Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nubp2Q9R061 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nubp2Q9R061 Gm10819-201ENSMUST00000099988 561 ntBASIC14.29□□□□□ -0.12
Nubp2Q9R061 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nubp2Q9R061 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Nubp2Q9R061 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nubp2Q9R061 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nubp2Q9R061 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nubp2Q9R061 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.29□□□□□ -0.12
Nubp2Q9R061 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nubp2Q9R061 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.29□□□□□ -0.12
Nubp2Q9R061 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.29□□□□□ -0.12
Nubp2Q9R061 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nubp2Q9R061 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nubp2Q9R061 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nubp2Q9R061 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Nubp2Q9R061 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nubp2Q9R061 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nubp2Q9R061 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp2Q9R061 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nubp2Q9R061 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp2Q9R061 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp2Q9R061 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp2Q9R061 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp2Q9R061 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp2Q9R061 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.28□□□□□ -0.12
Nubp2Q9R061 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp2Q9R061 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.28□□□□□ -0.12
Nubp2Q9R061 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.28□□□□□ -0.12
Nubp2Q9R061 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.28□□□□□ -0.12
Nubp2Q9R061 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp2Q9R061 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp2Q9R061 Gm17808-201ENSMUST00000200859 894 ntBASIC14.28□□□□□ -0.12
Nubp2Q9R061 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.28□□□□□ -0.12
Nubp2Q9R061 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp2Q9R061 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp2Q9R061 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp2Q9R061 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp2Q9R061 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp2Q9R061 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp2Q9R061 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp2Q9R061 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp2Q9R061 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp2Q9R061 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Nubp2Q9R061 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nubp2Q9R061 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Nubp2Q9R061 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Nubp2Q9R061 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Nubp2Q9R061 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nubp2Q9R061 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.27□□□□□ -0.12
Nubp2Q9R061 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nubp2Q9R061 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nubp2Q9R061 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nubp2Q9R061 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nubp2Q9R061 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Nubp2Q9R061 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.27□□□□□ -0.12
Nubp2Q9R061 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nubp2Q9R061 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Nubp2Q9R061 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.27□□□□□ -0.13
Nubp2Q9R061 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nubp2Q9R061 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.27□□□□□ -0.13
Nubp2Q9R061 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nubp2Q9R061 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.27□□□□□ -0.13
Nubp2Q9R061 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nubp2Q9R061 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nubp2Q9R061 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nubp2Q9R061 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nubp2Q9R061 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nubp2Q9R061 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nubp2Q9R061 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Nubp2Q9R061 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nubp2Q9R061 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nubp2Q9R061 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
Nubp2Q9R061 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nubp2Q9R061 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nubp2Q9R061 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nubp2Q9R061 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp2Q9R061 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp2Q9R061 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp2Q9R061 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp2Q9R061 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp2Q9R061 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp2Q9R061 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp2Q9R061 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp2Q9R061 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.26□□□□□ -0.13
Nubp2Q9R061 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp2Q9R061 Gm11950-201ENSMUST00000121615 838 ntBASIC14.26□□□□□ -0.13
Nubp2Q9R061 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.26□□□□□ -0.13
Nubp2Q9R061 Gm6623-201ENSMUST00000173570 544 ntBASIC14.26□□□□□ -0.13
Nubp2Q9R061 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp2Q9R061 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp2Q9R061 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp2Q9R061 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Nubp2Q9R061 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nubp2Q9R061 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp2Q9R061 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp2Q9R061 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp2Q9R061 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nubp2Q9R061 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.26□□□□□ -0.13
Nubp2Q9R061 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms