Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1fQ9JIS7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1fQ9JIS7 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1fQ9JIS7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
Cacna1fQ9JIS7 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1fQ9JIS7 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cacna1fQ9JIS7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1fQ9JIS7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cacna1fQ9JIS7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.16■□□□□ 0.5
Cacna1fQ9JIS7 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1fQ9JIS7 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cacna1fQ9JIS7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.16■□□□□ 0.5
Cacna1fQ9JIS7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1fQ9JIS7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1fQ9JIS7 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.16■□□□□ 0.5
Cacna1fQ9JIS7 Gm11745-201ENSMUST00000121669 448 ntBASIC18.16■□□□□ 0.5
Cacna1fQ9JIS7 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.16■□□□□ 0.5
Cacna1fQ9JIS7 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.16■□□□□ 0.5
Cacna1fQ9JIS7 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1fQ9JIS7 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1fQ9JIS7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1fQ9JIS7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1fQ9JIS7 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.16■□□□□ 0.5
Cacna1fQ9JIS7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cacna1fQ9JIS7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cacna1fQ9JIS7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1fQ9JIS7 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1fQ9JIS7 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.15■□□□□ 0.5
Cacna1fQ9JIS7 Mir6956-201ENSMUST00000183598 62 ntBASIC18.15■□□□□ 0.5
Cacna1fQ9JIS7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1fQ9JIS7 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1fQ9JIS7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1fQ9JIS7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1fQ9JIS7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1fQ9JIS7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cacna1fQ9JIS7 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Cacna1fQ9JIS7 Mir6990-201ENSMUST00000183724 91 ntBASIC18.15■□□□□ 0.5
Cacna1fQ9JIS7 Gm7063-201ENSMUST00000186840 981 ntBASIC18.15■□□□□ 0.5
Cacna1fQ9JIS7 Gm10576-201ENSMUST00000191927 825 ntBASIC18.15■□□□□ 0.5
Cacna1fQ9JIS7 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.15■□□□□ 0.5
Cacna1fQ9JIS7 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.15■□□□□ 0.5
Cacna1fQ9JIS7 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cacna1fQ9JIS7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cacna1fQ9JIS7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cacna1fQ9JIS7 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1fQ9JIS7 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1fQ9JIS7 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1fQ9JIS7 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1fQ9JIS7 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.14■□□□□ 0.49
Cacna1fQ9JIS7 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.14■□□□□ 0.49
Cacna1fQ9JIS7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1fQ9JIS7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1fQ9JIS7 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.14■□□□□ 0.49
Cacna1fQ9JIS7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1fQ9JIS7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cacna1fQ9JIS7 Gm11025-201ENSMUST00000140773 466 ntBASIC18.13■□□□□ 0.49
Cacna1fQ9JIS7 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1fQ9JIS7 Thap2-203ENSMUST00000218989 527 ntBASIC18.13■□□□□ 0.49
Cacna1fQ9JIS7 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1fQ9JIS7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1fQ9JIS7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1fQ9JIS7 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1fQ9JIS7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1fQ9JIS7 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1fQ9JIS7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1fQ9JIS7 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cacna1fQ9JIS7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1fQ9JIS7 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.13■□□□□ 0.49
Cacna1fQ9JIS7 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1fQ9JIS7 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.13■□□□□ 0.49
Cacna1fQ9JIS7 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1fQ9JIS7 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1fQ9JIS7 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cacna1fQ9JIS7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1fQ9JIS7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1fQ9JIS7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1fQ9JIS7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cacna1fQ9JIS7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1fQ9JIS7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1fQ9JIS7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1fQ9JIS7 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1fQ9JIS7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1fQ9JIS7 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1fQ9JIS7 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1fQ9JIS7 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1fQ9JIS7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1fQ9JIS7 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cacna1fQ9JIS7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cacna1fQ9JIS7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.12■□□□□ 0.49
Cacna1fQ9JIS7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.11■□□□□ 0.49
Cacna1fQ9JIS7 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.11■□□□□ 0.49
Cacna1fQ9JIS7 Mir1895-201ENSMUST00000122615 79 ntBASIC18.11■□□□□ 0.49
Cacna1fQ9JIS7 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1fQ9JIS7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1fQ9JIS7 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1fQ9JIS7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Cacna1fQ9JIS7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.11■□□□□ 0.49
Cacna1fQ9JIS7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1fQ9JIS7 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cacna1fQ9JIS7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms