Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Gm6623-201ENSMUST00000173570 544 ntBASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClcnkaQ9WUB7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClcnkaQ9WUB7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClcnkaQ9WUB7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClcnkaQ9WUB7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClcnkaQ9WUB7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ClcnkaQ9WUB7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.82□□□□□ -0.04
ClcnkaQ9WUB7 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.82□□□□□ -0.04
ClcnkaQ9WUB7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ClcnkaQ9WUB7 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.82□□□□□ -0.04
ClcnkaQ9WUB7 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClcnkaQ9WUB7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClcnkaQ9WUB7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
ClcnkaQ9WUB7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClcnkaQ9WUB7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClcnkaQ9WUB7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClcnkaQ9WUB7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.82□□□□□ -0.04
ClcnkaQ9WUB7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ClcnkaQ9WUB7 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClcnkaQ9WUB7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ClcnkaQ9WUB7 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.82□□□□□ -0.04
ClcnkaQ9WUB7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Gm6345-202ENSMUST00000180900 204 ntBASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClcnkaQ9WUB7 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ClcnkaQ9WUB7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClcnkaQ9WUB7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClcnkaQ9WUB7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
ClcnkaQ9WUB7 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
ClcnkaQ9WUB7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ClcnkaQ9WUB7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClcnkaQ9WUB7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ClcnkaQ9WUB7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClcnkaQ9WUB7 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClcnkaQ9WUB7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClcnkaQ9WUB7 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClcnkaQ9WUB7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.8□□□□□ -0.04
ClcnkaQ9WUB7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClcnkaQ9WUB7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms