Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Msh5Q9QUM7 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh5Q9QUM7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh5Q9QUM7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Msh5Q9QUM7 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh5Q9QUM7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Msh5Q9QUM7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Msh5Q9QUM7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh5Q9QUM7 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Gm13186-201ENSMUST00000118031 316 ntBASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Gm14542-201ENSMUST00000118460 1248 ntBASIC16.48■□□□□ 0.23
Msh5Q9QUM7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Gm22923-201ENSMUST00000174952 110 ntBASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Gm10566-201ENSMUST00000086739 996 ntBASIC16.48■□□□□ 0.23
Msh5Q9QUM7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh5Q9QUM7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh5Q9QUM7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Msh5Q9QUM7 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Msh5Q9QUM7 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh5Q9QUM7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Msh5Q9QUM7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Msh5Q9QUM7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh5Q9QUM7 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh5Q9QUM7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh5Q9QUM7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh5Q9QUM7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh5Q9QUM7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Msh5Q9QUM7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Msh5Q9QUM7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Msh5Q9QUM7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Msh5Q9QUM7 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Msh5Q9QUM7 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC16.47■□□□□ 0.23
Msh5Q9QUM7 Gm29107-201ENSMUST00000190910 347 ntBASIC16.47■□□□□ 0.23
Msh5Q9QUM7 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC16.47■□□□□ 0.23
Msh5Q9QUM7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh5Q9QUM7 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh5Q9QUM7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh5Q9QUM7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh5Q9QUM7 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Msh5Q9QUM7 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh5Q9QUM7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Gm25318-201ENSMUST00000122554 314 ntBASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Gm38313-201ENSMUST00000191953 1266 ntBASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Msh5Q9QUM7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Gm42535-201ENSMUST00000197312 1399 ntBASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh5Q9QUM7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.46■□□□□ 0.22
Msh5Q9QUM7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Msh5Q9QUM7 Phf7-203ENSMUST00000226565 1971 ntBASIC16.46■□□□□ 0.22
Msh5Q9QUM7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.22
Msh5Q9QUM7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Msh5Q9QUM7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
Msh5Q9QUM7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.45■□□□□ 0.22
Msh5Q9QUM7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms