Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RpgrQ9R0X5 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RpgrQ9R0X5 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RpgrQ9R0X5 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Gm10231-201ENSMUST00000181584 441 ntBASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Gm10175-202ENSMUST00000208752 441 ntBASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RpgrQ9R0X5 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Gm18115-201ENSMUST00000221209 621 ntBASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Actl10-202ENSMUST00000226583 1501 ntBASIC16.35■□□□□ 0.21
RpgrQ9R0X5 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Gm26039-201ENSMUST00000158152 144 ntBASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Gm18032-201ENSMUST00000222541 538 ntBASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RpgrQ9R0X5 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RpgrQ9R0X5 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms