Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Phf1Q9Z1B8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Phf1Q9Z1B8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Phf1Q9Z1B8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Mzt1-203ENSMUST00000227948 952 ntBASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Phf1Q9Z1B8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Phf1Q9Z1B8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Phf1Q9Z1B8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Phf1Q9Z1B8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Phf1Q9Z1B8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Phf1Q9Z1B8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Phf1Q9Z1B8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Phf1Q9Z1B8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Phf1Q9Z1B8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Phf1Q9Z1B8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Phf1Q9Z1B8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Phf1Q9Z1B8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.77□□□□□ -0.05
Phf1Q9Z1B8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.77□□□□□ -0.05
Phf1Q9Z1B8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Phf1Q9Z1B8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Phf1Q9Z1B8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Phf1Q9Z1B8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Phf1Q9Z1B8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.77□□□□□ -0.05
Phf1Q9Z1B8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms