Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Smarcb1Q9Z0H3 Gm6550-201ENSMUST00000187574 993 ntBASIC16.64■□□□□ 0.25
Smarcb1Q9Z0H3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcb1Q9Z0H3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.64■□□□□ 0.25
Smarcb1Q9Z0H3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcb1Q9Z0H3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcb1Q9Z0H3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcb1Q9Z0H3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcb1Q9Z0H3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcb1Q9Z0H3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcb1Q9Z0H3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcb1Q9Z0H3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Smarcb1Q9Z0H3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcb1Q9Z0H3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcb1Q9Z0H3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcb1Q9Z0H3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcb1Q9Z0H3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Smarcb1Q9Z0H3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcb1Q9Z0H3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Smarcb1Q9Z0H3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcb1Q9Z0H3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcb1Q9Z0H3 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.63■□□□□ 0.25
Smarcb1Q9Z0H3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcb1Q9Z0H3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcb1Q9Z0H3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcb1Q9Z0H3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcb1Q9Z0H3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcb1Q9Z0H3 Gm15173-201ENSMUST00000122049 433 ntBASIC16.63■□□□□ 0.25
Smarcb1Q9Z0H3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcb1Q9Z0H3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Smarcb1Q9Z0H3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcb1Q9Z0H3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Smarcb1Q9Z0H3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcb1Q9Z0H3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcb1Q9Z0H3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcb1Q9Z0H3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcb1Q9Z0H3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcb1Q9Z0H3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcb1Q9Z0H3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcb1Q9Z0H3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcb1Q9Z0H3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcb1Q9Z0H3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcb1Q9Z0H3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 Gm6257-201ENSMUST00000163864 910 ntBASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smarcb1Q9Z0H3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcb1Q9Z0H3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcb1Q9Z0H3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smarcb1Q9Z0H3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Smarcb1Q9Z0H3 Gm8344-201ENSMUST00000119813 856 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms