl3Q9Z2M6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ubl3Q9Z2M6 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ubl3Q9Z2M6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Mir770-201ENSMUST00000103252 94 ntBASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Gm6623-201ENSMUST00000173570 544 ntBASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ubl3Q9Z2M6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ubl3Q9Z2M6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.31□□□□□ -0.12
Ubl3Q9Z2M6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms