Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smco4Q9JIS3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smco4Q9JIS3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13□□□□□ -0.33
Smco4Q9JIS3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Smco4Q9JIS3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smco4Q9JIS3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Smco4Q9JIS3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smco4Q9JIS3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Smco4Q9JIS3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13□□□□□ -0.33
Smco4Q9JIS3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13□□□□□ -0.33
Smco4Q9JIS3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13□□□□□ -0.33
Smco4Q9JIS3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Smco4Q9JIS3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Smco4Q9JIS3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Smco4Q9JIS3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smco4Q9JIS3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smco4Q9JIS3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smco4Q9JIS3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smco4Q9JIS3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Smco4Q9JIS3 Gm37728-201ENSMUST00000195025 2292 ntBASIC13□□□□□ -0.33
Smco4Q9JIS3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13□□□□□ -0.33
Smco4Q9JIS3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Smco4Q9JIS3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Gm9959-201ENSMUST00000068277 390 ntBASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smco4Q9JIS3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.97□□□□□ -0.33
Smco4Q9JIS3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Smco4Q9JIS3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms